Homologs of Dshi_3110 from Dinoroseobacter shibae DFL-12

cyclic nucleotide-binding protein (RefSeq)
SEED: transcriptional regulator, Crp/Fnr family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_3110 cyclic nucleotide-binding protein (RefSeq) insig. 100 100
o Variovorax sp. SCN45 GFF6806 transcriptional regulator, Crp/Fnr family no data 29 89
o Pseudomonas fluorescens SBW25 PFLU_RS00970 Crp/Fnr family transcriptional regulator insig. 29 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS00970 Crp/Fnr family transcriptional regulator insig. 29 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_481 transcriptional regulator, Crp/Fnr family insig. 27 94
o Burkholderia phytofirmans PsJN BPHYT_RS34870 Crp/Fnr family transcriptional regulator no data 28 93
o Cupriavidus basilensis FW507-4G11 RR42_RS29000 Crp/Fnr family transcriptional regulator insig. 29 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03624 cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases no data 27 96
o Pseudomonas sp. S08-1 OH686_11910 Transcriptional regulator, Crp/Fnr family insig. 28 96
o Paraburkholderia graminis OAS925 ABIE53_004632 CRP/FNR family cyclic AMP-dependent transcriptional regulator insig. 27 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1722 transcriptional regulator, Crp/Fnr family insig. 26 93
o Enterobacter sp. TBS_079 MPMX20_00402 hypothetical protein insig. 24 96
  Enterobacter sp. TBS_079 MPMX20_00403 hypothetical protein sig. 24 95
o Pseudomonas simiae WCS417 PS417_00955 Crp/Fnr family transcriptional regulator insig. 28 93
o Sinorhizobium meliloti 1021 SMa1067 transcriptional regulator insig. 27 96
o Pseudomonas fluorescens FW300-N2E3 AO353_11565 Crp/Fnr family transcriptional regulator insig. 25 93
  Cupriavidus basilensis FW507-4G11 RR42_RS28775 hypothetical protein insig. 29 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS16350 Crp/Fnr family transcriptional regulator insig. 27 97
  Cupriavidus basilensis FW507-4G11 RR42_RS25385 cyclic nucleotide-binding protein insig. 25 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3997 transcriptional regulator, Crp/Fnr family insig. 26 93
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19890 Crp/Fnr family transcriptional regulator insig. 26 95
o Ralstonia solanacearum UW163 UW163_RS19285 Crp/Fnr family transcriptional regulator insig. 26 95
  Herbaspirillum seropedicae SmR1 HSERO_RS12690 transcriptional regulator strong 26 85
o Pseudomonas fluorescens FW300-N2C3 AO356_10645 Crp/Fnr family transcriptional regulator insig. 26 93
  Burkholderia phytofirmans PsJN BPHYT_RS05355 Crp/Fnr family transcriptional regulator insig. 28 81
  Cupriavidus basilensis FW507-4G11 RR42_RS04050 Crp/Fnr family transcriptional regulator insig. 27 84
  Enterobacter sp. TBS_079 MPMX20_00404 hypothetical protein cofit 24 95
o Ralstonia solanacearum PSI07 RPSI07_RS03320 Crp/Fnr family transcriptional regulator insig. 24 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS18050 Crp/Fnr family transcriptional regulator no data 26 96
  Ralstonia solanacearum UW163 UW163_RS13110 fumarate/nitrate reduction transcriptional regulator Fnr insig. 28 85
  Ralstonia solanacearum PSI07 RPSI07_RS17705 fumarate/nitrate reduction transcriptional regulator Fnr insig. 28 84
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15650 fumarate/nitrate reduction transcriptional regulator Fnr insig. 28 85
  Herbaspirillum seropedicae SmR1 HSERO_RS16020 transcriptional regulator no data 25 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS11180 fumarate/nitrate reduction transcriptional regulator Fnr strong 27 85
  Variovorax sp. SCN45 GFF363 Transcriptional regulator, Crp/Fnr family insig. 24 93
  Ralstonia solanacearum GMI1000 RS_RS06430 fumarate/nitrate reduction transcriptional regulator Fnr insig. 27 85
  Dechlorosoma suillum PS Dsui_1460 cAMP-binding protein strong 25 89
  Pseudomonas stutzeri RCH2 Psest_3646 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases insig. 26 80
o Acidovorax sp. GW101-3H11 Ac3H11_496 transcriptional regulator, Crp/Fnr family insig. 26 95
  Pseudomonas sp. S08-1 OH686_15145 Cyclic AMP receptor protein cofit 27 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4177 transcriptional regulator, Crp/Fnr family insig. 27 84
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2063 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases insig. 26 96
o Variovorax sp. OAS795 ABID97_RS17015 Crp/Fnr family transcriptional regulator insig. 24 93
  Ralstonia solanacearum GMI1000 RS_RS20965 Crp/Fnr family transcriptional regulator insig. 25 95
  Castellaniella sp019104865 MT123 ABCV34_RS06835 helix-turn-helix domain-containing protein strong 24 85
o Dickeya dadantii 3937 DDA3937_RS19445 cAMP-activated global transcriptional regulator CRP no data 26 81
o Dickeya dianthicola 67-19 HGI48_RS19565 cAMP-activated global transcriptional regulator CRP no data 26 81
o Dickeya dianthicola ME23 DZA65_RS20650 cAMP-activated global transcriptional regulator CRP no data 26 81
o Alteromonas macleodii MIT1002 MIT1002_02534 cAMP regulatory protein insig. 24 91
o Pseudomonas sp. RS175 PFR28_04770 CRP-like cAMP-activated global transcriptional regulator insig. 28 93
o Escherichia coli BL21 ECD_03208 cAMP-activated global transcription factor, mediator of catabolite repression no data 26 81
o Escherichia fergusonii Becca EFB2_00465 cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli ECOR27 NOLOHH_09040 crp cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli ECOR38 HEPCGN_16065 crp cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli ECRC101 OKFHMN_17240 crp cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli ECRC101 MCAODC_07770 crp cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli ECRC102 NIAGMN_15010 crp cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli ECRC62 BNILDI_02480 crp cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli ECRC98 JDDGAC_20870 crp cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli ECRC99 KEDOAH_10900 crp cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00345 cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli Nissle 1917 ECOLIN_RS19230 cAMP-activated global transcriptional regulator CRP no data 26 81
o Escherichia coli BW25113 b3357 crp DNA-binding transcriptional dual regulator (NCBI) no data 26 81
o Marinobacter adhaerens HP15 HP15_3153 protein containing cyclic nucleotide-binding domain insig. 23 94
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05625 response regulator insig. 24 85
o Kangiella aquimarina DSM 16071 B158DRAFT_0264 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases strong 28 83
o Pectobacterium carotovorum WPP14 HER17_RS01915 cAMP-activated global transcriptional regulator CRP no data 26 81
o Rahnella sp. WP5 EX31_RS04620 cAMP-activated global transcriptional regulator CRP no data 26 81
  Ralstonia sp. UNC404CL21Col ABZR87_RS20530 Crp/Fnr family transcriptional regulator insig. 24 97
o Enterobacter asburiae PDN3 EX28DRAFT_4172 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases no data 26 81
  Enterobacter sp. TBS_079 MPMX20_04260 cAMP-activated global transcriptional regulator CRP no data 26 81
o Klebsiella michiganensis M5al BWI76_RS25990 cAMP-activated global transcriptional regulator CRP no data 26 81
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3712 Cyclic AMP receptor protein strong 26 81
  Desulfovibrio vulgaris Miyazaki F DvMF_0993 transcriptional regulator, Crp/Fnr family (RefSeq) insig. 24 84
  Dechlorosoma suillum PS Dsui_1690 cAMP-binding protein cofit 26 80
o Serratia liquefaciens MT49 IAI46_23580 cAMP-activated global transcriptional regulator CRP no data 26 81
  Magnetospirillum magneticum AMB-1 AMB_RS09390 Crp/Fnr family transcriptional regulator insig. 28 93
  Variovorax sp. SCN45 GFF3384 Transcriptional regulator, Crp/Fnr family insig. 27 98
o Pantoea sp. MT58 IAI47_01965 cAMP-activated global transcriptional regulator CRP no data 25 81
  Herbaspirillum seropedicae SmR1 HSERO_RS23530 Crp/Fnr family transcriptional regulator insig. 25 98
  Cupriavidus basilensis FW507-4G11 RR42_RS12875 transcriptional regulator insig. 26 84
  Cupriavidus basilensis FW507-4G11 RR42_RS08885 Crp/Fnr family transcriptional regulator insig. 28 87
o Vibrio cholerae E7946 ATCC 55056 CSW01_13230 cAMP-activated global transcriptional regulator CRP no data 25 81
o Shewanella sp. ANA-3 Shewana3_0617 cAMP-regulatory protein (RefSeq) no data 26 83
o Shewanella oneidensis MR-1 SO0624 crp catabolite gene activator (NCBI ptt file) strong 26 83
o Azospirillum sp. SherDot2 MPMX19_03723 hypothetical protein no data 23 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4495 transcriptional regulator, Crp/Fnr family insig. 23 99
  Pseudomonas fluorescens FW300-N2E3 AO353_19870 Crp/Fnr family transcriptional regulator insig. 25 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1224 Vfr transcriptional regulator / Cyclic AMP receptor protein insig. 25 81
  Ralstonia solanacearum PSI07 RPSI07_RS06730 Crp/Fnr family transcriptional regulator insig. 25 99
  Pseudomonas fluorescens SBW25 PFLU_RS11080 Crp/Fnr family transcriptional regulator insig. 24 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11080 Crp/Fnr family transcriptional regulator insig. 24 87
  Acidovorax sp. GW101-3H11 Ac3H11_1053 transcriptional regulator, Crp/Fnr family no data 23 94
  Pseudomonas stutzeri RCH2 Psest_3495 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases insig. 23 98
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS09000 response regulator insig. 22 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3841 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases insig. 26 98
o Shewanella amazonensis SB2B Sama_3004 cAMP-regulatory protein (RefSeq) strong 25 83
  Pseudomonas simiae WCS417 PS417_15825 Crp/Fnr family transcriptional regulator insig. 25 85
  Burkholderia phytofirmans PsJN BPHYT_RS21215 Crp/Fnr family transcriptional regulator strong 23 85
o Erwinia tracheiphila SCR3 LU632_RS22800 crp cAMP-activated global transcriptional regulator CRP no data 24 81