Conservation of cofitness between Xcc-8004.618.1 and Xcc-8004.1053.1 in Xanthomonas campestris pv. campestris strain 8004

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.618.1 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 1.0 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.87 7
Lysobacter sp. OAE881 0.78 ABIE51_RS04175 aminodeoxychorismate/anthranilate synthase component II 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase low > 62
Dyella japonica UNC79MFTsu3.2 0.74 ABZR86_RS12075 aminodeoxychorismate/anthranilate synthase component II 0.39 ABZR86_RS15950 3-isopropylmalate dehydrogenase
Rhodanobacter sp. FW510-T8 0.73 OKGIIK_12290 pabA anthranilate/aminodeoxychorismate synthase component II 0.41 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Rhodanobacter denitrificans FW104-10B01 0.72 LRK54_RS11560 aminodeoxychorismate/anthranilate synthase component II 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase low > 59
Rhodanobacter denitrificans MT42 0.72 LRK55_RS11290 aminodeoxychorismate/anthranilate synthase component II 0.42 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Marinobacter adhaerens HP15 0.72 HP15_3289 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 0.66 HP15_1832 3-isopropylmalate dehydrogenase 0.74 38
Pseudomonas stutzeri RCH2 0.70 Psest_3649 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 0.80 Psest_2589 3-isopropylmalate dehydrogenase 0.79 8
Pseudomonas sp. RS175 0.68 PFR28_04045 Anthranilate synthase component 2 0.78 PFR28_02821 3-isopropylmalate dehydrogenase
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4824 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.79 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.67 6
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_07220 anthranilate synthase 0.77 AO353_20635 3-isopropylmalate dehydrogenase 0.92 4
Pseudomonas putida KT2440 0.68 PP_0420 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex 0.78 PP_1988 3-isopropylmalate dehydrogenase 0.85 7
Pseudomonas sp. S08-1 0.68 OH686_15130 Anthranilate synthase, amidotransferase component or Para-aminobenzoate synthase, amidotransferase component 0.81 OH686_04470 3-isopropylmalate dehydrogenase
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_14430 anthranilate synthase 0.79 AO356_21415 3-isopropylmalate dehydrogenase 0.85 20
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_2547 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.78 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.83 18
Pseudomonas fluorescens SBW25 0.68 PFLU_RS27375 aminodeoxychorismate/anthranilate synthase component II 0.79 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS27375 aminodeoxychorismate/anthranilate synthase component II 0.79 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas fluorescens GW456-L13 0.68 PfGW456L13_1220 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.79 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.83 19
Pseudomonas simiae WCS417 0.67 PS417_25720 anthranilate synthase component II 0.79 PS417_18585 3-isopropylmalate dehydrogenase 0.87 12
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_4581 anthranilate synthase, component II 0.78 Psyr_1985 3-isopropylmalate dehydrogenase 0.76 5
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_4581 anthranilate synthase, component II 0.78 Psyr_1985 3-isopropylmalate dehydrogenase
Dickeya dadantii 3937 0.67 DDA3937_RS19455 aminodeoxychorismate synthase component II 0.47 DDA3937_RS18120 3-isopropylmalate dehydrogenase
Dickeya dianthicola ME23 0.66 DZA65_RS20660 aminodeoxychorismate synthase component II 0.47 DZA65_RS19205 3-isopropylmalate dehydrogenase low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS19575 aminodeoxychorismate synthase component II 0.47 HGI48_RS18060 3-isopropylmalate dehydrogenase
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_13255 aminodeoxychorismate/anthranilate synthase component II 0.48 CSW01_12600 3-isopropylmalate dehydrogenase low > 62
Acinetobacter radioresistens SK82 0.65 MPMX26_00985 Anthranilate synthase component 2 0.67 MPMX26_00348 3-isopropylmalate dehydrogenase 0.94 18
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3709 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.47 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 78
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS19440 anthranilate synthase subunit II 0.59 HSERO_RS16500 3-isopropylmalate dehydrogenase
Ralstonia solanacearum PSI07 0.63 RPSI07_RS10750 type 1 glutamine amidotransferase 0.58 RPSI07_RS14705 3-isopropylmalate dehydrogenase
Ralstonia solanacearum GMI1000 0.63 RS_RS14435 type 1 glutamine amidotransferase 0.59 RS_RS09990 3-isopropylmalate dehydrogenase
Serratia liquefaciens MT49 0.63 IAI46_23595 aminodeoxychorismate synthase component II 0.48 IAI46_03350 3-isopropylmalate dehydrogenase low > 86
Acidovorax sp. GW101-3H11 0.63 Ac3H11_769 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.59 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.88 17
Pectobacterium carotovorum WPP14 0.63 HER17_RS01905 aminodeoxychorismate synthase component II 0.47 HER17_RS03080 3-isopropylmalate dehydrogenase low > 75
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_05714 anthranilate synthase, component II 0.58 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.46 24
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS17395 anthranilate synthase subunit II 0.58 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.90 5
Escherichia coli ECRC99 0.62 KEDOAH_10920 pabA aminodeoxychorismate synthase component 2 0.47 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase
Escherichia coli Nissle 1917 0.62 ECOLIN_RS19245 aminodeoxychorismate synthase component 2 0.47 ECOLIN_RS00395 3-isopropylmalate dehydrogenase 0.56 23
Escherichia coli ECRC98 0.62 JDDGAC_20850 pabA aminodeoxychorismate synthase component 2 0.47 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.62 A4249_RS06165 aminodeoxychorismate/anthranilate synthase component II 0.41 A4249_RS09995 3-isopropylmalate dehydrogenase 0.87 37
Paraburkholderia graminis OAS925 0.62 ABIE53_003641 anthranilate synthase component 2 0.58 ABIE53_004804 3-isopropylmalate dehydrogenase
Escherichia coli ECRC102 0.62 NIAGMN_14990 pabA aminodeoxychorismate synthase component 2 0.47 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase
Escherichia fergusonii Becca 0.62 EFB2_00462 Aminodeoxychorismate synthase component 2 0.47 EFB2_03972 3-isopropylmalate dehydrogenase low > 86
Escherichia coli ECRC101 0.62 MCAODC_07750 pabA aminodeoxychorismate synthase component 2 0.47 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase low > 87
Escherichia coli ECRC100 0.62 OKFHMN_17220 pabA aminodeoxychorismate synthase component 2 0.47 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase low > 80
Escherichia coli ECOR38 0.62 HEPCGN_16050 pabA aminodeoxychorismate synthase component 2 0.47 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase low > 87
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS02145 aminodeoxychorismate/anthranilate synthase component II 0.58 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.79 9
Enterobacter sp. TBS_079 0.62 MPMX20_04263 Aminodeoxychorismate synthase component 2 0.48 MPMX20_00768 3-isopropylmalate dehydrogenase low > 85
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS18300 anthranilate synthase subunit II 0.58 RR42_RS14385 3-isopropylmalate dehydrogenase 0.69 20
Escherichia coli BL21 0.61 ECD_03211 aminodeoxychorismate synthase, subunit II 0.47 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent low > 61
Escherichia coli ECOR27 0.61 NOLOHH_09020 pabA aminodeoxychorismate synthase component 2 0.47 NOLOHH_03065 leuA 2-isopropylmalate synthase low > 75
Escherichia coli ECRC62 0.61 BNILDI_02500 pabA aminodeoxychorismate synthase component 2 0.47 BNILDI_08545 leuA 2-isopropylmalate synthase low > 75
Escherichia coli BW25113 0.61 b3360 pabA para-aminobenzoate synthase component II (NCBI) 0.47 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_00342 Aminodeoxychorismate synthase component 2 0.47 OHPLBJKB_03584 3-isopropylmalate dehydrogenase low > 73
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS27555 aminodeoxychorismate/anthranilate synthase component II 0.57 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.58 104
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS06490 type 1 glutamine amidotransferase 0.58 RALBFv3_RS02610 3-isopropylmalate dehydrogenase low > 76
Ralstonia solanacearum UW163 0.61 UW163_RS07135 type 1 glutamine amidotransferase 0.58 UW163_RS11115 3-isopropylmalate dehydrogenase
Pantoea sp. MT58 0.61 IAI47_01950 aminodeoxychorismate/anthranilate synthase component II 0.45 IAI47_16005 3-isopropylmalate dehydrogenase low > 76
Dechlorosoma suillum PS 0.61 Dsui_0170 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 0.62 Dsui_3198 3-isopropylmalate dehydrogenase
Synechococcus elongatus PCC 7942 0.60 Synpcc7942_0400 trpG anthranilate synthase, component II 0.52 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase
Enterobacter asburiae PDN3 0.60 EX28DRAFT_4169 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 0.49 EX28DRAFT_3669 3-isopropylmalate dehydrogenase low > 76
Castellaniella sp019104865 MT123 0.60 ABCV34_RS10300 aminodeoxychorismate/anthranilate synthase component II 0.60 ABCV34_RS04280 3-isopropylmalate dehydrogenase low > 48
Magnetospirillum magneticum AMB-1 0.60 AMB_RS14405 type 1 glutamine amidotransferase 0.52 AMB_RS20570 3-isopropylmalate dehydrogenase
Rahnella sp. WP5 0.60 EX31_RS04635 aminodeoxychorismate synthase component II 0.48 EX31_RS03685 3-isopropylmalate dehydrogenase low > 89
Klebsiella michiganensis M5al 0.60 BWI76_RS26005 glutamine amidotransferase 0.48 BWI76_RS04675 3-isopropylmalate dehydrogenase low > 92
Phaeobacter inhibens DSM 17395 0.59 PGA1_c16880 anthranilate synthase component II 0.55 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF3107 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.59 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.83 14
Erwinia tracheiphila SCR3 0.59 LU632_RS22815 aminodeoxychorismate synthase component II 0.44 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase
Caulobacter crescentus NA1000 0.59 CCNA_01974 anthranilate synthase component II/para-aminobenzoate synthase glutamine amidotransferase component II 0.48 CCNA_00193 3-isopropylmalate dehydrogenase 0.90 25
Caulobacter crescentus NA1000 Δfur 0.59 CCNA_01974 anthranilate synthase component II/para-aminobenzoate synthase glutamine amidotransferase component II 0.48 CCNA_00193 3-isopropylmalate dehydrogenase low > 67
Dinoroseobacter shibae DFL-12 0.59 Dshi_1798 glutamine amidotransferase of anthranilate synthase (RefSeq) 0.55 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq)
Alteromonas macleodii MIT1002 0.58 MIT1002_00439 Para-aminobenzoate synthase glutamine amidotransferase component II 0.46 MIT1002_00948 3-isopropylmalate dehydrogenase low > 70
Azospirillum sp. SherDot2 0.57 MPMX19_01016 Anthranilate synthase component 2 0.52 MPMX19_00607 3-isopropylmalate dehydrogenase
Variovorax sp. OAS795 0.57 ABID97_RS05260 aminodeoxychorismate/anthranilate synthase component II 0.59 ABID97_RS08455 3-isopropylmalate dehydrogenase
Variovorax sp. SCN45 0.57 GFF5894 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.59 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
Shewanella sp. ANA-3 0.56 Shewana3_0606 aminodeoxychorismate synthase, glutamine amidotransferase subunit (RefSeq) 0.47 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO0613 pabA para-aminobenzoate synthase glutamine amidotransferase, component II (NCBI ptt file) 0.47 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) low > 76
Azospirillum brasilense Sp245 0.55 AZOBR_RS07460 anthranilate synthase 0.51 AZOBR_RS14130 3-isopropylmalate dehydrogenase
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_0926 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 0.53 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.93 38
Rhodospirillum rubrum S1H 0.54 Rru_A1895 Glutamine amidotransferase of anthranilate synthase (NCBI) 0.53 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.79 8
Shewanella loihica PV-4 0.54 Shew_0575 glutamine amidotransferase of anthranilate synthase (RefSeq) 0.47 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.53 Sama_3015 para-aminobenzoate synthase glutamine amidotransferase, component II (RefSeq) 0.47 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) low > 62
Bosea sp. OAE506 0.52 ABIE41_RS17415 aminodeoxychorismate/anthranilate synthase component II 0.49 ABIE41_RS11860 3-isopropylmalate dehydrogenase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.46 ABZR88_RS16600 aminodeoxychorismate/anthranilate synthase component II 0.47 ABZR88_RS11605 3-isopropylmalate dehydrogenase
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_2506 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 0.41 Echvi_2062 3-isopropylmalate dehydrogenase
Mycobacterium tuberculosis H37Rv 0.45 Rv0013 Possible anthranilate synthase component II TrpG (glutamine amidotransferase) 0.26 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH)
Parabacteroides merdae CL09T00C40 0.45 HMPREF1078_RS00140 aminodeoxychorismate/anthranilate synthase component II 0.41 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase low > 61
Phocaeicola vulgatus CL09T03C04 0.44 HMPREF1058_RS07180 aminodeoxychorismate/anthranilate synthase component II 0.39 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.75 43
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS15330 aminodeoxychorismate/anthranilate synthase component II 0.40 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.83 21
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS21055 aminodeoxychorismate/anthranilate synthase component II 0.39 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.66 22
Desulfovibrio vulgaris Hildenborough JW710 0.43 DVU0466 trpG anthranilate synthase, glutamine amidotransferase component (TIGR) 0.53 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.76 26
Bacteroides ovatus ATCC 8483 0.42 BACOVA_03781 glutamine amidotransferase, class I 0.38 BACOVA_04600 3-isopropylmalate dehydrogenase 0.87 4
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_05060 glutamine amidotransferase 0.40 CA264_09445 3-isopropylmalate dehydrogenase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.42 BT0531 anthranilate synthase component II (NCBI ptt file) 0.39 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.72 30
Desulfovibrio vulgaris Miyazaki F 0.42 DvMF_1745 glutamine amidotransferase of anthranilate synthase (RefSeq) 0.57 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.72 17
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS22895 aminodeoxychorismate/anthranilate synthase component II 0.46 CA265_RS15850 3-isopropylmalate dehydrogenase 0.69 15

Not shown: 4 genomes with orthologs for Xcc-8004.618.1 only; 5 genomes with orthologs for Xcc-8004.1053.1 only