| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.3669.1 | | 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) | 1.0 | Xcc-8004.4336.1 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.28 | 18 |
| Lysobacter sp. OAE881 | 0.70 | ABIE51_RS13830 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.72 | ABIE51_RS16490 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.60 | OKGIIK_07840 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.65 | OKGIIK_11830 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 53 |
| Rhodanobacter denitrificans MT42 | 0.60 | LRK55_RS16715 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.66 | LRK55_RS11765 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 63 |
| Dyella japonica UNC79MFTsu3.2 | 0.60 | ABZR86_RS07120 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.67 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 74 |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS17000 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.66 | LRK54_RS12030 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 59 |
| Rhodanobacter sp000427505 FW510-R12 | 0.59 | LRK53_RS11940 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.67 | LRK53_RS16505 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 59 |
| Marinobacter adhaerens HP15 | 0.45 | HP15_790 | | 23S rRNA 5-methyluridine methyltransferase | 0.59 | HP15_2917 | | 5,10-methylenetetrahydrofolate reductase-like protein | low | > 73 |
| Castellaniella sp019104865 MT123 | 0.45 | ABCV34_RS03050 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.50 | ABCV34_RS13550 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 48 |
| Kangiella aquimarina DSM 16071 | 0.44 | B158DRAFT_2275 | | 23S rRNA (uracil-5-)-methyltransferase RumA | 0.37 | B158DRAFT_2461 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) | low | > 40 |
| Paraburkholderia sabiae LMG 24235 | 0.42 | QEN71_RS22225 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.57 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 153 |
| Ralstonia sp. UNC404CL21Col | 0.41 | ABZR87_RS10885 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.57 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.41 | RR42_RS13170 | | 23S rRNA methyltransferase | 0.57 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | low | > 128 |
| Acinetobacter radioresistens SK82 | 0.41 | MPMX26_00538 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.50 | MPMX26_01002 | | 5,10-methylenetetrahydrofolate reductase | low | > 36 |
| Methylophilus sp. DMC18 | 0.41 | GFF916 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.55 | GFF1492 | | 5,10-methylenetetrahydrofolate reductase | — | — |
| Burkholderia phytofirmans PsJN | 0.41 | BPHYT_RS09125 | | 23S rRNA methyltransferase | 0.56 | BPHYT_RS18705 | | 5,10-methylenetetrahydrofolate reductase | low | > 109 |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS14825 | | 23S rRNA methyltransferase | 0.55 | HSERO_RS21425 | | 5,10-methylenetetrahydrofolate reductase | low | > 78 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_00846 | | 23S rRNA m(5)U-1939 methyltransferase | 0.57 | H281DRAFT_05801 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.40 | RPSI07_RS18130 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.58 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS15245 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.58 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 76 |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS12710 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.58 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS06055 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.57 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.40 | Ac3H11_2847 | | 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) | 0.52 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 79 |
| Acinetobacter baumannii LAC-4 | 0.39 | RR41_RS16085 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.51 | RR41_RS05725 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 55 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF3883 | | 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) | 0.56 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
| Dechlorosoma suillum PS | 0.38 | Dsui_1981 | | 23S rRNA (uracil-5-)-methyltransferase RumA | 0.55 | Dsui_0640 | | 5,10-methylenetetrahydrofolate reductase | — | — |
| Variovorax sp. SCN45 | 0.37 | GFF2841 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) | 0.49 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.73 | 27 |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_1639 | | 23S rRNA (uracil-5-)-methyltransferase RumA | 0.55 | Psest_0313 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 67 |
| Pseudomonas sp. DMC3 | 0.36 | GFF4819 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.54 | GFF171 | | 5,10-methylenetetrahydrofolate reductase | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.35 | HER17_RS04110 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.37 | HER17_RS00950 | | methylenetetrahydrofolate reductase | low | > 75 |
| Pseudomonas lactucae CFBP13502 | 0.35 | GEMAOFIL_04224 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.55 | GEMAOFIL_05433 | | 5,10-methylenetetrahydrofolate reductase | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.35 | PFLU_RS22100 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.56 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.35 | PFLU_RS22100 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.56 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
| Pseudomonas aeruginosa PA14 | 0.35 | IKLFDK_04195 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.55 | IKLFDK_23270 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.35 | DY961_RS07780 | rlmD;go_function=RNA | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.54 | DY961_RS22135 | metF;go_function=methylenetetrahydrofolate | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.35 | DQ20_RS45015 | rlmD;go_function=RNA | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.54 | DQ20_RS37170 | metF;go_function=methylenetetrahydrofolate | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 101 |
| Enterobacter asburiae PDN3 | 0.35 | EX28DRAFT_2865 | | 23S rRNA (uracil-5-)-methyltransferase RumA | 0.38 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 76 |
| Pseudomonas simiae WCS417 | 0.35 | PS417_20155 | | 23S rRNA methyltransferase | 0.55 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | low | > 88 |
| Enterobacter sp. TBS_079 | 0.35 | MPMX20_03654 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | low | > 85 |
| Escherichia coli BL21 | 0.35 | ECD_02630 | | 23S rRNA m(5)U1939 methyltransferase, SAM-dependent | 0.38 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | low | > 61 |
| Escherichia coli ECOR38 | 0.35 | HEPCGN_19495 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | low | > 88 |
| Escherichia coli ECOR27 | 0.35 | NOLOHH_12120 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | 0.56 | 26 |
| Escherichia coli Nissle 1917 | 0.34 | ECOLIN_RS15520 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.37 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.34 | OHPLBJKB_00946 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | low | > 74 |
| Escherichia coli BW25113 | 0.34 | b2785 | rumA | 23S rRNA (uracil-5-)-methyltransferase (NCBI) | 0.38 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.25 | 41 |
| Klebsiella pneumoniae MKP103 | 0.34 | KDGMDA_03340 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.39 | KDGMDA_09325 | | methylenetetrahydrofolate reductase | low | > 95 |
| Serratia liquefaciens MT49 | 0.34 | IAI46_03595 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | IAI46_24530 | | methylenetetrahydrofolate reductase | low | > 87 |
| Escherichia coli ECRC62 | 0.34 | BNILDI_10625 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | low | > 75 |
| Escherichia fergusonii Becca | 0.34 | EFB2_01132 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
| Escherichia coli ECRC98 | 0.34 | JDDGAC_23910 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | low | > 87 |
| Escherichia coli ECRC100 | 0.34 | OKFHMN_20245 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | low | > 79 |
| Escherichia coli ECRC102 | 0.34 | NIAGMN_18015 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | low | > 80 |
| Escherichia coli ECRC101 | 0.34 | MCAODC_10770 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | low | > 87 |
| Escherichia coli ECRC99 | 0.34 | KEDOAH_07885 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.34 | GFF4838 | | 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) | 0.38 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 78 |
| Erwinia amylovora T8 | 0.34 | OLJFJH_09240 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | OLJFJH_06105 | | methylenetetrahydrofolate reductase | low | > 58 |
| Pseudomonas fluorescens FW300-N2C3 | 0.34 | AO356_19055 | | 23S rRNA methyltransferase | 0.55 | AO356_13605 | | 5,10-methylenetetrahydrofolate reductase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.34 | Pf1N1B4_3507 | | 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 | 0.54 | Pf1N1B4_2384 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.34 | OH686_18955 | | 23S rRNA (uracil-5-)-methyltransferase RumA | 0.54 | OH686_10820 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 80 |
| Dickeya dianthicola ME23 | 0.33 | DZA65_RS18150 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.37 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | low | > 75 |
| Pseudomonas fluorescens FW300-N2E2 | 0.33 | Pf6N2E2_5722 | | 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 | 0.55 | Pf6N2E2_4638 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 103 |
| Shewanella loihica PV-4 | 0.33 | Shew_1201 | rumA | 23S rRNA 5-methyluridine methyltransferase (RefSeq) | 0.36 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | low | > 60 |
| Pseudomonas segetis P6 | 0.33 | MPMX49_01653 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.56 | MPMX49_00645 | | 5,10-methylenetetrahydrofolate reductase | low | > 75 |
| Shewanella oneidensis MR-1 | 0.33 | SO3456 | | RNA methyltransferase, TrmA family (NCBI ptt file) | 0.36 | SO4054 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.33 | LU632_RS06345 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.36 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | low | > 73 |
| Erwinia tracheiphila HP pepo 2.2 | 0.33 | IJEDHG_17370 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.36 | IJEDHG_13030 | metF | methylenetetrahydrofolate reductase | low | > 61 |
| Klebsiella michiganensis M5al | 0.33 | BWI76_RS22810 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase | 0.39 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | low | > 92 |
| Shewanella sp. ANA-3 | 0.33 | Shewana3_1110 | rumA | 23S rRNA 5-methyluridine methyltransferase (RefSeq) | 0.35 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | low | > 73 |
| Dickeya dadantii 3937 | 0.33 | DDA3937_RS17020 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | low | > 74 |
| Pseudomonas sp. RS175 | 0.33 | PFR28_03224 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.56 | PFR28_04202 | | 5,10-methylenetetrahydrofolate reductase | 0.28 | 80 |
| Vibrio cholerae E7946 ATCC 55056 | 0.33 | CSW01_12410 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.36 | CSW01_13560 | | methylenetetrahydrofolate reductase | low | > 62 |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS17075 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.37 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | low | > 71 |
| Shewanella amazonensis SB2B | 0.32 | Sama_1032 | rumA | 23S rRNA 5-methyluridine methyltransferase (RefSeq) | 0.35 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | low | > 62 |
| Rahnella sp. WP5 | 0.32 | EX31_RS07960 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.39 | EX31_RS14205 | | methylenetetrahydrofolate reductase | low | > 89 |
| Pseudomonas sp. SVBP6 | 0.32 | COO64_RS07330 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.55 | COO64_RS17485 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 93 |
| Pantoea sp. MT58 | 0.32 | IAI47_04115 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | IAI47_00890 | | methylenetetrahydrofolate reductase | low | > 76 |
| Pseudomonas fluorescens FW300-N2E3 | 0.32 | AO353_02715 | | 23S rRNA methyltransferase | 0.55 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | low | > 101 |
| Pseudomonas sp. BP01 | 0.32 | JOY50_RS23905 | rlmD | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.55 | JOY50_RS09810 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 84 |
| Pseudomonas syringae pv. syringae B728a | 0.32 | Psyr_3696 | | 23S rRNA m(5)U-1939 methyltransferase | 0.56 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.32 | Psyr_3696 | | 23S rRNA m(5)U-1939 methyltransferase | 0.56 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
| Pantoea agglomerans CFBP13505 P0401 | 0.32 | PagCFBP13505_RS16855 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.38 | PagCFBP13505_RS18450 | | methylenetetrahydrofolate reductase | low | > 74 |
| Pseudomonas putida KT2440 | 0.32 | PP_1655 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.56 | PP_4977 | | 5,10-methylenetetrahydrofolate reductase | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.31 | PfGW456L13_2033 | | 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 | 0.53 | PfGW456L13_1050 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 87 |
| Alteromonas macleodii MIT1002 | 0.26 | MIT1002_00793 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.34 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | low | > 70 |
| Desulfovibrio vulgaris Miyazaki F | 0.20 | DvMF_1383 | | RNA methyltransferase, TrmA family (RefSeq) | 0.32 | DvMF_3034 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.17 | DVU0924 | rumA | 23S rRNA (uracil-5-)-methyltransferase RumA (TIGR) | 0.32 | DVU0997 | metF | 5,10-methylenetetrahydrofolate reductase (TIGR) | low | > 55 |
| Parabacteroides merdae CL09T00C40 | 0.16 | HMPREF1078_RS02375 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.21 | HMPREF1078_RS07860 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 61 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.16 | Echvi_0172 | | 23S rRNA (uracil-5-)-methyltransferase RumA | 0.21 | Echvi_3637 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 79 |
| Bosea sp. OAE506 | 0.15 | ABIE41_RS22255 | | RNA methyltransferase | 0.37 | ABIE41_RS12475 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 77 |
| Xanthobacter sp. DMC5 | 0.15 | GFF893 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.39 | GFF4147 | | 5,10-methylenetetrahydrofolate reductase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.15 | TX73_004885 | | methyltransferase | 0.36 | TX73_019175 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 86 |
| Rhizobium sp. OAE497 | 0.15 | ABIE40_RS03880 | | class I SAM-dependent RNA methyltransferase | 0.35 | ABIE40_RS11950 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.65 | 53 |
| Dinoroseobacter shibae DFL-12 | 0.14 | Dshi_3492 | | (Uracil-5)-methyltransferase (RefSeq) | 0.30 | Dshi_2080 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
| Agrobacterium fabrum C58 | 0.13 | Atu0735 | | RNA methyltransferase | 0.34 | Atu2123 | | methylenetetrahydrofolate reductase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.13 | SMc00974 | | RNA methyltransferase | 0.32 | SMc01843 | | 5,10-methylenetetrahydrofolate reductase | low | > 103 |
| Caulobacter crescentus NA1000 | 0.13 | CCNA_01387 | | tRNA (uracil-5-)-methyltransferase related protein | 0.33 | CCNA_02224 | | methylenetetrahydrofolate reductase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.13 | CCNA_01387 | | tRNA (uracil-5-)-methyltransferase related protein | 0.33 | CCNA_02224 | | methylenetetrahydrofolate reductase | low | > 67 |
| Sphingobium sp. HT1-2 | 0.13 | GFF99 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) | 0.39 | GFF217 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 95 |
| Magnetospirillum magneticum AMB-1 | 0.13 | AMB_RS01660 | | class I SAM-dependent RNA methyltransferase | 0.38 | AMB_RS02230 | | methylenetetrahydrofolate reductase | — | — |
| Azospirillum brasilense Sp245 | 0.12 | AZOBR_RS01195 | | RNA methyltransferase | 0.37 | AZOBR_RS09540 | | 5 10-methylenetetrahydrofolate reductase | low | > 97 |
| Fusobacterium nucleatum SB010 | 0.12 | HUW76_01255 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.30 | HUW76_02285 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 35 |
| Phaeobacter inhibens DSM 17395 | 0.12 | PGA1_c34810 | | putative RNA methyltransferase | 0.33 | PGA1_c11700 | | 5,10-methylenetetrahydrofolate reductase MetF | low | > 62 |
| Rhodospirillum rubrum S1H | 0.11 | Rru_A2107 | | 23S rRNA (uracil-5-)-methyltransferase RumA (NCBI) | 0.37 | Rru_A1530 | | 5,10-methylenetetrahydrofolate reductase (NCBI) | — | — |
| Azospirillum sp. SherDot2 | 0.11 | MPMX19_02196 | | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | 0.37 | MPMX19_00635 | | 5,10-methylenetetrahydrofolate reductase | low | > 112 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.11 | A4249_RS08425 | | class I SAM-dependent RNA methyltransferase | 0.36 | A4249_RS07925 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 48 |
| Sphingomonas koreensis DSMZ 15582 | 0.10 | Ga0059261_0648 | | SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase | 0.36 | Ga0059261_0992 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 68 |
| Bifidobacterium breve UCC2003 | 0.10 | BBR_RS16615 | | class I SAM-dependent RNA methyltransferase | 0.26 | BBR_RS15410 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 34 |
Not shown: 3 genomes with orthologs for Xcc-8004.3669.1 only; 10 genomes with orthologs for Xcc-8004.4336.1 only