Conservation of cofitness between PP_0872 and PP_4726 in Pseudomonas putida KT2440

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0872 Peptide chain release factor 3 1.0 PP_4726 Chaperone protein DnaJ 0.37 13
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) 0.85 Psyr_4194 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal — —
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_4253 bacterial peptide chain release factor 3 (bRF-3) 0.85 Psyr_4194 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal — —
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_05420 peptide chain release factor 3 0.84 AO353_05645 molecular chaperone DnaJ — —
Pseudomonas simiae WCS417 0.95 PS417_04030 peptide chain release factor 3 0.84 PS417_24055 molecular chaperone DnaJ — —
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_5060 Peptide chain release factor 3 0.83 PfGW456L13_5102 Chaperone protein DnaJ — —
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_07285 peptide chain release factor 3 0.83 AO356_07495 molecular chaperone DnaJ — —
Pseudomonas sp. RS175 0.95 PFR28_00118 Peptide chain release factor RF3 0.83 PFR28_00074 Chaperone protein DnaJ — —
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS04070 peptide chain release factor 3 0.85 PFLU_RS25895 molecular chaperone DnaJ — —
Pseudomonas fluorescens SBW25 0.95 PFLU_RS04070 peptide chain release factor 3 0.85 PFLU_RS25895 molecular chaperone DnaJ — —
Pseudomonas stutzeri RCH2 0.94 Psest_3351 peptide chain release factor 3 0.81 Psest_0965 chaperone protein DnaJ — —
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_3327 Peptide chain release factor 3 0.83 Pf6N2E2_3367 Chaperone protein DnaJ — —
Pseudomonas sp. S08-1 0.92 OH686_08765 peptide chain release factor 3 0.84 OH686_17065 chaperone protein DnaJ — —
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_1130 Peptide chain release factor 3 0.83 Pf1N1B4_1175 Chaperone protein DnaJ — —
Acinetobacter radioresistens SK82 0.72 MPMX26_00476 Peptide chain release factor RF3 0.55 MPMX26_03008 Chaperone protein DnaJ low > 36
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_2239 peptide chain release factor 3 0.63 B158DRAFT_0609 chaperone protein DnaJ low > 40
Pantoea sp. MT58 0.69 IAI47_03375 peptide chain release factor 3 0.66 IAI47_16170 molecular chaperone DnaJ — —
Marinobacter adhaerens HP15 0.69 HP15_541 peptide chain release factor 3 0.66 HP15_3080 chaperone protein dnaJ — —
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_03470 peptide chain release factor 3 0.62 CSW01_04415 molecular chaperone DnaJ — —
Shewanella loihica PV-4 0.69 Shew_2820 prfC peptide chain release factor 3 (RefSeq) 0.66 Shew_2843 chaperone protein DnaJ (RefSeq) — —
Erwinia tracheiphila SCR3 0.69 LU632_RS02475 prfC peptide chain release factor 3 0.67 LU632_RS02660 dnaJ molecular chaperone DnaJ — —
Enterobacter sp. TBS_079 0.68 MPMX20_00673 Peptide chain release factor RF3 0.66 MPMX20_00721 Chaperone protein DnaJ low > 85
Klebsiella michiganensis M5al 0.68 BWI76_RS04100 peptide chain release factor 3 0.66 BWI76_RS04305 molecular chaperone DnaJ low > 92
Shewanella amazonensis SB2B 0.68 Sama_0968 prfC peptide chain release factor 3 (RefSeq) 0.66 Sama_2510 chaperone protein DnaJ (RefSeq) — —
Alteromonas macleodii MIT1002 0.68 MIT1002_01192 Peptide chain release factor 3 0.69 MIT1002_01458 Heat shock protein J — —
Shewanella sp. ANA-3 0.68 Shewana3_1037 prfC peptide chain release factor 3 (RefSeq) 0.66 Shewana3_0960 chaperone protein DnaJ (RefSeq) — —
Serratia liquefaciens MT49 0.68 IAI46_02875 peptide chain release factor 3 0.66 IAI46_03080 molecular chaperone DnaJ low > 86
Enterobacter asburiae PDN3 0.68 EX28DRAFT_3583 peptide chain release factor 3 0.66 EX28DRAFT_3627 chaperone protein DnaJ — —
Dickeya dianthicola ME23 0.68 DZA65_RS02505 peptide chain release factor 3 0.67 DZA65_RS19440 molecular chaperone DnaJ — —
Rahnella sp. WP5 0.68 EX31_RS04095 peptide chain release factor 3 0.63 EX31_RS03895 molecular chaperone DnaJ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF1035 Peptide chain release factor 3 0.66 GFF1090 Chaperone protein DnaJ low > 78
Dickeya dianthicola 67-19 0.68 HGI48_RS02400 peptide chain release factor 3 0.66 HGI48_RS18300 molecular chaperone DnaJ — —
Dickeya dadantii 3937 0.68 DDA3937_RS02445 peptide chain release factor 3 0.66 DDA3937_RS18365 molecular chaperone DnaJ — —
Pectobacterium carotovorum WPP14 0.67 HER17_RS19065 peptide chain release factor 3 0.65 HER17_RS02845 molecular chaperone DnaJ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_03687 Peptide chain release factor RF3 0.67 OHPLBJKB_03646 Chaperone protein DnaJ — —
Escherichia coli Nissle 1917 0.67 ECOLIN_RS25110 peptide chain release factor 3 0.67 ECOLIN_RS00080 molecular chaperone DnaJ low > 52
Escherichia coli ECOR27 0.67 NOLOHH_03600 prfC peptide chain release factor 3 0.67 NOLOHH_03375 dnaJ molecular chaperone DnaJ — —
Escherichia coli BW25113 0.67 b4375 prfC peptide chain release factor 3 (NCBI) 0.67 b0015 dnaJ chaperone Hsp40, co-chaperone with DnaK (NCBI) low > 76
Escherichia coli ECRC101 0.67 MCAODC_01795 prfC peptide chain release factor 3 0.67 MCAODC_01560 dnaJ molecular chaperone DnaJ — —
Escherichia coli ECRC99 0.67 KEDOAH_16865 prfC peptide chain release factor 3 0.67 KEDOAH_17110 dnaJ molecular chaperone DnaJ — —
Escherichia coli ECRC102 0.67 NIAGMN_09130 prfC peptide chain release factor 3 0.67 NIAGMN_08895 dnaJ molecular chaperone DnaJ — —
Escherichia coli ECRC101 0.67 OKFHMN_11280 prfC peptide chain release factor 3 0.67 OKFHMN_11045 dnaJ molecular chaperone DnaJ — —
Escherichia coli BL21 0.67 ECD_04250 peptide chain release factor RF-3 0.67 ECD_00015 chaperone Hsp40, DnaK co-chaperone low > 60
Escherichia coli ECOR38 0.67 HEPCGN_09285 prfC peptide chain release factor 3 0.67 HEPCGN_09045 dnaJ molecular chaperone DnaJ — —
Escherichia coli ECRC62 0.67 BNILDI_08000 prfC peptide chain release factor 3 0.67 BNILDI_08230 dnaJ molecular chaperone DnaJ — —
Escherichia coli ECRC98 0.67 JDDGAC_14875 prfC peptide chain release factor 3 0.67 JDDGAC_14640 dnaJ molecular chaperone DnaJ — —
Escherichia fergusonii Becca 0.67 EFB2_04072 Peptide chain release factor RF3 0.67 EFB2_04029 Chaperone protein DnaJ low > 86
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_01430 prfC peptide chain release factor 3 0.58 OKGIIK_07320 dnaJ molecular chaperone DnaJ — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS19000 peptide chain release factor 3 0.54 ABZR86_RS05645 molecular chaperone DnaJ — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS05155 peptide chain release factor 3 0.59 LRK55_RS17835 molecular chaperone DnaJ — —
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS14640 peptide chain release factor 3 0.56 HSERO_RS03080 molecular chaperone DnaJ — —
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS05380 peptide chain release factor 3 0.59 LRK54_RS17980 molecular chaperone DnaJ — —
Lysobacter sp. OAE881 0.63 ABIE51_RS16210 peptide chain release factor 3 0.56 ABIE51_RS11635 molecular chaperone DnaJ — —
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.1590.1 Peptide chain release factor 3 0.54 Xcc-8004.3426.1 Chaperone protein DnaJ — —
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS37475 peptide chain release factor 3 0.55 RR42_RS17270 molecular chaperone DnaJ — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS23485 peptide chain release factor 3 0.57 ABZR87_RS00970 molecular chaperone DnaJ 0.30 54
Dechlorosoma suillum PS 0.61 Dsui_2418 peptide chain release factor 3 0.63 Dsui_3082 chaperone protein DnaJ — —
Ralstonia solanacearum UW163 0.60 UW163_RS16595 peptide chain release factor 3 0.58 UW163_RS08290 molecular chaperone DnaJ — —
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS23345 peptide chain release factor 3 0.58 RALBFv3_RS05335 molecular chaperone DnaJ — —
Ralstonia solanacearum PSI07 0.60 RPSI07_RS07810 peptide chain release factor 3 0.59 RPSI07_RS11965 molecular chaperone DnaJ — —
Ralstonia solanacearum GMI1000 0.60 RS_RS25080 peptide chain release factor 3 0.59 RS_RS13200 molecular chaperone DnaJ low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.58 DVU3116 prfC peptide chain release factor 3 (TIGR) 0.46 DVU3243 dnaJ dnaJ protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.55 DvMF_2372 prfC peptide chain release factor 3 (RefSeq) 0.45 DvMF_2295 chaperone protein DnaJ (RefSeq) low > 51
Castellaniella sp019104865 MT123 0.54 ABCV34_RS12505 peptide chain release factor 3 0.56 ABCV34_RS07440 molecular chaperone DnaJ — —
Paraburkholderia graminis OAS925 0.54 ABIE53_004717 peptide chain release factor 3 0.58 ABIE53_000865 molecular chaperone DnaJ — —
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_03538 bacterial peptide chain release factor 3 (bRF-3) 0.59 H281DRAFT_04701 molecular chaperone DnaJ — —
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS34275 peptide chain release factor 3 0.59 BPHYT_RS03595 chaperone protein DnaJ — —
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS17200 peptide chain release factor 3 0.59 QEN71_RS26490 molecular chaperone DnaJ — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF768 Peptide chain release factor 3 0.56 GFF3769 Chaperone protein DnaJ — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_3041 Peptide chain release factor 3 0.57 Ac3H11_1520 Chaperone protein DnaJ — —
Variovorax sp. SCN45 0.51 GFF2045 Peptide chain release factor 3 0.58 GFF2930 Chaperone protein DnaJ — —
Magnetospirillum magneticum AMB-1 0.51 AMB_RS01375 peptide chain release factor 3 0.52 AMB_RS22470 molecular chaperone DnaJ — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.50 Echvi_0584 peptide chain release factor 3 0.33 Echvi_0590 DnaJ-class molecular chaperone with C-terminal Zn finger domain low > 79
Sinorhizobium meliloti 1021 0.50 SMc00427 peptide chain release factor RF-3 protein 0.55 SMc02858 chaperone protein DnaJ low > 103
Rhizobium sp. OAE497 0.50 ABIE40_RS01450 peptide chain release factor 3 0.54 ABIE40_RS00450 molecular chaperone DnaJ low > 107
Azospirillum brasilense Sp245 0.49 AZOBR_RS14730 peptide chain release factor 3 0.51 AZOBR_RS02245 molecular chaperone DnaJ — —
Parabacteroides merdae CL09T00C40 0.49 HMPREF1078_RS04145 peptide chain release factor 3 0.36 HMPREF1078_RS07895 molecular chaperone DnaJ low > 61
Agrobacterium fabrum C58 0.48 Atu0315 peptide chain release factor 3 0.55 Atu0121 molecular chaperone, DnaJ family — —
Rhodospirillum rubrum S1H 0.48 Rru_A2497 Peptide chain release factor 3 (NCBI) 0.55 Rru_A3554 Heat shock protein DnaJ (NCBI) — —
Azospirillum sp. SherDot2 0.48 MPMX19_01192 Peptide chain release factor 3 0.51 MPMX19_02597 Chaperone protein DnaJ — —
Bosea sp. OAE506 0.48 ABIE41_RS06180 peptide chain release factor 3 0.56 ABIE41_RS03490 molecular chaperone DnaJ low > 77
Rhodopseudomonas palustris CGA009 0.47 TX73_011820 peptide chain release factor 3 0.52 TX73_001735 molecular chaperone DnaJ low > 86
Phocaeicola vulgatus CL09T03C04 0.46 HMPREF1058_RS07935 peptide chain release factor 3 0.35 HMPREF1058_RS15680 molecular chaperone DnaJ — —
Phocaeicola dorei CL03T12C01 0.46 ABI39_RS00385 peptide chain release factor 3 0.35 ABI39_RS11670 molecular chaperone DnaJ — —
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS18435 peptide chain release factor 3 0.40 CA265_RS03555 molecular chaperone DnaJ — —
Bacteroides ovatus ATCC 8483 0.45 BACOVA_04458 peptide chain release factor 3 0.33 BACOVA_00554 chaperone protein DnaJ — —
Phaeobacter inhibens DSM 17395 0.45 PGA1_c10620 peptide chain release factor 3 0.52 PGA1_c34540 chaperone protein DnaJ — —
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_2044 peptide chain release factor 3 0.43 Ga0059261_3569 chaperone protein DnaJ low > 68
Bacteroides stercoris CC31F 0.45 HMPREF1181_RS05585 peptide chain release factor 3 0.36 HMPREF1181_RS04060 molecular chaperone DnaJ — —
Bacteroides thetaiotaomicron VPI-5482 0.45 BT1729 peptide chain release factor 3 (RF-3) (NCBI ptt file) 0.36 BT1244 chaperone protein dnaJ (NCBI ptt file) — —
Dinoroseobacter shibae DFL-12 0.44 Dshi_1336 peptide chain release factor 3 (RefSeq) 0.51 Dshi_3570 chaperone protein DnaJ (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.44 A4249_RS15275 peptide chain release factor 3 0.48 A4249_RS13640 molecular chaperone DnaJ low > 48
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_01123 peptide chain release factor RF-3 0.50 CCNA_00011 chaperone protein DnaJ low > 67
Caulobacter crescentus NA1000 0.43 CCNA_01123 peptide chain release factor RF-3 0.50 CCNA_00011 chaperone protein DnaJ low > 66
Synechococcus elongatus PCC 7942 0.42 Synpcc7942_2365 prfC peptide chain release factor 3 0.35 Synpcc7942_2074 dnaJ1 Heat shock protein DnaJ low > 38

Not shown: 0 genomes with orthologs for PP_0872 only; 7 genomes with orthologs for PP_4726 only