Homologs of Rru_A0763 from Rhodospirillum rubrum S1H

Radical SAM (NCBI)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Rhodospirillum rubrum S1H Rru_A0763 Radical SAM (NCBI) insig. 100 100
  Desulfovibrio vulgaris Miyazaki F DvMF_2903 Radical SAM domain protein (RefSeq) no data 32 55
  Desulfovibrio vulgaris Hildenborough JW710 DVU0857 nirJ-1 radical SAM domain protein (TIGR) no data 31 55
  Mycobacterium tuberculosis H37Rv Rv0693 Probable coenzyme PQQ synthesis protein E PqqE (coenzyme PQQ synthesis protein III) insig. 34 52
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03458 PqqA peptide cyclase cofit 32 60
  Alteromonas macleodii MIT1002 MIT1002_03289 Antilisterial bacteriocin subtilosin biosynthesis protein AlbA strong 30 55
  Desulfovibrio vulgaris Miyazaki F DvMF_2901 Radical SAM domain protein (RefSeq) no data 29 52
  Magnetospirillum magneticum AMB-1 AMB_RS07120 heme d1 biosynthesis radical SAM protein NirJ cofit 31 55
  Pseudomonas sp. SVBP6 COO64_RS14070 nirJ heme d1 biosynthesis radical SAM protein NirJ insig. 30 60
  Desulfovibrio vulgaris Hildenborough JW710 DVU0855 radical SAM domain protein (TIGR) no data 28 52
  Pseudomonas sp. RS175 PFR28_02238 Putative mycofactocin radical SAM maturase MftC insig. 30 60
  Pseudomonas fluorescens FW300-N2E3 AO353_21930 heme d1 biosynthesis radical SAM protein NirJ insig. 31 58
  Ralstonia solanacearum PSI07 RPSI07_RS16210 GDL motif peptide-associated radical SAM/SPASM maturase insig. 31 58
  Pseudomonas stutzeri RCH2 Psest_0811 heme d1 biosynthesis radical SAM protein NirJ strong 32 51
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5772 Heme d1 biosynthesis protein NirJ strong 31 58
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01265 GDL motif peptide-associated radical SAM/SPASM maturase insig. 31 58
  Ralstonia solanacearum UW163 UW163_RS14575 GDL motif peptide-associated radical SAM/SPASM maturase insig. 31 58
  Dechlorosoma suillum PS Dsui_3126 heme d1 biosynthesis radical SAM protein NirJ strong 30 52
  Dickeya dianthicola 67-19 HGI48_RS17455 radical SAM protein insig. 28 49
  Dickeya dadantii 3937 DDA3937_RS08375 radical SAM protein insig. 24 55
  Ralstonia solanacearum GMI1000 RS_RS08730 GDL motif peptide-associated radical SAM/SPASM maturase insig. 31 58
  Pseudomonas aeruginosa MRSN321 DY961_RS22565 nirJ;go_function=4 heme d1 biosynthesis radical SAM protein NirJ insig. 29 56
  Pseudomonas aeruginosa PA14 IKLFDK_22880 heme d1 biosynthesis radical SAM protein NirJ insig. 29 56
  Pseudomonas aeruginosa PUPa3 DQ20_RS36770 nirJ;go_function=4 heme d1 biosynthesis radical SAM protein NirJ insig. 29 56
o Rhodopseudomonas palustris CGA009 TX73_020720 radical SAM protein insig. 27 92
  Pseudomonas fluorescens FW300-N2E3 AO353_27515 radical SAM protein insig. 30 52
  Magnetospirillum magneticum AMB-1 AMB_RS15065 radical SAM protein cofit 28 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4237 COG1180: Radical SAM, Pyruvate-formate lyase-activating enzyme like insig. 30 52
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_697 Heme d1 biosynthesis protein NirJ insig. 30 60
  Pseudomonas fluorescens FW300-N2C3 AO356_25035 heme d1 biosynthesis radical SAM protein NirJ insig. 30 53
  Paraburkholderia graminis OAS925 ABIE53_005479 pyrroloquinoline quinone biosynthesis protein E sig. 26 62
  Xanthobacter sp. DMC5 GFF1197 PqqA peptide cyclase insig. 32 51
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01333 pyrroloquinoline quinone biosynthesis protein E insig. 26 62
  Ralstonia solanacearum GMI1000 RS_RS20590 radical SAM protein insig. 28 53
o Rahnella sp. WP5 EX31_RS00655 pyrroloquinoline quinone biosynthesis protein PqqE insig. 24 96
  Dinoroseobacter shibae DFL-12 Dshi_3173 Radical SAM domain protein (RefSeq) insig. 30 59
  Desulfovibrio vulgaris Hildenborough JW710 DVU1554 radical SAM domain protein (TIGR) insig. 30 58
  Erwinia amylovora T8 OLJFJH_02120 pyrroloquinoline quinone biosynthesis protein PqqE insig. 28 50
  Dinoroseobacter shibae DFL-12 Dshi_0454 coenzyme PQQ biosynthesis protein E (RefSeq) insig. 31 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS32675 pyrroloquinoline quinone biosynthesis protein PqqE insig. 27 50
  Desulfovibrio vulgaris Miyazaki F DvMF_1873 Radical SAM domain protein (RefSeq) insig. 33 52
  Acinetobacter baumannii LAC-4 RR41_RS13060 pyrroloquinoline quinone biosynthesis protein PqqE insig. 26 55
o Escherichia coli Nissle 1917 ECOLIN_RS08590 anaerobic sulfatase maturase no data 24 93
o Azospirillum sp. SherDot2 MPMX19_05110 PqqA peptide cyclase insig. 25 92
  Pseudomonas aeruginosa MRSN321 DY961_RS16130 pqqE;go_process=peptide pyrroloquinoline quinone biosynthesis protein PqqE sig. 24 96
  Pseudomonas aeruginosa PA14 IKLFDK_09720 pyrroloquinoline quinone biosynthesis protein PqqE insig. 24 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS38450 pqqE;go_process=peptide pyrroloquinoline quinone biosynthesis protein PqqE sig. 24 96
o Escherichia fergusonii Becca EFB2_02503 Anaerobic sulfatase-maturating enzyme insig. 22 93
  Marinobacter adhaerens HP15 HP15_3137 pyrroloquinoline quinone biosynthesis protein PqqE strong 26 65
  Pseudomonas stutzeri RCH2 Psest_2270 coenzyme PQQ biosynthesis protein E strong 24 84
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1485.1 Coenzyme PQQ synthesis protein E insig. 31 51
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05309 PqqA peptide cyclase cofit 25 87
  Pseudomonas fluorescens FW300-N2E3 AO353_22410 pyrroloquinoline quinone biosynthesis protein PqqE insig. 24 81
o Escherichia coli ECRC100 OKFHMN_01265 ydeM anaerobic sulfatase maturase cofit 24 93
o Escherichia coli ECRC101 MCAODC_16675 ydeM anaerobic sulfatase maturase insig. 24 93
o Escherichia coli ECRC102 NIAGMN_25395 ydeM anaerobic sulfatase maturase insig. 24 93
o Escherichia coli ECRC98 JDDGAC_03755 ydeM anaerobic sulfatase maturase no data 24 93
o Escherichia coli ECRC99 KEDOAH_27175 ydeM anaerobic sulfatase maturase no data 24 93
o Escherichia coli ECOR38 HEPCGN_26535 ydeM anaerobic sulfatase maturase insig. 24 93
o Escherichia coli BL21 ECD_01455 putative YdeN-specific sulfatase-maturating enzyme no data 24 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02220 Anaerobic sulfatase-maturating enzyme no data 24 93
o Escherichia coli BW25113 b1497 b1497 putative enzyme (VIMSS) strong 24 93
  Dechlorosoma suillum PS Dsui_0721 radical SAM additional 4Fe4S-binding domain protein cofit 31 45
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5407 Coenzyme PQQ synthesis protein E cofit 27 66
  Bacteroides thetaiotaomicron VPI-5482 BT0510 putative heme biosynthesis protein (NCBI ptt file) insig. 30 59
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02740 radical SAM protein insig. 26 39
  Pseudomonas segetis P6 ACVTMO_RS02495 arsS arsenosugar biosynthesis radical SAM (seleno)protein ArsS insig. 30 42
o Pseudomonas sp. DMC3 GFF62 PqqA peptide cyclase cofit 24 87
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10070 arsenosugar biosynthesis radical SAM protein ArsS insig. 27 64
  Pseudomonas simiae WCS417 PS417_25940 pyrroloquinoline quinone biosynthesis protein PqqE strong 24 87
  Pseudomonas fluorescens FW300-N2C3 AO356_30425 pyrroloquinoline quinone biosynthesis protein PqqE insig. 25 87
  Pantoea sp. MT58 IAI47_10205 pyrroloquinoline quinone biosynthesis protein PqqE insig. 26 49
  Sinorhizobium meliloti 1021 SM_b20208 pyrroloquinoline quinone biosynthesis protein PqqE insig. 32 36
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05940 pyrroloquinoline quinone biosynthesis protein PqqE cofit 26 50
  Pseudomonas orientalis W4I3 QF045_RS00340 pyrroloquinoline quinone biosynthesis protein PqqE insig. 24 87
  Pseudomonas syringae pv. syringae B728a Psyr_4674 Radical SAM insig. 23 87
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4674 Radical SAM insig. 23 87
  Pseudomonas stutzeri RCH2 Psest_2279 coenzyme PQQ biosynthesis protein E insig. 26 47
  Azospirillum sp. SherDot2 MPMX19_03350 GTP 3',8-cyclase insig. 33 48
  Klebsiella pneumoniae MKP103 KDGMDA_22545 pyrroloquinoline quinone biosynthesis protein PqqE insig. 27 47
  Pseudomonas fluorescens FW300-N2E3 AO353_07450 pyrroloquinoline quinone biosynthesis protein PqqE insig. 24 87
o Escherichia coli ECOR27 NOLOHH_18905 ydeM anaerobic sulfatase maturase no data 23 93
o Escherichia coli ECRC62 BNILDI_17395 ydeM anaerobic sulfatase maturase cofit 23 93
  Mycobacterium tuberculosis H37Rv Rv3729 Possible transferase insig. 29 38
  Pseudomonas fluorescens FW300-N2C3 AO356_14200 pyrroloquinoline quinone biosynthesis protein PqqE sig. 25 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2499 Coenzyme PQQ synthesis protein E cofit 24 87
  Desulfovibrio vulgaris Miyazaki F DvMF_2722 Radical SAM domain protein (RefSeq) insig. 24 94
  Phocaeicola dorei CL03T12C01 ABI39_RS13740 radical SAM protein insig. 23 52
  Methylophilus sp. DMC18 GFF671 PqqA peptide cyclase insig. 25 55
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1947 Coenzyme PQQ synthesis protein E insig. 25 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4772 Coenzyme PQQ synthesis protein E strong 25 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1165 Coenzyme PQQ synthesis protein E insig. 24 84
  Pseudomonas sp. RS175 PFR28_04090 PqqA peptide cyclase cofit 25 84
  Pseudomonas fluorescens SBW25 PFLU_RS27585 pyrroloquinoline quinone biosynthesis protein PqqE insig. 24 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27585 pyrroloquinoline quinone biosynthesis protein PqqE insig. 24 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4505 Coenzyme PQQ synthesis protein E insig. 24 78
  Azospirillum brasilense Sp245 AZOBR_RS07530 pyrroloquinoline quinone biosynthesis protein PqqE strong 25 93
  Azospirillum sp. SherDot2 MPMX19_06583 GTP 3',8-cyclase cofit 33 43
  Desulfovibrio vulgaris Hildenborough JW710 DVU3018 radical SAM domain protein (TIGR) insig. 28 46
  Rhodopseudomonas palustris CGA009 TX73_010055 pyrroloquinoline quinone biosynthesis protein PqqE insig. 30 51