Conservation of cofitness between PP_4700 and PP_1664 in Pseudomonas putida KT2440

96 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4700 pantothenate synthetase 1.0 PP_1664 phosphoribosylglycinamide formyltransferase 1 0.56 7
Pseudomonas sp. RS175 0.84 PFR28_03722 Pantothenate synthetase 0.80 PFR28_03218 Phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_16055 pantoate--beta-alanine ligase 0.80 AO356_19085 phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_5152 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.80 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Pseudomonas fluorescens FW300-N2E3 0.83 AO353_14380 pantoate--beta-alanine ligase 0.81 AO353_02685 phosphoribosylglycinamide formyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_1520 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.81 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_2853 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.80 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS25755 pantoate--beta-alanine ligase 0.80 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens SBW25 0.80 PFLU_RS25755 pantoate--beta-alanine ligase 0.80 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas simiae WCS417 0.80 PS417_23915 pantoate--beta-alanine ligase 0.80 PS417_20125 phosphoribosylglycinamide formyltransferase low > 88
Pseudomonas sp. S08-1 0.78 OH686_17240 pantoate--beta-alanine ligase 0.78 OH686_18990 phosphoribosylglycinamide formyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_0827 pantothenate synthetase 0.78 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_0827 pantothenate synthetase 0.78 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.49 72
Pseudomonas stutzeri RCH2 0.71 Psest_0995 pantoate--beta-alanine ligase 0.74 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Marinobacter adhaerens HP15 0.63 HP15_323 pantothenate synthetase 0.59 HP15_1298 phosphoribosylglycinamide formyltransferase — —
Shewanella amazonensis SB2B 0.55 Sama_0775 panC pantoate--beta-alanine ligase (RefSeq) 0.56 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.54 SO0869 panC pantoate--beta-alanine ligase (NCBI ptt file) 0.54 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.54 MIT1002_03695 Pantothenate synthetase 0.57 MIT1002_02220 Phosphoribosylglycinamide formyltransferase — —
Shewanella sp. ANA-3 0.54 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq) 0.54 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) — —
Shewanella loihica PV-4 0.53 Shew_3134 pantoate--beta-alanine ligase (RefSeq) 0.54 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) — —
Serratia liquefaciens MT49 0.53 IAI46_21245 pantoate--beta-alanine ligase 0.54 IAI46_18890 phosphoribosylglycinamide formyltransferase low > 86
Escherichia fergusonii Becca 0.53 EFB2_03911 Pantothenate synthetase 0.61 EFB2_01398 Phosphoribosylglycinamide formyltransferase low > 86
Escherichia coli ECOR38 0.52 HEPCGN_08380 panC pantoate--beta-alanine ligase 0.61 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase low > 85
Escherichia coli ECRC99 0.52 KEDOAH_17750 panC pantoate--beta-alanine ligase 0.61 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC98 0.52 JDDGAC_14000 panC pantoate--beta-alanine ligase 0.60 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC102 0.52 NIAGMN_08255 panC pantoate--beta-alanine ligase 0.60 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC101 0.52 OKFHMN_10405 panC pantoate--beta-alanine ligase 0.60 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC101 0.52 MCAODC_00920 panC pantoate--beta-alanine ligase 0.60 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli BW25113 0.52 b0133 panC pantoate--beta-alanine ligase (NCBI) 0.61 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03528 Pantothenate synthetase 0.61 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase low > 73
Escherichia coli BL21 0.52 ECD_00132 pantothenate synthetase 0.61 ECD_02392 phosphoribosylglycinamide formyltransferase 1 low > 60
Escherichia coli ECRC62 0.52 BNILDI_08920 panC pantoate--beta-alanine ligase 0.61 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECOR27 0.52 NOLOHH_02750 panC pantoate--beta-alanine ligase 0.61 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase low > 57
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_0062 pantoate--beta-alanine ligase 0.55 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Pectobacterium carotovorum WPP14 0.51 HER17_RS05555 pantoate--beta-alanine ligase 0.52 HER17_RS15470 phosphoribosylglycinamide formyltransferase low > 75
Dickeya dianthicola ME23 0.51 DZA65_RS17160 pantoate--beta-alanine ligase 0.55 DZA65_RS06415 phosphoribosylglycinamide formyltransferase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF92 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.61 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 78
Dickeya dadantii 3937 0.51 DDA3937_RS15960 pantoate--beta-alanine ligase 0.54 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase low > 74
Klebsiella michiganensis M5al 0.51 BWI76_RS04990 pantoate--beta-alanine ligase 0.60 BWI76_RS20970 phosphoribosylglycinamide formyltransferase low > 92
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS00820 pantoate--beta-alanine ligase 0.42 ABZR86_RS19860 phosphoribosylglycinamide formyltransferase — —
Erwinia tracheiphila SCR3 0.50 LU632_RS20105 panC pantoate--beta-alanine ligase 0.57 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase low > 74
Rhodanobacter denitrificans MT42 0.50 LRK55_RS14835 pantoate--beta-alanine ligase 0.44 LRK55_RS12640 phosphoribosylglycinamide formyltransferase low > 63
Dickeya dianthicola 67-19 0.50 HGI48_RS16075 pantoate--beta-alanine ligase 0.55 HGI48_RS06065 phosphoribosylglycinamide formyltransferase low > 71
Pantoea sp. MT58 0.50 IAI47_15660 pantoate--beta-alanine ligase 0.57 IAI47_05175 phosphoribosylglycinamide formyltransferase low > 76
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_03130 pantoate--beta-alanine ligase 0.60 CSW01_11355 phosphoribosylglycinamide formyltransferase — —
Magnetospirillum magneticum AMB-1 0.50 AMB_RS22115 pantoate--beta-alanine ligase 0.45 AMB_RS14335 phosphoribosylglycinamide formyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS15120 pantoate--beta-alanine ligase 0.44 LRK54_RS12940 phosphoribosylglycinamide formyltransferase — —
Rahnella sp. WP5 0.49 EX31_RS03285 pantoate--beta-alanine ligase 0.57 EX31_RS22690 phosphoribosylglycinamide formyltransferase low > 89
Acinetobacter radioresistens SK82 0.49 MPMX26_00546 Pantothenate synthetase 0.48 MPMX26_02207 Phosphoribosylglycinamide formyltransferase — —
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_03890 panC pantoate--beta-alanine ligase 0.43 OKGIIK_02310 purN phosphoribosylglycinamide formyltransferase low > 52
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3729 pantoate--beta-alanine ligase 0.60 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_00826 Pantothenate synthetase 0.59 MPMX20_03355 Phosphoribosylglycinamide formyltransferase low > 85
Rhodospirillum rubrum S1H 0.46 Rru_A3320 Cytidyltransferase-related (NCBI) 0.51 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) — —
Lysobacter sp. OAE881 0.46 ABIE51_RS08030 pantoate--beta-alanine ligase 0.37 ABIE51_RS15895 phosphoribosylglycinamide formyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_2453 pantoate--beta-alanine ligase 0.36 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Dechlorosoma suillum PS 0.45 Dsui_1470 pantoate--beta-alanine ligase 0.52 Dsui_1545 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Azospirillum brasilense Sp245 0.45 AZOBR_RS09715 pantoate--beta-alanine ligase 0.45 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase low > 97
Ralstonia solanacearum GMI1000 0.44 RS_RS11985 pantoate--beta-alanine ligase 0.54 RS_RS12320 phosphoribosylglycinamide formyltransferase — —
Variovorax sp. OAS795 0.44 ABID97_RS07430 pantoate--beta-alanine ligase 0.42 ABID97_RS07775 phosphoribosylglycinamide formyltransferase 0.69 19
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS04435 pantoate--beta-alanine ligase 0.54 RALBFv3_RS04760 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum UW163 0.44 UW163_RS09235 pantoate--beta-alanine ligase 0.54 UW163_RS08910 phosphoribosylglycinamide formyltransferase — —
Sinorhizobium meliloti 1021 0.44 SMc01880 pantoate--beta-alanine ligase 0.45 SMc00614 phosphoribosylglycinamide formyltransferase 0.66 31
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS15520 pantoate--beta-alanine ligase 0.54 HSERO_RS05910 phosphoribosylglycinamide formyltransferase — —
Dinoroseobacter shibae DFL-12 0.43 Dshi_2952 pantoate--beta-alanine ligase (RefSeq) 0.43 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00150 pantothenate synthetase 0.47 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase — —
Variovorax sp. SCN45 0.43 GFF2578 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.45 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 127
Agrobacterium fabrum C58 0.43 Atu3482 pantoate--beta-alanine ligase 0.41 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 0.87 19
Ralstonia solanacearum PSI07 0.43 RPSI07_RS12935 pantoate--beta-alanine ligase 0.53 RPSI07_RS12625 phosphoribosylglycinamide formyltransferase — —
Caulobacter crescentus NA1000 0.43 CCNA_02247 pantoate-beta-alanine ligase 0.37 CCNA_01774 phosphoribosylglycinamide formyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02247 pantoate-beta-alanine ligase 0.37 CCNA_01774 phosphoribosylglycinamide formyltransferase — —
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS25065 pantoate--beta-alanine ligase 0.53 QEN71_RS03040 phosphoribosylglycinamide formyltransferase — —
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS00030 pantoate--beta-alanine ligase 0.52 ABZR87_RS00380 phosphoribosylglycinamide formyltransferase — —
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS16055 pantothenate synthetase 0.51 RR42_RS17050 phosphoribosylglycinamide formyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS06825 pantoate--beta-alanine ligase 0.33 A4249_RS08220 phosphoribosylglycinamide formyltransferase — —
Rhizobium sp. OAE497 0.42 ABIE40_RS09460 pantoate--beta-alanine ligase 0.45 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase low > 107
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3051.1 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.39 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Paraburkholderia graminis OAS925 0.41 ABIE53_001260 pantoate--beta-alanine ligase 0.51 ABIE53_003298 phosphoribosylglycinamide formyltransferase-1 — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14585 pantoate--beta-alanine ligase 0.49 ABCV34_RS05225 phosphoribosylglycinamide formyltransferase — —
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS04925 pantothenate synthetase 0.54 BPHYT_RS15670 phosphoribosylglycinamide formyltransferase — —
Rhodopseudomonas palustris CGA009 0.40 TX73_016310 pantoate--beta-alanine ligase 0.36 TX73_015790 phosphoribosylglycinamide formyltransferase — —
Azospirillum sp. SherDot2 0.40 MPMX19_04465 Pantothenate synthetase 0.44 MPMX19_01305 Phosphoribosylglycinamide formyltransferase — —
Phaeobacter inhibens DSM 17395 0.40 PGA1_c32040 pantothenate synthetase PanC 0.43 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_3840 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.45 Ac3H11_1709 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_2942 panC pantoate--beta-alanine ligase (RefSeq) 0.35 DvMF_2769 phosphoribosylglycinamide formyltransferase (RefSeq) — —
Bacteroides stercoris CC31F 0.38 HMPREF1181_RS06090 pantoate--beta-alanine ligase 0.25 HMPREF1181_RS02435 phosphoribosylglycinamide formyltransferase — —
Bacteroides ovatus ATCC 8483 0.38 BACOVA_05108 pantoate--beta-alanine ligase 0.26 BACOVA_01954 putative phosphoribosylglycinamide formyltransferase — —
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS14680 pantoate--beta-alanine ligase 0.27 HMPREF1078_RS07090 phosphoribosylglycinamide formyltransferase low > 61
Bacteroides thetaiotaomicron VPI-5482 0.38 BT4308 pantoate--beta-alanine ligase (NCBI ptt file) 0.25 BT3360 phosphoribosylglycinamide formyltransferase (NCBI ptt file) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS18500 pantoate--beta-alanine ligase 0.22 ABZR88_RS01870 phosphoribosylglycinamide formyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_17615 pantoate--beta-alanine ligase 0.30 CA264_18635 phosphoribosylglycinamide formyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU2448 panC pantoate--beta-alanine ligase (TIGR) 0.38 DVU0736 purN phosphoribosylglycinamide formyltransferase (TIGR) low > 55
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF1220 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.46 GFF767 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS18260 pantoate--beta-alanine ligase 0.21 HMPREF1058_RS10780 phosphoribosylglycinamide formyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS22700 pantoate--beta-alanine ligase 0.25 CA265_RS02710 phosphoribosylglycinamide formyltransferase — —
Phocaeicola dorei CL03T12C01 0.35 ABI39_RS14555 pantoate--beta-alanine ligase 0.22 ABI39_RS06315 phosphoribosylglycinamide formyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_1527 pantoate--beta-alanine ligase 0.25 Echvi_1470 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Mycobacterium tuberculosis H37Rv 0.33 Rv3602c Pantoate--beta-alanine ligase PanC (pantothenate synthetase) (pantoate activating enzyme) 0.25 Rv0956 Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase) — —

Not shown: 1 genomes with orthologs for PP_4700 only; 2 genomes with orthologs for PP_1664 only