Homologs of ABIE51_RS00300 from Lysobacter sp. OAE881

Tex family protein
SEED: Transcription accessory protein (S1 RNA-binding domain)
KEGG: uncharacterized protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Lysobacter sp. OAE881 ABIE51_RS00300 Tex family protein insig. 100 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2426.1 Transcription accessory protein (S1 RNA-binding domain) insig. 78 100
o Rhodanobacter sp. FW510-T8 OKGIIK_13735 tex RNA-binding transcriptional accessory protein insig. 72 99
o Rhodanobacter denitrificans MT42 LRK55_RS09820 Tex family protein cofit 71 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10180 RNA-binding transcriptional accessory protein insig. 71 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15750 Tex family protein sig. 74 92
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3906 Transcription accessory protein (S1 RNA-binding domain) strong 66 98
o Dechlorosoma suillum PS Dsui_2546 transcriptional accessory protein cofit 67 99
o Pseudomonas sp. S08-1 OH686_11100 Transcription accessory protein (S1 RNA-binding domain) cofit 66 99
o Pseudomonas simiae WCS417 PS417_01165 transcription accessory protein sig. 66 98
o Pseudomonas fluorescens SBW25 PFLU_RS01275 RNA-binding transcriptional accessory protein cofit 66 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS01275 RNA-binding transcriptional accessory protein insig. 66 98
o Pseudomonas fluorescens FW300-N2C3 AO356_10175 transcription accessory protein insig. 69 91
o Pseudomonas sp. RS175 PFR28_04867 Protein YhgF insig. 69 91
o Pseudomonas fluorescens FW300-N2E3 AO353_11740 DNA damage response protein (yhgF like) (from data) sig. 65 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_428 Transcription accessory protein (S1 RNA-binding domain) insig. 65 98
o Pseudomonas syringae pv. syringae B728a Psyr_0257 RNA binding S1 insig. 68 93
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0257 RNA binding S1 insig. 68 93
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1771 Transcription accessory protein (S1 RNA-binding domain) sig. 67 94
o Paraburkholderia graminis OAS925 ABIE53_002728 uncharacterized protein strong 66 99
o Burkholderia phytofirmans PsJN BPHYT_RS12510 RNA-binding protein insig. 69 92
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00530 uncharacterized protein insig. 68 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS13340 Tex family protein sig. 65 99
o Pseudomonas putida KT2440 PP_0245 putative transcriptional accessory protein insig. 68 91
o Pseudomonas stutzeri RCH2 Psest_3996 Transcriptional accessory protein strong 66 94
o Herbaspirillum seropedicae SmR1 HSERO_RS20945 RNA-binding protein sig. 67 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS06045 Tex family protein strong 66 99
o Ralstonia solanacearum GMI1000 RS_RS08180 RNA-binding transcriptional accessory protein insig. 66 96
o Ralstonia solanacearum PSI07 RPSI07_RS15945 RNA-binding transcriptional accessory protein sig. 67 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01545 RNA-binding transcriptional accessory protein insig. 67 96
o Ralstonia solanacearum UW163 UW163_RS14855 RNA-binding transcriptional accessory protein no data 67 96
o Azospirillum brasilense Sp245 AZOBR_RS14535 RNA-binding protein insig. 65 99
o Azospirillum sp. SherDot2 MPMX19_04277 Protein YhgF insig. 69 92
o Marinobacter adhaerens HP15 HP15_216 DNA damage response protein (yhgF like) (from data) sig. 65 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_13705 RNA-binding transcriptional accessory protein insig. 65 93
o Cupriavidus basilensis FW507-4G11 RR42_RS07565 transcription accessory protein strong 65 99
o Magnetospirillum magneticum AMB-1 AMB_RS17285 RNA-binding transcriptional accessory protein cofit 66 94
o Dickeya dadantii 3937 DDA3937_RS19635 RNA-binding transcriptional accessory protein sig. 63 98
o Escherichia coli ECOR27 NOLOHH_08815 yhgF Protein YhgF cofit 64 95
o Escherichia coli ECRC62 BNILDI_02705 yhgF Protein YhgF cofit 64 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00296 Protein YhgF cofit 64 95
o Escherichia coli BL21 ECD_03259 putative transcriptional accessory protein insig. 64 95
o Escherichia coli ECRC100 OKFHMN_17025 yhgF Protein YhgF cofit 64 95
o Escherichia coli ECRC101 MCAODC_07555 yhgF Protein YhgF cofit 64 95
o Escherichia coli ECRC102 NIAGMN_14795 yhgF Protein YhgF insig. 64 95
o Escherichia coli ECRC98 JDDGAC_20655 yhgF Protein YhgF cofit 64 95
o Escherichia coli ECRC99 KEDOAH_11115 yhgF Protein YhgF no data 64 95
o Escherichia coli ECOR38 HEPCGN_15835 yhgF Protein YhgF insig. 64 95
o Alteromonas macleodii MIT1002 MIT1002_04012 hypothetical protein insig. 62 96
o Escherichia coli Nissle 1917 ECOLIN_RS19465 Tex family protein sig. 64 95
o Escherichia coli BW25113 b3407 yhgF orf, hypothetical protein (VIMSS) sig. 64 95
o Escherichia fergusonii Becca EFB2_00421 Protein YhgF insig. 64 95
o Serratia liquefaciens MT49 IAI46_23800 RNA-binding transcriptional accessory protein insig. 63 98
o Pantoea sp. MT58 IAI47_01805 RNA-binding transcriptional accessory protein insig. 62 98
o Rhodopseudomonas palustris CGA009 TX73_003025 Tex family protein insig. 64 92
o Dickeya dianthicola ME23 DZA65_RS20860 RNA-binding transcriptional accessory protein insig. 63 98
o Klebsiella michiganensis M5al BWI76_RS26655 transcription accessory protein insig. 64 95
o Pectobacterium carotovorum WPP14 HER17_RS01615 RNA-binding transcriptional accessory protein cofit 62 98
o Dickeya dianthicola 67-19 HGI48_RS19770 RNA-binding transcriptional accessory protein insig. 62 98
o Enterobacter sp. TBS_079 MPMX20_04294 Protein YhgF insig. 63 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF611 Transcription accessory protein (S1 RNA-binding domain) insig. 63 95
o Rahnella sp. WP5 EX31_RS04840 RNA-binding transcriptional accessory protein insig. 62 96
o Kangiella aquimarina DSM 16071 B158DRAFT_0683 Transcriptional accessory protein strong 61 95
o Erwinia tracheiphila SCR3 LU632_RS22955 RNA-binding transcriptional accessory protein insig. 62 98
o Enterobacter asburiae PDN3 EX28DRAFT_4136 Transcriptional accessory protein insig. 65 91
o Shewanella loihica PV-4 Shew_3634 RNA-binding S1 domain-containing protein (RefSeq) sig. 60 99
o Castellaniella sp019104865 MT123 ABCV34_RS01870 Tex family protein insig. 65 92
o Acidovorax sp. GW101-3H11 Ac3H11_2501 Transcription accessory protein (S1 RNA-binding domain) no data 60 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4649 Transcription accessory protein (S1 RNA-binding domain) insig. 61 99
o Shewanella amazonensis SB2B Sama_3508 hypothetical protein (RefSeq) sig. 60 99
o Shewanella oneidensis MR-1 SO4629 conserved hypothetical protein (NCBI ptt file) sig. 60 99
o Shewanella sp. ANA-3 Shewana3_4013 RNA-binding S1 domain-containing protein (RefSeq) sig. 60 99
o Variovorax sp. OAS795 ABID97_RS15930 Tex family protein sig. 60 98
o Variovorax sp. SCN45 GFF2 Transcription accessory protein (S1 RNA-binding domain) cofit 59 98
o Rhizobium sp. OAE497 ABIE40_RS05475 Tex family protein insig. 62 94
o Phaeobacter inhibens DSM 17395 PGA1_c09850 S1 domain-containing protein insig. 59 99
o Agrobacterium fabrum C58 Atu0648 hypothetical protein insig. 62 93
o Sinorhizobium meliloti 1021 SMc02644 hypothetical protein insig. 60 99
o Acinetobacter radioresistens SK82 MPMX26_02837 Protein YhgF cofit 51 96
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02750 RNA-binding transcriptional accessory protein insig. 51 94
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3978 Transcriptional accessory protein insig. 50 90
o Bacteroides stercoris CC31F HMPREF1181_RS04035 RNA-binding transcriptional accessory protein insig. 49 90
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18880 RNA-binding transcriptional accessory protein insig. 48 93
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS21695 Tex family protein cofit 48 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU2246 S1 RNA binding domain protein (TIGR) insig. 49 91
o Bacteroides thetaiotaomicron VPI-5482 BT1238 putative RNA binding protein with S1 RNA-binding domain (NCBI ptt file) sig. 48 88
o Bacteroides ovatus ATCC 8483 BACOVA_00531 Tex-like protein N-terminal domain protein insig. 48 88
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS02415 Tex family protein insig. 47 91
o Desulfovibrio vulgaris Miyazaki F DvMF_0870 RNA binding S1 domain protein (RefSeq) insig. 50 88
o Phocaeicola dorei CL03T12C01 ABI39_RS14580 RNA-binding transcriptional accessory protein insig. 47 90
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18285 RNA-binding transcriptional accessory protein insig. 47 90
o Methanococcus maripaludis JJ MMJJ_RS08530 RNA-binding transcriptional accessory protein insig. 43 90
o Methanococcus maripaludis S2 MMP_RS05820 RNA-binding transcriptional accessory protein insig. 43 90
o Fusobacterium nucleatum SB010 HUW76_00320 RNA-binding transcriptional accessory protein cofit 42 91
  Bifidobacterium breve UCC2003 BBR_RS14275 30S ribosomal protein S1 insig. 51 11
  Mycobacterium tuberculosis H37Rv Rv1630 30S ribosomal protein S1 RpsA no data 41 13
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3668 SSU ribosomal protein S1p no data 45 9
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2381.1 SSU ribosomal protein S1p no data 51 9
  Escherichia coli BL21 ECD_00915 30S ribosomal subunit protein S1 no data 45 9
  Dickeya dadantii 3937 DDA3937_RS09685 30S ribosomal protein S1 no data 45 9