Homologs of Atu2077 from Agrobacterium fabrum C58

DNA polymerase III, epsilon subunit
SEED: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
KEGG: DNA polymerase III subunit epsilon

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu2077 DNA polymerase III, epsilon subunit insig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS11760 3'-5' exonuclease insig. 73 97
o Azospirillum brasilense Sp245 AZOBR_RS02965 DNA polymerase III subunit epsilon insig. 52 95
o Azospirillum sp. SherDot2 MPMX19_02042 3'-5' exonuclease DinG insig. 49 95
o Caulobacter crescentus NA1000 CCNA_01591 DNA polymerase III epsilon-like protein sig. 52 94
o Caulobacter crescentus NA1000 Δfur CCNA_01591 DNA polymerase III epsilon-like protein cofit 52 94
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07070 DNA polymerase III subunit epsilon insig. 38 91
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS12830 3'-5' exonuclease insig. 36 83
  Bacteroides stercoris CC31F HMPREF1181_RS01015 3'-5' exonuclease insig. 39 74
  Bacteroides ovatus ATCC 8483 BACOVA_00857 putative DNA polymerase III, epsilon subunit insig. 39 76
  Bacteroides thetaiotaomicron VPI-5482 BT1431 putative DNA polymerase III epsilon chain (NCBI ptt file) insig. 37 76
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01780 3'-5' exonuclease strong 36 74
  Phocaeicola dorei CL03T12C01 ABI39_RS15285 3'-5' exonuclease insig. 36 74
  Marinobacter adhaerens HP15 HP15_3043 DNA polymerase III, epsilon subunit cofit 31 71
  Shewanella sp. ANA-3 Shewana3_2251 DNA polymerase III, epsilon subunit (RefSeq) insig. 30 73
  Shewanella sp. ANA-3 Shewana3_2365 DNA polymerase III, epsilon subunit (RefSeq) no data 28 100
  Shewanella loihica PV-4 Shew_1871 DNA polymerase III, epsilon subunit (RefSeq) no data 28 80
  Escherichia coli ECOR38 HEPCGN_07905 dnaQ DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli ECRC100 OKFHMN_09965 dnaQ DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli ECRC101 MCAODC_00480 dnaQ DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli ECRC102 NIAGMN_07815 dnaQ DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli ECRC98 JDDGAC_13560 dnaQ DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli ECRC99 KEDOAH_18190 dnaQ DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli Nissle 1917 ECOLIN_RS01175 DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli BL21 ECD_00208 DNA polymerase III epsilon subunit no data 32 60
  Escherichia coli ECOR27 NOLOHH_02310 dnaQ DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli ECRC62 BNILDI_09360 dnaQ DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03446 DNA polymerase III subunit epsilon no data 32 60
  Escherichia coli BW25113 b0215 dnaQ DNA polymerase III subunit epsilon (NCBI) no data 32 60
  Enterobacter sp. TBS_079 MPMX20_00900 DNA polymerase III subunit epsilon no data 32 60
  Klebsiella michiganensis M5al BWI76_RS05455 DNA polymerase III subunit epsilon no data 31 60
  Mycobacterium tuberculosis H37Rv Rv3711c Probable DNA polymerase III (epsilon subunit) DnaQ insig. 27 80
  Escherichia fergusonii Becca EFB2_03828 DNA polymerase III subunit epsilon no data 31 60
  Magnetospirillum magneticum AMB-1 AMB_RS10350 DNA polymerase III subunit epsilon cofit 34 55
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2564 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 31 62
  Shewanella oneidensis MR-1 SO2245 dnaQ-1 DNA polymerase III, epsilon subunit (NCBI ptt file) sig. 30 67
  Enterobacter asburiae PDN3 EX28DRAFT_2679 DNA polymerase III, epsilon subunit, Proteobacterial no data 31 60
  Rahnella sp. WP5 EX31_RS00350 exodeoxyribonuclease X insig. 31 90
  Enterobacter sp. TBS_079 MPMX20_02751 Exodeoxyribonuclease 10 insig. 29 88
  Alteromonas macleodii MIT1002 MIT1002_03947 DNA polymerase III PolC-type insig. 29 83
  Shewanella oneidensis MR-1 SO2559 dnaQ-2 DNA polymerase III, epsilon subunit (NCBI ptt file) no data 33 60
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4047 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 30 60
  Fusobacterium nucleatum SB010 HUW76_02840 PolC-type DNA polymerase III no data 29 75
  Dickeya dianthicola ME23 DZA65_RS17250 DNA polymerase III subunit epsilon no data 27 78
  Acidovorax sp. GW101-3H11 Ac3H11_5015 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 33 66
  Dickeya dianthicola 67-19 HGI48_RS16165 DNA polymerase III subunit epsilon no data 27 78
  Enterobacter asburiae PDN3 EX28DRAFT_0710 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases insig. 29 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_11380 DNA polymerase III subunit epsilon no data 31 60
  Dickeya dadantii 3937 DDA3937_RS16045 DNA polymerase III subunit epsilon no data 27 78
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02300 DNA polymerase III subunit epsilon no data 31 81
  Ralstonia solanacearum UW163 UW163_RS11425 DNA polymerase III subunit epsilon no data 31 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 32 64
  Dechlorosoma suillum PS Dsui_0101 exonuclease, DNA polymerase III, epsilon subunit family cofit 28 73
  Pseudomonas syringae pv. syringae B728a Psyr_4300 DNA polymerase III, epsilon subunit insig. 31 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4300 DNA polymerase III, epsilon subunit insig. 31 66
  Serratia liquefaciens MT49 IAI46_04150 DNA polymerase III subunit epsilon no data 28 60
o Pseudomonas fluorescens FW300-N2E3 AO353_06275 DNA polymerase III subunit epsilon insig. 31 83
  Ralstonia sp. UNC404CL21Col ABZR87_RS14230 DNA polymerase III subunit epsilon no data 30 81
  Erwinia tracheiphila SCR3 LU632_RS01095 dnaQ DNA polymerase III subunit epsilon no data 31 60
  Klebsiella michiganensis M5al BWI76_RS18070 DNA polymerase III subunit epsilon insig. 29 88
  Rahnella sp. WP5 EX31_RS21175 DNA polymerase III subunit epsilon no data 28 60
  Pseudomonas sp. DMC3 GFF3922 DNA polymerase III PolC-type cofit 32 63
  Methylophilus sp. DMC18 GFF1760 3'-5' exonuclease DinG insig. 26 79
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2127 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 31 69
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1623 Exodeoxyribonuclease X (EC 3.1.11.-) insig. 29 79
  Pectobacterium carotovorum WPP14 HER17_RS05470 DNA polymerase III subunit epsilon no data 26 78
  Shewanella amazonensis SB2B Sama_1880 DNA-directed DNA polymerase (RefSeq) no data 33 56
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1406 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 32 63
  Ralstonia solanacearum GMI1000 RS_RS09455 DNA polymerase III subunit epsilon no data 30 81
  Escherichia coli BL21 ECD_01815 exodeoxyribonuclease 10; DNA exonuclease X insig. 30 79
  Dechlorosoma suillum PS Dsui_2481 DNA polymerase III, epsilon subunit no data 31 55
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13650 DNA polymerase III subunit epsilon no data 29 76
  Pseudomonas sp. SVBP6 COO64_RS15410 PolC-type DNA polymerase III insig. 32 76
o Pseudomonas simiae WCS417 PS417_24520 DNA polymerase III subunit epsilon sig. 32 85
  Ralstonia solanacearum PSI07 RPSI07_RS15070 DNA polymerase III subunit epsilon no data 29 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5043 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 32 63
  Cellulophaga baltica 18 M666_RS17600 exonuclease domain-containing protein insig. 25 65
o Pseudomonas fluorescens SBW25 PFLU_RS26455 3'-5' exonuclease insig. 31 87
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26455 3'-5' exonuclease insig. 31 87
  Escherichia coli ECRC62 BNILDI_15690 exoX exodeoxyribonuclease X cofit 29 79
  Pantoea sp. MT58 IAI47_15325 DNA polymerase III subunit epsilon no data 28 60
  Agrobacterium fabrum C58 Atu0005 DNA polymerase III, epsilon chain no data 33 49
  Pseudomonas fluorescens FW300-N2C3 AO356_15515 DNA polymerase III subunit epsilon insig. 32 63
  Escherichia fergusonii Becca EFB2_02100 Exodeoxyribonuclease 10 insig. 29 79
  Escherichia coli ECOR27 NOLOHH_16895 exoX exodeoxyribonuclease X insig. 29 79
  Escherichia coli ECOR38 HEPCGN_04785 exoX exodeoxyribonuclease X insig. 29 79
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01887 Exodeoxyribonuclease 10 insig. 29 79
  Escherichia coli Nissle 1917 ECOLIN_RS10265 exodeoxyribonuclease X no data 29 79
  Escherichia coli BW25113 b1844 exoX exodeoxyribonuclease X (NCBI) sig. 29 79
  Azospirillum brasilense Sp245 AZOBR_RS14205 exonuclease strong 31 73
  Magnetospirillum magneticum AMB-1 AMB_RS16575 DNA polymerase III subunit epsilon insig. 28 55
  Pseudomonas sp. RS175 PFR28_03828 DNA polymerase III PolC-type no data 32 66
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2733 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 31 63
  Sinorhizobium meliloti 1021 SMc02789 DNA polymerase III subunit epsilon no data 29 61
  Paraburkholderia sabiae LMG 24235 QEN71_RS03705 exonuclease domain-containing protein insig. 31 51
  Cupriavidus basilensis FW507-4G11 RR42_RS25820 DNA polymerase III subunit epsilon insig. 27 69
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03997 DNA polymerase-3 subunit epsilon insig. 32 50
  Castellaniella sp019104865 MT123 ABCV34_RS10470 DNA polymerase III subunit epsilon no data 30 61
  Pseudomonas aeruginosa PA14 IKLFDK_08830 DNA polymerase III subunit epsilon no data 33 57
  Pseudomonas sp. S08-1 OH686_03565 DNA polymerase III, epsilon subunit no data 33 57