Homologs of Shew_0457 from Shewanella loihica PV-4

ATP-dependent helicase HepA (RefSeq)
SEED: RNA polymerase associated protein RapA (EC 3.6.1.-)
KEGG: ATP-dependent helicase HepA

188 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0457 ATP-dependent helicase HepA (RefSeq) sig. 100 100
o Shewanella oneidensis MR-1 SO0575 hepA RNA polymerase-associated protein HepA (NCBI ptt file) sig. 84 100
o Shewanella sp. ANA-3 Shewana3_0574 ATP-dependent helicase HepA (RefSeq) sig. 83 100
o Shewanella amazonensis SB2B Sama_3131 ATP-dependent helicase HepA (RefSeq) sig. 78 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_12705 RNA polymerase-associated protein RapA insig. 58 100
o Klebsiella pneumoniae MKP103 KDGMDA_12795 RNA polymerase-associated protein RapA sig. 58 100
o Klebsiella pneumoniae MRSN742743 KFA93_RS11265 rapA;go_function=ATP RNA polymerase-associated protein RapA cofit 58 100
o Klebsiella michiganensis M5al BWI76_RS04570 RNA polymerase-associated protein RapA strong 58 100
o Enterobacter asburiae PDN3 EX28DRAFT_3651 Superfamily II DNA/RNA helicases, SNF2 family cofit 57 100
o Enterobacter sp. TBS_079 MPMX20_00753 RNA polymerase-associated protein RapA strong 57 100
o Escherichia coli ECOR38 HEPCGN_08790 rapA RNA polymerase-associated protein RapA cofit 57 100
o Escherichia coli Nissle 1917 ECOLIN_RS00315 RNA polymerase-associated protein RapA strong 57 100
o Escherichia coli BL21 ECD_00061 RNA polymerase remodeling/recycling factor ATPase; RNA polymerase-associated, ATP-dependent RNA translocase strong 57 100
o Escherichia coli ECOR27 NOLOHH_03145 rapA RNA polymerase-associated protein RapA strong 57 100
o Escherichia coli ECRC100 OKFHMN_10800 rapA RNA polymerase-associated protein RapA strong 57 100
o Escherichia coli ECRC101 MCAODC_01315 rapA RNA polymerase-associated protein RapA strong 57 100
o Escherichia coli ECRC102 NIAGMN_08650 rapA RNA polymerase-associated protein RapA strong 57 100
o Escherichia coli ECRC62 BNILDI_08460 rapA RNA polymerase-associated protein RapA cofit 57 100
o Escherichia coli ECRC98 JDDGAC_14395 rapA RNA polymerase-associated protein RapA strong 57 100
o Escherichia coli ECRC99 KEDOAH_17355 rapA RNA polymerase-associated protein RapA no data 57 100
o Escherichia coli BW25113 b0059 hepA ATP-dependent helicase HepA (NCBI) strong 57 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03599 RNA polymerase-associated protein RapA strong 57 100
o Escherichia fergusonii Becca EFB2_03986 RNA polymerase-associated protein RapA insig. 57 100
o Serratia liquefaciens MT49 IAI46_03275 RNA polymerase-associated protein RapA insig. 56 100
o Dickeya dianthicola 67-19 HGI48_RS18170 RNA polymerase-associated protein RapA cofit 57 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF183 RNA polymerase associated protein RapA (EC 3.6.1.-) cofit 56 100
o Dickeya dadantii 3937 DDA3937_RS18235 RNA polymerase-associated protein RapA sig. 57 100
o Pectobacterium carotovorum WPP14 HER17_RS02990 RNA polymerase-associated protein RapA cofit 56 100
o Dickeya dianthicola ME23 DZA65_RS19310 RNA polymerase-associated protein RapA cofit 56 100
o Pantoea sp. MT58 IAI47_16055 RNA polymerase-associated protein RapA sig. 55 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS16365 rapA RNA polymerase-associated protein RapA cofit 55 100
o Erwinia amylovora T8 OLJFJH_01340 RNA polymerase-associated protein RapA strong 55 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_06075 RNA polymerase-associated protein RapA insig. 55 100
o Erwinia tracheiphila SCR3 LU632_RS02805 rapA RNA polymerase-associated protein RapA sig. 55 100
o Rahnella sp. WP5 EX31_RS03745 RNA polymerase-associated protein RapA cofit 55 100
o Pseudomonas aeruginosa MRSN321 DY961_RS00330 rapA;go_function=ATP RNA polymerase-associated protein RapA sig. 51 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS40690 rapA;go_function=ATP RNA polymerase-associated protein RapA sig. 51 100
o Pseudomonas aeruginosa PA14 IKLFDK_16965 RNA polymerase-associated protein RapA sig. 51 100
o Pseudomonas sp. DMC3 GFF2193 RNA polymerase-associated protein RapA cofit 50 100
o Pseudomonas syringae pv. syringae B728a Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit sig. 49 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3842 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit sig. 49 100
o Pseudomonas fluorescens FW300-N2C3 AO356_04975 RNA polymerase-associated protein RapA sig. 49 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2845 RNA polymerase associated protein RapA (EC 3.6.1.-) strong 49 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01492 RNA polymerase-associated protein RapA insig. 50 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3224 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 50 100
o Pseudomonas segetis P6 ACVTMO_RS16290 rapA RNA polymerase-associated protein RapA sig. 49 100
o Pseudomonas orientalis W4I3 QF045_RS09435 RNA polymerase-associated protein RapA insig. 49 100
o Pseudomonas stutzeri RCH2 Psest_1327 Superfamily II DNA/RNA helicases, SNF2 family sig. 49 99
o Pseudomonas sp. SVBP6 COO64_RS17145 rapA RNA polymerase-associated protein RapA cofit 49 100
o Pseudomonas sp. S08-1 OH686_19955 RNA polymerase associated protein RapA insig. 49 100
o Pseudomonas sp. BP01 JOY50_RS24235 rapA RNA polymerase-associated protein RapA cofit 49 100
o Pseudomonas sp. RS175 PFR28_00612 RNA polymerase-associated protein RapA insig. 49 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4599 RNA polymerase associated protein RapA (EC 3.6.1.-) sig. 49 100
o Pseudomonas protegens RBAN4 FABNJH_06835 rapA RNA polymerase-associated protein RapA insig. 49 100
o Pseudomonas fluorescens SBW25 PFLU_RS06675 RNA polymerase-associated protein RapA cofit 49 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06675 RNA polymerase-associated protein RapA sig. 49 100
o Pseudomonas putida KT2440 PP_1145 RNA polymerase-associated protein RapA sig. 49 100
o Pseudomonas fluorescens FW300-N2E3 AO353_17155 RNA polymerase-associated protein RapA sig. 49 100
o Pseudomonas simiae WCS417 PS417_06645 RNA polymerase-associated protein RapA strong 49 100
o Alteromonas macleodii MIT1002 MIT1002_00659 RNA polymerase-associated protein RapA cofit 46 99
o Marinobacter adhaerens HP15 HP15_3376 RNA polymerase-associated protein RapA strong 44 100
o Acinetobacter baumannii LAC-4 RR41_RS05200 RNA polymerase-associated protein RapA insig. 44 99
o Acinetobacter radioresistens SK82 MPMX26_01027 RNA polymerase-associated protein RapA strong 44 99
o Rhodanobacter sp. FW510-T8 OKGIIK_09865 rapA RNA polymerase-associated protein RapA insig. 41 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS07105 RNA polymerase-associated protein RapA insig. 41 99
o Rhodanobacter denitrificans MT42 LRK55_RS02635 RNA polymerase-associated protein RapA strong 41 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS02885 RNA polymerase-associated protein RapA strong 41 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS09245 RNA polymerase-associated protein RapA sig. 40 99
  Pseudomonas segetis P6 ACVTMO_RS09795 DEAD/DEAH box helicase insig. 25 46
  Escherichia coli ECRC100 OKFHMN_11670 hepA helicase cofit 24 47
  Escherichia coli ECRC101 MCAODC_02185 hepA helicase strong 24 47
  Escherichia coli ECRC102 NIAGMN_09520 hepA helicase cofit 24 47
  Escherichia coli ECRC98 JDDGAC_15270 hepA helicase cofit 24 47
  Escherichia coli ECRC62 BNILDI_09545 hepA helicase cofit 24 47
  Escherichia coli ECRC99 KEDOAH_16475 hepA helicase no data 24 47
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 38 19
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 34 19
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 38 21
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 35 20
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 33 20
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 38 20
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01985 DISARM system SNF2-like helicase DrmD insig. 35 17
  Enterobacter sp. TBS_079 MPMX20_00569 RNA polymerase-associated protein RapA insig. 34 17
  Castellaniella sp019104865 MT123 ABCV34_RS02050 helicase-related protein cofit 26 45
  Pseudomonas aeruginosa PUPa3 DQ20_RS34555 SNF2-related protein strong 29 26
  Pseudomonas segetis P6 ACVTMO_RS09785 SNF2-related protein insig. 29 26
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6015 RNA polymerase associated protein RapA (EC 3.6.1.-) insig. 36 21
  Paraburkholderia graminis OAS925 ABIE53_003106 superfamily II DNA or RNA helicase insig. 34 17
  Paraburkholderia sabiae LMG 24235 QEN71_RS00695 DEAD/DEAH box helicase cofit 31 19
  Pseudomonas aeruginosa PUPa3 DQ20_RS34555 SNF2-related protein strong 37 14
  Pseudomonas segetis P6 ACVTMO_RS09785 SNF2-related protein insig. 37 14
  Bosea sp. OAE506 ABIE41_RS19075 DISARM system SNF2-like helicase DrmD insig. 32 17
  Pseudomonas sp. S08-1 OH686_23015 hypothetical protein insig. 28 19
  Bacteroides ovatus ATCC 8483 BACOVA_01961 SNF2 family N-terminal domain protein insig. 23 49
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.688.1 helicase (Snf2/Rad54 family) no data 57 5
  Rhodopseudomonas palustris CGA009 TX73_011450 helicase-related protein insig. 36 11
  Kangiella aquimarina DSM 16071 B158DRAFT_1267 Superfamily II DNA/RNA helicases, SNF2 family insig. 49 5
  Vibrio cholerae E7946 ATCC 55056 CSW01_19065 ATP-dependent helicase insig. 33 12
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00855 RNA helicase sig. 29 14
  Synechocystis sp000284455 PCC 6803 SGL_RS01585 phospholipase D-like domain-containing protein insig. 32 14
  Azospirillum brasilense Sp245 AZOBR_RS30290 RNA helicase insig. 36 10
  Enterobacter sp. TBS_079 MPMX20_00569 RNA polymerase-associated protein RapA insig. 29 12
  Pseudomonas aeruginosa PUPa3 DQ20_RS34580 phospholipase D-like domain-containing anti-phage protein strong 31 12
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17010 helicase SNF2 strong 22 49
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 34 12
  Bacteroides thetaiotaomicron VPI-5482 BT4628 ATP-dependent helicase (NCBI ptt file) insig. 29 17
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 33 12
  Sinorhizobium meliloti 1021 SMc02152 helicase insig. 33 10
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22985 helicase SNF2 strong 23 46
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14095 hypothetical protein insig. 27 19
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 33 12
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0444 Superfamily II DNA/RNA helicases, SNF2 family insig. 20 47
  Pseudomonas aeruginosa MRSN321 DY961_RS03505 helicase-related protein strong 29 15
  Desulfovibrio vulgaris Hildenborough JW710 DVU3310 deaD ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) strong 25 13
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14945 helicase insig. 28 14
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 32 12
  Erwinia amylovora T8 OLJFJH_07310 helicase insig. 31 15
  Azospirillum sp. SherDot2 MPMX19_00976 ATP-dependent RNA helicase RhlE insig. 30 11
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14095 hypothetical protein insig. 49 6
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 33 11
  Marinobacter adhaerens HP15 HP15_2099 DEAD/DEAH box helicase domain protein sig. 27 12
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 27 15
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 32 12
  Paraburkholderia graminis OAS925 ABIE53_003106 superfamily II DNA or RNA helicase insig. 23 26
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 31 11
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 31 11
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6015 RNA polymerase associated protein RapA (EC 3.6.1.-) insig. 39 5
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 31 11
  Fusobacterium nucleatum SB010 HUW76_08675 DEAD/DEAH box helicase family protein strong 21 19
  Shewanella sp. ANA-3 Shewana3_1422 4a-hydroxytetrahydrobiopterin dehydratase (RefSeq) no data 31 12
  Rhodopseudomonas palustris CGA009 TX73_019020 DEAD/DEAH box helicase insig. 31 11
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 26 14
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 31 11
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01200 DEAD/DEAH box helicase insig. 27 13
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 34 10
  Paraburkholderia sabiae LMG 24235 QEN71_RS00695 DEAD/DEAH box helicase cofit 33 12
  Magnetospirillum magneticum AMB-1 AMB_RS04645 ATP-dependent helicase cofit 32 13
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17645 SNF2-related protein insig. 29 17
  Rhodospirillum rubrum S1H Rru_A1915 DEAD/DEAH box helicase (NCBI) cofit 28 12
  Acidovorax sp. GW101-3H11 Ac3H11_2184 FIG00348557: hypothetical protein insig. 27 22
  Acinetobacter radioresistens SK82 MPMX26_02863 RNA polymerase-associated protein RapA insig. 27 13
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 27 12
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3463.1 COG0553: Superfamily II DNA/RNA helicases, SNF2 family insig. 25 14
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13975 DEAD/DEAH family ATP-dependent RNA helicase no data 24 19
  Pantoea sp. MT58 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase strong 24 20
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 34 9
  Azospirillum sp. SherDot2 MPMX19_02097 ATP-dependent RNA helicase RhlE insig. 29 11
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 27 12
  Cupriavidus basilensis FW507-4G11 RR42_RS08740 helicase insig. 23 46
  Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 33 10
  Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 29 13
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 26 12
  Dinoroseobacter shibae DFL-12 Dshi_2715 DEAD/DEAH box helicase domain protein (RefSeq) insig. 25 18
  Erwinia tracheiphila SCR3 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase no data 24 19
  Shewanella oneidensis MR-1 SO3125 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 30 12
  Rhodanobacter denitrificans MT42 LRK55_RS17115 DEAD/DEAH box helicase insig. 28 17
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07560 DNA helicase RecQ sig. 28 14
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 26 12
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS05195 ATP-dependent RNA helicase DbpA insig. 25 13
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS17210 DEAD/DEAH family ATP-dependent RNA helicase cofit 23 20
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS01985 DISARM system SNF2-like helicase DrmD insig. 33 9
  Klebsiella pneumoniae MKP103 KDGMDA_17180 ATP-dependent RNA helicase RhlE sig. 31 10
  Klebsiella pneumoniae MRSN742743 KFA93_RS01465 rhlE;go_function=RNA ATP-dependent RNA helicase RhlE cofit 31 10
  Acidovorax sp. GW101-3H11 Ac3H11_386 ATP-dependent RNA helicase RhlE insig. 30 11
  Shewanella amazonensis SB2B Sama_0383 ATP-dependent RNA helicase RhlE (RefSeq) insig. 28 12
  Bosea sp. OAE506 ABIE41_RS19075 DISARM system SNF2-like helicase DrmD insig. 28 15
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14040 helicase insig. 25 47
  Erwinia tracheiphila SCR3 LU632_RS20970 DEAD/DEAH box helicase cofit 25 47
  Pseudomonas aeruginosa PUPa3 DQ20_RS34580 phospholipase D-like domain-containing anti-phage protein strong 36 7
  Synechocystis sp000284455 PCC 6803 SGL_RS15320 DEAD/DEAH box helicase strong 25 18
  Shewanella amazonensis SB2B Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) strong 25 12
  Shewanella oneidensis MR-1 SO3783 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 32 11
  Phocaeicola dorei CL03T12C01 ABI39_RS10235 DNA helicase RecQ insig. 28 12
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14585 DNA helicase RecQ strong 28 12
  Caulobacter crescentus NA1000 CCNA_01546 DEAD-box RNA helicase-like protein strong 24 17
  Caulobacter crescentus NA1000 Δfur CCNA_01546 DEAD-box RNA helicase-like protein cofit 24 17
  Pseudomonas segetis P6 ACVTMO_RS17575 rhlB ATP-dependent RNA helicase RhlB insig. 30 10
  Rhodanobacter sp. FW510-T8 OKGIIK_16155 Helicase SNF2 insig. 29 16
  Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 27 11
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06540 Superfamily II DNA or RNA helicase, SNF2 family insig. 28 15
  Herbaspirillum seropedicae SmR1 HSERO_RS22930 helicase insig. 24 47
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 32 11
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3530 ATP-dependent RNA helicase RhlE cofit 29 12
  Burkholderia phytofirmans PsJN BPHYT_RS24775 helicase insig. 28 15
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1786 ATP-dependent DNA helicase, RecQ family insig. 27 15
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 26 11
  Magnetospirillum magneticum AMB-1 AMB_RS07215 ATP-dependent helicase insig. 29 12
  Shewanella sp. ANA-3 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) strong 23 12