Conservation of cofitness between Psyr_1984 and Psyr_4896 in Pseudomonas syringae pv. syringae B728a

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1984 3-isopropylmalate dehydratase, small subunit 1.0 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH 0.85 18
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1984 3-isopropylmalate dehydratase, small subunit 1.00 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH 0.85 23
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_21405 3-isopropylmalate dehydratase 0.91 AO356_09810 imidazole glycerol phosphate synthase subunit HisH 0.80 38
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_20625 3-isopropylmalate dehydratase 0.92 AO353_12075 imidazole glycerol phosphate synthase subunit HisH 0.89 19
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_14 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.93 Pf1N1B4_1626 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_3947 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.92 PfGW456L13_361 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.89 28
Pseudomonas sp. RS175 0.92 PFR28_02823 3-isopropylmalate dehydratase small subunit 1 0.93 PFR28_04930 Imidazole glycerol phosphate synthase subunit HisH 0.53 13
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.91 Pf6N2E2_3841 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.78 27
Pseudomonas putida KT2440 0.91 PP_1986 3-isopropylmalate dehydratase small subunit 0.92 PP_0290 Imidazole glycerol phosphate synthase subunit HisH 0.81 18
Pseudomonas simiae WCS417 0.89 PS417_18595 3-isopropylmalate dehydratase 0.92 PS417_01565 imidazole glycerol phosphate synthase 0.83 20
Pseudomonas fluorescens SBW25 0.89 PFLU_RS20575 3-isopropylmalate dehydratase small subunit 0.91 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH 0.67 5
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS20575 3-isopropylmalate dehydratase small subunit 0.91 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH 0.63 21
Pseudomonas sp. S08-1 0.85 OH686_04475 3-isopropylmalate dehydratase small subunit 0.91 OH686_14580 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.77 14
Pseudomonas stutzeri RCH2 0.84 Psest_2590 3-isopropylmalate dehydratase, small subunit 0.92 Psest_0153 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.87 9
Xanthomonas campestris pv. campestris strain 8004 0.79 Xcc-8004.1050.1 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.31 Xcc-8004.2945.1 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.84 17
Marinobacter adhaerens HP15 0.74 HP15_1833 isopropylmalate isomerase small subunit 0.70 HP15_3011 imidazole glycerol phosphate synthase subunit HisH
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1320 3-isopropylmalate dehydratase, small subunit 0.24 B158DRAFT_2290 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit low > 40
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS14535 3-isopropylmalate dehydratase small subunit 0.43 ABZR87_RS02480 imidazole glycerol phosphate synthase subunit HisH 0.49 58
Ralstonia solanacearum GMI1000 0.73 RS_RS09995 3-isopropylmalate dehydratase small subunit 0.43 RS_RS14770 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS02615 3-isopropylmalate dehydratase small subunit 0.42 RALBFv3_RS06825 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum PSI07 0.72 RPSI07_RS14700 3-isopropylmalate dehydratase small subunit 0.42 RPSI07_RS10410 imidazole glycerol phosphate synthase subunit HisH
Ralstonia solanacearum UW163 0.72 UW163_RS11110 3-isopropylmalate dehydratase small subunit 0.42 UW163_RS06790 imidazole glycerol phosphate synthase subunit HisH
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS16505 3-isopropylmalate dehydratase small subunit 0.44 HSERO_RS20325 IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data) 0.79 34
Acinetobacter radioresistens SK82 0.72 MPMX26_00346 3-isopropylmalate dehydratase small subunit 1 0.55 MPMX26_02846 Imidazole glycerol phosphate synthase subunit HisH 0.91 21
Dechlorosoma suillum PS 0.72 Dsui_3199 3-isopropylmalate dehydratase, small subunit 0.45 Dsui_1416 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Castellaniella sp019104865 MT123 0.71 ABCV34_RS04285 3-isopropylmalate dehydratase small subunit 0.38 ABCV34_RS11240 imidazole glycerol phosphate synthase subunit HisH 0.63 7
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_06073 3-isopropylmalate dehydratase, small subunit 0.42 H281DRAFT_05657 imidazole glycerol phosphate synthase subunit hisH
Variovorax sp. SCN45 0.70 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.48 GFF5350 Imidazole glycerol phosphate synthase amidotransferase subunit HisH
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS33905 3-isopropylmalate dehydratase small subunit 0.43 BPHYT_RS17690 imidazole glycerol phosphate synthase 0.68 31
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS17615 3-isopropylmalate dehydratase small subunit 0.43 QEN71_RS27845 imidazole glycerol phosphate synthase subunit HisH 0.76 33
Hydrogenophaga sp. GW460-11-11-14-LB1 0.70 GFF3361 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.42 GFF1311 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Paraburkholderia graminis OAS925 0.70 ABIE53_004803 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit 0.43 ABIE53_003697 glutamine amidotransferase
Cupriavidus basilensis FW507-4G11 0.70 RR42_RS24180 3-isopropylmalate dehydratase 0.44 RR42_RS18895 imidazole glycerol phosphate synthase
Variovorax sp. OAS795 0.70 ABID97_RS08460 3-isopropylmalate dehydratase small subunit 0.49 ABID97_RS23135 imidazole glycerol phosphate synthase subunit HisH
Acidovorax sp. GW101-3H11 0.67 Ac3H11_1527 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.43 Ac3H11_4731 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-)
Rahnella sp. WP5 0.58 EX31_RS03695 3-isopropylmalate dehydratase small subunit 0.32 EX31_RS11455 imidazole glycerol phosphate synthase subunit HisH 0.94 31
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF167 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.28 GFF3909 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) low > 78
Klebsiella michiganensis M5al 0.57 BWI76_RS04665 3-isopropylmalate dehydratase small subunit 0.30 BWI76_RS18940 imidazole glycerol phosphate synthase subunit HisH 0.90 31
Dickeya dianthicola ME23 0.57 DZA65_RS19215 3-isopropylmalate dehydratase small subunit 0.31 DZA65_RS10040 imidazole glycerol phosphate synthase subunit HisH
Dickeya dianthicola 67-19 0.57 HGI48_RS18070 3-isopropylmalate dehydratase small subunit 0.30 HGI48_RS09730 imidazole glycerol phosphate synthase subunit HisH low > 71
Dickeya dadantii 3937 0.57 DDA3937_RS18130 3-isopropylmalate dehydratase small subunit 0.32 DDA3937_RS09720 imidazole glycerol phosphate synthase subunit HisH 0.68 41
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3667 3-isopropylmalate dehydratase, small subunit 0.29 EX28DRAFT_0536 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.66 44
Escherichia coli ECRC101 0.57 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit 0.28 MCAODC_20440 hisH imidazole glycerol phosphate synthase subunit HisH 0.84 48
Escherichia coli ECRC102 0.57 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit 0.27 NIAGMN_22445 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECRC100 0.57 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit 0.28 OKFHMN_24500 hisH imidazole glycerol phosphate synthase subunit HisH 0.86 64
Escherichia coli ECRC99 0.57 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit 0.28 KEDOAH_03650 hisH imidazole glycerol phosphate synthase subunit HisH
Escherichia coli ECRC98 0.57 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit 0.28 JDDGAC_28610 hisH imidazole glycerol phosphate synthase subunit HisH 0.78 52
Serratia liquefaciens MT49 0.57 IAI46_03340 3-isopropylmalate dehydratase small subunit 0.32 IAI46_08195 imidazole glycerol phosphate synthase subunit HisH low > 86
Escherichia coli BW25113 0.56 b0071 leuD isopropylmalate isomerase small subunit (NCBI) 0.28 b2023 hisH imidazole glycerol phosphate synthase subunit HisH (NCBI) 0.93 19
Escherichia coli BL21 0.56 ECD_00073 3-isopropylmalate dehydratase small subunit 0.28 ECD_01925 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.78 43
Escherichia coli ECOR27 0.56 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit 0.28 NOLOHH_15815 hisH imidazole glycerol phosphate synthase subunit HisH 0.86 47
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit 0.28 OHPLBJKB_01677 Imidazole glycerol phosphate synthase subunit HisH low > 73
Escherichia coli ECRC62 0.56 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit 0.28 BNILDI_14725 hisH imidazole glycerol phosphate synthase subunit HisH 0.94 22
Escherichia coli ECOR38 0.56 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit 0.28 HEPCGN_03205 hisH imidazole glycerol phosphate synthase subunit HisH 0.86 54
Escherichia fergusonii Becca 0.56 EFB2_03974 3-isopropylmalate dehydratase small subunit 0.28 EFB2_01833 Imidazole glycerol phosphate synthase subunit HisH low > 86
Escherichia coli Nissle 1917 0.56 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit 0.28 ECOLIN_RS11960 imidazole glycerol phosphate synthase subunit HisH
Pantoea sp. MT58 0.56 IAI47_16015 3-isopropylmalate dehydratase small subunit 0.30 IAI47_07075 imidazole glycerol phosphate synthase subunit HisH 0.95 23
Enterobacter sp. TBS_079 0.56 MPMX20_00766 3-isopropylmalate dehydratase small subunit 1 0.29 MPMX20_03005 Imidazole glycerol phosphate synthase subunit HisH 0.91 20
Azospirillum sp. SherDot2 0.56 MPMX19_00606 3-isopropylmalate dehydratase small subunit 1 0.37 MPMX19_02545 Imidazole glycerol phosphate synthase subunit HisH
Pectobacterium carotovorum WPP14 0.55 HER17_RS03070 3-isopropylmalate dehydratase small subunit 0.33 HER17_RS12245 imidazole glycerol phosphate synthase subunit HisH 0.94 34
Phaeobacter inhibens DSM 17395 0.55 PGA1_c29790 3-isopropylmalate dehydratase small subunit 0.32 PGA1_c09320 imidazole glycerol phosphate synthase subunit HisH
Magnetospirillum magneticum AMB-1 0.55 AMB_RS20565 3-isopropylmalate dehydratase small subunit 0.33 AMB_RS22935 imidazole glycerol phosphate synthase subunit HisH
Shewanella loihica PV-4 0.55 Shew_3469 isopropylmalate isomerase small subunit (RefSeq) 0.29 Shew_2201 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.97 16
Dinoroseobacter shibae DFL-12 0.55 Dshi_0083 3-isopropylmalate dehydratase, small subunit (RefSeq) 0.30 Dshi_0795 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_12610 3-isopropylmalate dehydratase small subunit 0.33 CSW01_05765 imidazole glycerol phosphate synthase subunit HisH low > 62
Rhodospirillum rubrum S1H 0.53 Rru_A1190 3-isopropylmalate dehydratase small subunit region (NCBI) 0.31 Rru_A3596 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI) low > 58
Sinorhizobium meliloti 1021 0.53 SMc03795 isopropylmalate isomerase small subunit 0.29 SMc02572 imidazole glycerol phosphate synthase subunit HisH 0.82 62
Azospirillum brasilense Sp245 0.53 AZOBR_RS14135 isopropylmalate isomerase 0.36 AZOBR_RS01670 imidazole glycerol phosphate synthase 0.87 13
Rhodopseudomonas palustris CGA009 0.53 TX73_001215 3-isopropylmalate dehydratase small subunit 0.34 TX73_001615 imidazole glycerol phosphate synthase subunit HisH
Agrobacterium fabrum C58 0.52 Atu2790 3-isopropylmalate dehydratase, small subunit 0.28 Atu0041 glutamine amidotransferase 0.81 53
Erwinia tracheiphila SCR3 0.52 LU632_RS02865 leuD 3-isopropylmalate dehydratase small subunit 0.31 LU632_RS08930 hisH imidazole glycerol phosphate synthase subunit HisH 0.80 12
Bosea sp. OAE506 0.51 ABIE41_RS11640 3-isopropylmalate dehydratase small subunit 0.34 ABIE41_RS03955 imidazole glycerol phosphate synthase subunit HisH
Shewanella sp. ANA-3 0.50 Shewana3_3758 leuD isopropylmalate isomerase small subunit (RefSeq) 0.32 Shewana3_1850 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.94 14
Shewanella oneidensis MR-1 0.50 SO4233 leuD 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) 0.31 SO2070 hisH amidotransferase HisH (NCBI ptt file) 0.97 14
Rhizobium sp. OAE497 0.50 ABIE40_RS19040 3-isopropylmalate dehydratase small subunit 0.32 ABIE40_RS19450 imidazole glycerol phosphate synthase subunit HisH 0.93 28
Shewanella amazonensis SB2B 0.49 Sama_0338 leuD isopropylmalate isomerase small subunit (RefSeq) 0.32 Sama_1945 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.93 32
Alteromonas macleodii MIT1002 0.48 MIT1002_00946 3-isopropylmalate dehydratase small subunit 1 0.32 MIT1002_02636 Imidazole glycerol phosphate synthase subunit HisH 0.95 25
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_00195 3-isopropylmalate dehydratase small subunit 0.32 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit low > 67
Caulobacter crescentus NA1000 0.47 CCNA_00195 3-isopropylmalate dehydratase small subunit 0.32 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.96 11
Rhodanobacter denitrificans MT42 0.46 LRK55_RS07100 3-isopropylmalate dehydratase small subunit 0.27 LRK55_RS01370 imidazole glycerol phosphate synthase subunit HisH low > 63
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS07370 3-isopropylmalate dehydratase small subunit 0.27 LRK54_RS01590 imidazole glycerol phosphate synthase subunit HisH low > 59
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS15840 3-isopropylmalate dehydratase small subunit 0.29 CA265_RS03620 imidazole glycerol phosphate synthase subunit HisH 0.92 20
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_09440 3-isopropylmalate dehydratase small subunit 0.31 CA264_05100 imidazole glycerol phosphate synthase subunit HisH low > 74
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_4225 3-isopropylmalate dehydratase, small subunit 0.33 Ga0059261_1046 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.95 30
Lysobacter sp. OAE881 0.40 ABIE51_RS17580 3-isopropylmalate dehydratase small subunit 0.28 ABIE51_RS13310 imidazole glycerol phosphate synthase subunit HisH low > 62
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS15955 3-isopropylmalate dehydratase small subunit 0.33 ABZR86_RS06715 imidazole glycerol phosphate synthase subunit HisH 0.94 12
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS11600 3-isopropylmalate dehydratase small subunit 0.33 ABZR88_RS06865 imidazole glycerol phosphate synthase subunit HisH
Bacteroides stercoris CC31F 0.38 HMPREF1181_RS14140 3-isopropylmalate dehydratase small subunit 0.33 HMPREF1181_RS11080 imidazole glycerol phosphate synthase subunit HisH 0.77 52
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_2060 3-isopropylmalate dehydratase, small subunit 0.30 Echvi_2514 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Phocaeicola vulgatus CL09T03C04 0.37 HMPREF1058_RS14555 3-isopropylmalate dehydratase small subunit 0.33 HMPREF1058_RS06165 imidazole glycerol phosphate synthase subunit HisH low > 67
Phocaeicola dorei CL03T12C01 0.37 ABI39_RS10205 3-isopropylmalate dehydratase small subunit 0.33 ABI39_RS19920 imidazole glycerol phosphate synthase subunit HisH 0.69 57
Parabacteroides merdae CL09T00C40 0.37 HMPREF1078_RS16655 3-isopropylmalate dehydratase small subunit 0.31 HMPREF1078_RS13575 imidazole glycerol phosphate synthase subunit HisH 0.88 14
Bacteroides ovatus ATCC 8483 0.37 BACOVA_04602 3-isopropylmalate dehydratase, small subunit 0.32 BACOVA_00221 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.85 58
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_13590 leuD 3-isopropylmalate dehydratase small subunit 0.27 OKGIIK_04965 hisH imidazole glycerol phosphate synthase subunit HisH low > 52
Mycobacterium tuberculosis H37Rv 0.36 Rv2987c Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) 0.30 Rv1602 Probable amidotransferase HisH
Bifidobacterium breve UCC2003 0.36 BBR_RS19625 3-isopropylmalate dehydratase small subunit 0.28 BBR_RS17035 imidazole glycerol phosphate synthase subunit HisH low > 34
Bacteroides thetaiotaomicron VPI-5482 0.35 BT1859 3-isopropylmalate dehydratase small subunit (NCBI ptt file) 0.32 BT1380 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) 0.69 62
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS10000 3-isopropylmalate dehydratase small subunit 0.32 A4249_RS10705 imidazole glycerol phosphate synthase subunit HisH 0.99 7

Not shown: 0 genomes with orthologs for Psyr_1984 only; 5 genomes with orthologs for Psyr_4896 only