Conservation of cofitness between Psyr_4369 and Psyr_1984 in Pseudomonas syringae pv. syringae B728a

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.0 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.88 13
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.00 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.93 9
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_06495 gamma-glutamyl phosphate reductase 0.92 AO353_20625 3-isopropylmalate dehydratase 0.65 30
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15290 gamma-glutamyl phosphate reductase 0.92 AO356_21405 3-isopropylmalate dehydratase low > 104
Pseudomonas sp. RS175 0.87 PFR28_03872 Gamma-glutamyl phosphate reductase 0.92 PFR28_02823 3-isopropylmalate dehydratase small subunit 1
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2688 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.92 Pf1N1B4_14 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4993 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.91 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 103
Pseudomonas putida KT2440 0.85 PP_4811 Gamma-glutamyl phosphate reductase 0.91 PP_1986 3-isopropylmalate dehydratase small subunit low > 96
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1356 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.92 PfGW456L13_3947 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 87
Pseudomonas fluorescens SBW25 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.89 PFLU_RS20575 3-isopropylmalate dehydratase small subunit
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.89 PFLU_RS20575 3-isopropylmalate dehydratase small subunit
Pseudomonas simiae WCS417 0.75 PS417_24745 gamma-glutamyl phosphate reductase 0.89 PS417_18595 3-isopropylmalate dehydratase 0.58 36
Pseudomonas stutzeri RCH2 0.73 Psest_0508 gamma-glutamyl phosphate reductase 0.84 Psest_2590 3-isopropylmalate dehydratase, small subunit 0.75 23
Pseudomonas sp. S08-1 0.72 OH686_09340 Gamma-glutamyl phosphate reductase 0.85 OH686_04475 3-isopropylmalate dehydratase small subunit low > 80
Marinobacter adhaerens HP15 0.70 HP15_601 gamma-glutamyl phosphate reductase 0.74 HP15_1833 isopropylmalate isomerase small subunit
Acinetobacter radioresistens SK82 0.67 MPMX26_00417 Gamma-glutamyl phosphate reductase 0.72 MPMX26_00346 3-isopropylmalate dehydratase small subunit 1 low > 36
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01395 glutamate-5-semialdehyde dehydrogenase 0.73 ABZR87_RS14535 3-isopropylmalate dehydratase small subunit low > 80
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS26940 glutamate-5-semialdehyde dehydrogenase 0.70 QEN71_RS17615 3-isopropylmalate dehydratase small subunit low > 153
Dechlorosoma suillum PS 0.60 Dsui_1220 gamma-glutamyl phosphate reductase 0.72 Dsui_3199 3-isopropylmalate dehydratase, small subunit
Ralstonia solanacearum PSI07 0.60 RPSI07_RS11475 glutamate-5-semialdehyde dehydrogenase 0.72 RPSI07_RS14700 3-isopropylmalate dehydratase small subunit
Ralstonia solanacearum UW163 0.60 UW163_RS07800 glutamate-5-semialdehyde dehydrogenase 0.72 UW163_RS11110 3-isopropylmalate dehydratase small subunit
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS05825 glutamate-5-semialdehyde dehydrogenase 0.72 RALBFv3_RS02615 3-isopropylmalate dehydratase small subunit low > 76
Ralstonia solanacearum GMI1000 0.59 RS_RS13715 gamma-glutamyl-phosphate reductase 0.73 RS_RS09995 3-isopropylmalate dehydratase small subunit
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS02965 gamma-glutamyl phosphate reductase 0.72 HSERO_RS16505 3-isopropylmalate dehydratase small subunit low > 78
Castellaniella sp019104865 MT123 0.58 ABCV34_RS00845 glutamate-5-semialdehyde dehydrogenase 0.71 ABCV34_RS04285 3-isopropylmalate dehydratase small subunit
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS16770 gamma-glutamyl phosphate reductase 0.70 BPHYT_RS33905 3-isopropylmalate dehydratase small subunit
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_06324 glutamate-5-semialdehyde dehydrogenase 0.71 H281DRAFT_06073 3-isopropylmalate dehydratase, small subunit low > 103
Acidovorax sp. GW101-3H11 0.57 Ac3H11_704 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.67 Ac3H11_1527 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 79
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS17530 gamma-glutamyl phosphate reductase 0.70 RR42_RS24180 3-isopropylmalate dehydratase low > 128
Variovorax sp. SCN45 0.56 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.70 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF2641 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.70 GFF3361 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 90
Paraburkholderia graminis OAS925 0.55 ABIE53_003523 glutamate-5-semialdehyde dehydrogenase 0.70 ABIE53_004803 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit low > 113
Variovorax sp. OAS795 0.54 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase 0.70 ABID97_RS08460 3-isopropylmalate dehydratase small subunit
Magnetospirillum magneticum AMB-1 0.50 AMB_RS20640 glutamate-5-semialdehyde dehydrogenase 0.55 AMB_RS20565 3-isopropylmalate dehydratase small subunit
Rhodospirillum rubrum S1H 0.49 Rru_A1238 Gamma-glutamyl phosphate reductase GPR (NCBI) 0.53 Rru_A1190 3-isopropylmalate dehydratase small subunit region (NCBI)
Azospirillum sp. SherDot2 0.48 MPMX19_01943 Gamma-glutamyl phosphate reductase 0.56 MPMX19_00606 3-isopropylmalate dehydratase small subunit 1
Agrobacterium fabrum C58 0.48 Atu2779 gamma-glutamyl phosphate reductase 0.52 Atu2790 3-isopropylmalate dehydratase, small subunit
Sinorhizobium meliloti 1021 0.48 SMc03777 gamma-glutamyl phosphate reductase 0.53 SMc03795 isopropylmalate isomerase small subunit 0.88 33
Azospirillum brasilense Sp245 0.46 AZOBR_RS04075 gamma-glutamyl phosphate reductase 0.53 AZOBR_RS14135 isopropylmalate isomerase
Rhizobium sp. OAE497 0.46 ABIE40_RS18925 glutamate-5-semialdehyde dehydrogenase 0.50 ABIE40_RS19040 3-isopropylmalate dehydratase small subunit 0.91 27
Dinoroseobacter shibae DFL-12 0.46 Dshi_1469 gamma-glutamyl phosphate reductase (RefSeq) 0.55 Dshi_0083 3-isopropylmalate dehydratase, small subunit (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_2506 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.40 Ga0059261_4225 3-isopropylmalate dehydratase, small subunit 0.95 27
Rhodopseudomonas palustris CGA009 0.45 TX73_000855 glutamate-5-semialdehyde dehydrogenase 0.53 TX73_001215 3-isopropylmalate dehydratase small subunit
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_03543 gamma-glutamyl phosphate reductase 0.47 CCNA_00195 3-isopropylmalate dehydratase small subunit low > 67
Caulobacter crescentus NA1000 0.45 CCNA_03543 gamma-glutamyl phosphate reductase 0.47 CCNA_00195 3-isopropylmalate dehydratase small subunit 0.88 40
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS02370 glutamate-5-semialdehyde dehydrogenase 0.46 LRK54_RS07370 3-isopropylmalate dehydratase small subunit low > 59
Rhodanobacter denitrificans MT42 0.44 LRK55_RS02125 glutamate-5-semialdehyde dehydrogenase 0.46 LRK55_RS07100 3-isopropylmalate dehydratase small subunit low > 63
Lysobacter sp. OAE881 0.44 ABIE51_RS13365 glutamate-5-semialdehyde dehydrogenase 0.40 ABIE51_RS17580 3-isopropylmalate dehydratase small subunit low > 62
Alteromonas macleodii MIT1002 0.44 MIT1002_01885 Gamma-glutamyl phosphate reductase 0.48 MIT1002_00946 3-isopropylmalate dehydratase small subunit 1 0.97 31
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS08680 glutamate-5-semialdehyde dehydrogenase 0.39 ABZR86_RS15955 3-isopropylmalate dehydratase small subunit 0.90 13
Escherichia coli Nissle 1917 0.44 ECOLIN_RS01830 glutamate-5-semialdehyde dehydrogenase 0.56 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit 0.84 29
Klebsiella michiganensis M5al 0.44 BWI76_RS05835 gamma-glutamyl-phosphate reductase 0.57 BWI76_RS04665 3-isopropylmalate dehydratase small subunit 0.86 3
Phaeobacter inhibens DSM 17395 0.44 PGA1_c15520 gamma-glutamyl phosphate reductase ProA 0.55 PGA1_c29790 3-isopropylmalate dehydratase small subunit 0.79 21
Escherichia coli BL21 0.43 ECD_00240 gamma-glutamylphosphate reductase 0.56 ECD_00073 3-isopropylmalate dehydratase small subunit 0.88 24
Escherichia coli ECRC98 0.43 JDDGAC_13295 proA glutamate-5-semialdehyde dehydrogenase 0.57 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit 0.84 47
Escherichia coli ECRC99 0.43 KEDOAH_18485 proA glutamate-5-semialdehyde dehydrogenase 0.57 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC62 0.43 BNILDI_00240 proA glutamate-5-semialdehyde dehydrogenase 0.56 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit 0.92 58
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03397 Gamma-glutamyl phosphate reductase 0.56 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit low > 73
Escherichia coli ECOR27 0.43 NOLOHH_02045 proA glutamate-5-semialdehyde dehydrogenase 0.56 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit 0.91 52
Escherichia coli ECRC102 0.43 NIAGMN_07530 proA glutamate-5-semialdehyde dehydrogenase 0.57 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC101 0.43 MCAODC_00190 proA glutamate-5-semialdehyde dehydrogenase 0.57 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit 0.93 19
Escherichia coli ECOR38 0.43 HEPCGN_07775 proA glutamate-5-semialdehyde dehydrogenase 0.56 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit 0.92 33
Escherichia coli ECRC100 0.43 OKFHMN_09670 proA glutamate-5-semialdehyde dehydrogenase 0.57 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit 0.94 48
Escherichia coli BW25113 0.43 b0243 proA gamma-glutamyl phosphate reductase (NCBI) 0.56 b0071 leuD isopropylmalate isomerase small subunit (NCBI) 0.94 11
Escherichia fergusonii Becca 0.43 EFB2_03777 Gamma-glutamyl phosphate reductase 0.56 EFB2_03974 3-isopropylmalate dehydratase small subunit low > 86
Enterobacter sp. TBS_079 0.43 MPMX20_00928 Gamma-glutamyl phosphate reductase 0.56 MPMX20_00766 3-isopropylmalate dehydratase small subunit 1 0.89 33
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2650 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.57 EX28DRAFT_3667 3-isopropylmalate dehydratase, small subunit 0.77 37
Shewanella sp. ANA-3 0.43 Shewana3_4057 glutamate-5-semialdehyde dehydrogenase (RefSeq) 0.50 Shewana3_3758 leuD isopropylmalate isomerase small subunit (RefSeq) low > 73
Dickeya dadantii 3937 0.43 DDA3937_RS16530 glutamate-5-semialdehyde dehydrogenase 0.57 DDA3937_RS18130 3-isopropylmalate dehydratase small subunit low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.58 GFF167 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 78
Shewanella loihica PV-4 0.43 Shew_3015 gamma-glutamyl phosphate reductase (RefSeq) 0.55 Shew_3469 isopropylmalate isomerase small subunit (RefSeq) low > 60
Rahnella sp. WP5 0.43 EX31_RS20975 glutamate-5-semialdehyde dehydrogenase 0.58 EX31_RS03695 3-isopropylmalate dehydratase small subunit 0.97 19
Dickeya dianthicola ME23 0.42 DZA65_RS17690 glutamate-5-semialdehyde dehydrogenase 0.57 DZA65_RS19215 3-isopropylmalate dehydratase small subunit low > 75
Serratia liquefaciens MT49 0.42 IAI46_04435 glutamate-5-semialdehyde dehydrogenase 0.57 IAI46_03340 3-isopropylmalate dehydratase small subunit low > 86
Pantoea sp. MT58 0.41 IAI47_15115 glutamate-5-semialdehyde dehydrogenase 0.56 IAI47_16015 3-isopropylmalate dehydratase small subunit 0.91 29
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.73 B158DRAFT_1320 3-isopropylmalate dehydratase, small subunit low > 40
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2327.1 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.79 Xcc-8004.1050.1 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 74
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_09415 proA glutamate-5-semialdehyde dehydrogenase 0.36 OKGIIK_13590 leuD 3-isopropylmalate dehydratase small subunit low > 52
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS16120 glutamate-5-semialdehyde dehydrogenase 0.34 A4249_RS10000 3-isopropylmalate dehydratase small subunit 0.98 41
Erwinia tracheiphila SCR3 0.40 LU632_RS01190 proA glutamate-5-semialdehyde dehydrogenase 0.52 LU632_RS02865 leuD 3-isopropylmalate dehydratase small subunit 0.57 74
Bosea sp. OAE506 0.40 ABIE41_RS07580 glutamate-5-semialdehyde dehydrogenase 0.51 ABIE41_RS11640 3-isopropylmalate dehydratase small subunit
Bifidobacterium breve UCC2003 0.40 BBR_RS14075 glutamate-5-semialdehyde dehydrogenase 0.36 BBR_RS19625 3-isopropylmalate dehydratase small subunit low > 34
Mycobacterium tuberculosis H37Rv 0.40 Rv2427c Probable gamma-glutamyl phosphate reductase protein ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) 0.36 Rv2987c Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI)
Dickeya dianthicola 67-19 0.40 HGI48_RS16600 glutamate-5-semialdehyde dehydrogenase 0.57 HGI48_RS18070 3-isopropylmalate dehydratase small subunit low > 71
Pectobacterium carotovorum WPP14 0.40 HER17_RS04705 glutamate-5-semialdehyde dehydrogenase 0.55 HER17_RS03070 3-isopropylmalate dehydratase small subunit 0.94 32
Shewanella oneidensis MR-1 0.39 SO1122 proA gamma-glutamyl phosphate reductase (NCBI ptt file) 0.50 SO4233 leuD 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) 0.98 15
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_11570 glutamate-5-semialdehyde dehydrogenase 0.54 CSW01_12610 3-isopropylmalate dehydratase small subunit low > 62
Shewanella amazonensis SB2B 0.37 Sama_2515 proA gamma-glutamyl phosphate reductase (RefSeq) 0.49 Sama_0338 leuD isopropylmalate isomerase small subunit (RefSeq) 0.93 35
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS03320 glutamate-5-semialdehyde dehydrogenase 0.38 HMPREF1181_RS14140 3-isopropylmalate dehydratase small subunit 0.87 43
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS10655 glutamate-5-semialdehyde dehydrogenase 0.37 HMPREF1078_RS16655 3-isopropylmalate dehydratase small subunit low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_07720 gamma-glutamyl-phosphate reductase 0.40 CA264_09440 3-isopropylmalate dehydratase small subunit low > 74
Bacteroides thetaiotaomicron VPI-5482 0.34 BT3718 gamma-glutamyl phosphate reductase (NCBI ptt file) 0.35 BT1859 3-isopropylmalate dehydratase small subunit (NCBI ptt file) 0.79 46
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS20850 glutamate-5-semialdehyde dehydrogenase 0.42 CA265_RS15840 3-isopropylmalate dehydratase small subunit 0.91 32
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02875 glutamate-5-semialdehyde dehydrogenase 0.37 ABI39_RS10205 3-isopropylmalate dehydratase small subunit 0.81 34
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS22165 glutamate-5-semialdehyde dehydrogenase 0.39 ABZR88_RS11600 3-isopropylmalate dehydratase small subunit
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08645 glutamate-5-semialdehyde dehydrogenase 0.37 HMPREF1058_RS14555 3-isopropylmalate dehydratase small subunit 0.83 37
Bacteroides ovatus ATCC 8483 0.32 BACOVA_03534 glutamate-5-semialdehyde dehydrogenase 0.37 BACOVA_04602 3-isopropylmalate dehydratase, small subunit 0.95 24
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_2633 gamma-glutamylphosphate reductase (EC 1.2.1.41) (from data) 0.37 Echvi_2060 3-isopropylmalate dehydratase, small subunit

Not shown: 3 genomes with orthologs for Psyr_4369 only; 0 genomes with orthologs for Psyr_1984 only