| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_3225 | | tRNA-dihydrouridine synthase B | 1.0 | HP15_3507 | | aspartate carbamoyltransferase | 0.53 | 20 |
| Pseudomonas stutzeri RCH2 | 0.69 | Psest_1016 | | putative TIM-barrel protein, nifR3 family | 0.74 | Psest_0291 | | aspartate carbamoyltransferase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_3517 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.72 | Pf6N2E2_4606 | | Aspartate carbamoyltransferase (EC 2.1.3.2) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.68 | AO356_08215 | | tRNA-dihydrouridine synthase B | 0.72 | AO356_13450 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Pseudomonas sp. S08-1 | 0.68 | OH686_07610 | | tRNA-dihydrouridine synthase DusB | 0.73 | OH686_10940 | | aspartate carbamoyltransferase | — | — |
| Pseudomonas sp. RS175 | 0.68 | PFR28_05216 | | tRNA-dihydrouridine synthase B | 0.72 | PFR28_04237 | | Aspartate carbamoyltransferase | — | — |
| Pseudomonas putida KT2440 | 0.67 | PP_4820 | | tRNA-dihydrouridine synthase B | 0.71 | PP_4998 | | Aspartate carbamoyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.67 | Psyr_4404 | | tRNA-U20-dihydrouridine synthase | 0.71 | Psyr_0482 | | aspartate carbamoyltransferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.67 | PFLU_RS03025 | | tRNA dihydrouridine synthase DusB | 0.71 | PFLU_RS28345 | | aspartate carbamoyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.67 | Psyr_4404 | | tRNA-U20-dihydrouridine synthase | 0.71 | Psyr_0482 | | aspartate carbamoyltransferase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.67 | PFLU_RS03025 | | tRNA dihydrouridine synthase DusB | 0.71 | PFLU_RS28345 | | aspartate carbamoyltransferase | — | — |
| Pseudomonas simiae WCS417 | 0.67 | PS417_02950 | | tRNA-dihydrouridine synthase B | 0.72 | PS417_26700 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.66 | Pf1N1B4_1313 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.73 | Pf1N1B4_2347 | | Aspartate carbamoyltransferase (EC 2.1.3.2) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.66 | PfGW456L13_55 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.72 | PfGW456L13_1016 | | Aspartate carbamoyltransferase (EC 2.1.3.2) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.66 | AO353_13660 | | tRNA-dihydrouridine synthase B | 0.72 | AO353_08135 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Kangiella aquimarina DSM 16071 | 0.65 | B158DRAFT_0164 | | tRNA-U20-dihydrouridine synthase | 0.21 | B158DRAFT_0021 | | aspartate carbamoyltransferase (EC 2.1.3.2) | — | — |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_03957 | | putative tRNA-dihydrouridine synthase | 0.20 | MIT1002_00423 | | Aspartate carbamoyltransferase catalytic chain | low | > 70 |
| Dechlorosoma suillum PS | 0.60 | Dsui_1593 | | putative TIM-barrel protein, nifR3 family | 0.61 | Dsui_0596 | | aspartate carbamoyltransferase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.60 | HSERO_RS02050 | | tRNA-dihydrouridine synthase B | 0.63 | HSERO_RS02330 | | aspartate carbamoyltransferase | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.60 | QEN71_RS26770 | | tRNA dihydrouridine synthase DusB | 0.64 | QEN71_RS25780 | | aspartate carbamoyltransferase catalytic subunit | low | > 153 |
| Rhodanobacter sp. FW510-T8 | 0.60 | OKGIIK_11770 | dusB | tRNA dihydrouridine synthase DusB | 0.46 | OKGIIK_11095 | pyrB | aspartate carbamoyltransferase catalytic subunit | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.60 | LRK54_RS12140 | | tRNA dihydrouridine synthase DusB | 0.46 | LRK54_RS04220 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.60 | ABZR86_RS11525 | | tRNA dihydrouridine synthase DusB | 0.46 | ABZR86_RS10390 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS11875 | | tRNA dihydrouridine synthase DusB | 0.46 | LRK55_RS03990 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS07650 | | tRNA dihydrouridine synthase DusB | 0.64 | ABZR87_RS08625 | | aspartate carbamoyltransferase catalytic subunit | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_04249 | | tRNA-U20-dihydrouridine synthase | 0.63 | H281DRAFT_04817 | | aspartate carbamoyltransferase | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS21520 | | tRNA dihydrouridine synthase DusB | 0.64 | RPSI07_RS20635 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Lysobacter sp. OAE881 | 0.59 | ABIE51_RS16450 | | tRNA dihydrouridine synthase DusB | 0.46 | ABIE51_RS16015 | | aspartate carbamoyltransferase catalytic subunit | low | > 62 |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS24735 | | tRNA dihydrouridine synthase DusB | 0.63 | ABID97_RS24660 | | aspartate carbamoyltransferase catalytic subunit | low | > 91 |
| Variovorax sp. SCN45 | 0.58 | GFF2144 | | tRNA-dihydrouridine synthase DusB | 0.63 | GFF2160 | | Aspartate carbamoyltransferase (EC 2.1.3.2) | low | > 127 |
| Ralstonia solanacearum GMI1000 | 0.58 | RS_RS02515 | | tRNA dihydrouridine synthase DusB | 0.64 | RS_RS03410 | | aspartate carbamoyltransferase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.58 | CSW01_01495 | | tRNA dihydrouridine synthase DusB | 0.23 | CSW01_12725 | | aspartate carbamoyltransferase | low | > 62 |
| Ralstonia solanacearum UW163 | 0.58 | UW163_RS01890 | | tRNA dihydrouridine synthase DusB | 0.64 | UW163_RS00940 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS11695 | | tRNA dihydrouridine synthase DusB | 0.64 | RALBFv3_RS12625 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Rahnella sp. WP5 | 0.58 | EX31_RS12180 | | tRNA dihydrouridine synthase DusB | 0.23 | EX31_RS12785 | | aspartate carbamoyltransferase | low | > 89 |
| Enterobacter sp. TBS_079 | 0.57 | MPMX20_04169 | | tRNA-dihydrouridine synthase B | 0.23 | MPMX20_00544 | | Aspartate carbamoyltransferase catalytic subunit | low | > 85 |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_003489 | | tRNA-dihydrouridine synthase B | 0.63 | ABIE53_001131 | | aspartate carbamoyltransferase catalytic subunit | 0.19 | 111 |
| Serratia liquefaciens MT49 | 0.57 | IAI46_22775 | | tRNA dihydrouridine synthase DusB | 0.22 | IAI46_02275 | | aspartate carbamoyltransferase | low | > 86 |
| Dickeya dadantii 3937 | 0.57 | DDA3937_RS01375 | | tRNA dihydrouridine synthase DusB | 0.21 | DDA3937_RS01925 | | aspartate carbamoyltransferase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.57 | HGI48_RS01295 | | tRNA dihydrouridine synthase DusB | 0.21 | HGI48_RS01900 | | aspartate carbamoyltransferase | low | > 71 |
| Dickeya dianthicola ME23 | 0.57 | DZA65_RS01355 | | tRNA dihydrouridine synthase DusB | 0.21 | DZA65_RS01970 | | aspartate carbamoyltransferase | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.57 | HER17_RS20235 | | tRNA dihydrouridine synthase DusB | 0.22 | HER17_RS19510 | | aspartate carbamoyltransferase | low | > 75 |
| Escherichia coli ECRC101 | 0.57 | OKFHMN_17685 | dusB | tRNA dihydrouridine synthase DusB | 0.22 | OKFHMN_11865 | pyrB | aspartate carbamoyltransferase | — | — |
| Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS18725 | | tRNA dihydrouridine synthase DusB | 0.22 | ECOLIN_RS24625 | | aspartate carbamoyltransferase | low | > 52 |
| Escherichia coli ECOR38 | 0.57 | HEPCGN_16505 | dusB | tRNA dihydrouridine synthase DusB | 0.22 | HEPCGN_10060 | pyrB | aspartate carbamoyltransferase | low | > 85 |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_09470 | dusB | tRNA dihydrouridine synthase DusB | 0.22 | NOLOHH_04125 | pyrB | aspartate carbamoyltransferase | low | > 57 |
| Escherichia coli BW25113 | 0.57 | b3260 | dusB | tRNA-dihydrouridine synthase B (NCBI) | 0.22 | b4245 | pyrB | aspartate carbamoyltransferase catalytic subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.57 | MCAODC_08205 | dusB | tRNA dihydrouridine synthase DusB | 0.22 | MCAODC_02370 | pyrB | aspartate carbamoyltransferase | — | — |
| Escherichia fergusonii Becca | 0.57 | EFB2_00564 | | tRNA-dihydrouridine synthase B | 0.22 | EFB2_04288 | | Aspartate carbamoyltransferase catalytic subunit | low | > 86 |
| Escherichia coli ECRC102 | 0.57 | NIAGMN_15445 | dusB | tRNA dihydrouridine synthase DusB | 0.22 | NIAGMN_09715 | pyrB | aspartate carbamoyltransferase | — | — |
| Escherichia coli BL21 | 0.57 | ECD_03118 | | tRNA-dihydrouridine synthase B | 0.22 | ECD_04113 | | aspartate carbamoyltransferase, catalytic subunit | low | > 60 |
| Escherichia coli ECRC62 | 0.57 | BNILDI_02050 | dusB | tRNA dihydrouridine synthase DusB | 0.22 | BNILDI_07385 | pyrB | aspartate carbamoyltransferase | — | — |
| Burkholderia phytofirmans PsJN | 0.57 | BPHYT_RS16585 | | tRNA-dihydrouridine synthase B | 0.63 | BPHYT_RS04235 | | aspartate carbamoyltransferase | low | > 109 |
| Shewanella amazonensis SB2B | 0.57 | Sama_3225 | | tRNA-dihydrouridine synthase B (RefSeq) | 0.18 | Sama_0840 | | aspartate carbamoyltransferase (RefSeq) | low | > 62 |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS25565 | | tRNA dihydrouridine synthase DusB | 0.23 | BWI76_RS02995 | | aspartate carbamoyltransferase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS02730 | | tRNA-dihydrouridine synthase B | 0.64 | RR42_RS15860 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Enterobacter asburiae PDN3 | 0.56 | EX28DRAFT_3313 | | putative TIM-barrel protein, nifR3 family | 0.22 | EX28DRAFT_3446 | | aspartate carbamoyltransferase (EC 2.1.3.2) | — | — |
| Shewanella oneidensis MR-1 | 0.55 | SO0394 | | conserved hypothetical protein (NCBI ptt file) | 0.19 | SO1301 | pyrB | aspartate carbamoyltransferase (NCBI ptt file) | low | > 76 |
| Pantoea sp. MT58 | 0.55 | IAI47_02385 | | tRNA dihydrouridine synthase DusB | 0.22 | IAI47_16860 | | aspartate carbamoyltransferase | low | > 76 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.55 | GFF634 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.61 | GFF651 | | Aspartate carbamoyltransferase (EC 2.1.3.2) | low | > 90 |
| Shewanella loihica PV-4 | 0.54 | Shew_0330 | | nifR3 family TIM-barrel protein (RefSeq) | 0.18 | Shew_1013 | | aspartate carbamoyltransferase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_0399 | | nifR3 family TIM-barrel protein (RefSeq) | 0.19 | Shewana3_3070 | | aspartate carbamoyltransferase (RefSeq) | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_02127 | | tRNA-dihydrouridine synthase B | 0.62 | MPMX26_01099 | | Aspartate carbamoyltransferase | low | > 36 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_3996 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.63 | Ac3H11_3978 | | Aspartate carbamoyltransferase (EC 2.1.3.2) | — | — |
| Escherichia coli ECRC98 | 0.51 | JDDGAC_21310 | dusB | tRNA dihydrouridine synthase DusB | 0.22 | JDDGAC_15505 | pyrB | aspartate carbamoyltransferase | — | — |
| Escherichia coli ECRC99 | 0.51 | KEDOAH_10465 | dusB | tRNA dihydrouridine synthase DusB | 0.22 | KEDOAH_16290 | pyrB | aspartate carbamoyltransferase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_00445 | | putative tRNA-dihydrouridine synthase | 0.22 | OHPLBJKB_03789 | | Aspartate carbamoyltransferase catalytic subunit | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.49 | GFF2124 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.23 | GFF930 | | Aspartate carbamoyltransferase (EC 2.1.3.2) | low | > 78 |
| Magnetospirillum magneticum AMB-1 | 0.45 | AMB_RS11940 | | tRNA dihydrouridine synthase DusB | 0.48 | AMB_RS18300 | | aspartate carbamoyltransferase | — | — |
| Azospirillum sp. SherDot2 | 0.43 | MPMX19_01110 | | tRNA-dihydrouridine synthase B | 0.49 | MPMX19_01054 | | Aspartate carbamoyltransferase | low | > 112 |
| Azospirillum brasilense Sp245 | 0.42 | AZOBR_RS14420 | | tRNA-dihydrouridine synthase | 0.49 | AZOBR_RS20575 | | aspartate carbamoyltransferase | low | > 97 |
| Sphingomonas koreensis DSMZ 15582 | 0.41 | Ga0059261_0140 | | tRNA-U20-dihydrouridine synthase | 0.42 | Ga0059261_0076 | | aspartate carbamoyltransferase (EC 2.1.3.2) | — | — |
| Agrobacterium fabrum C58 | 0.38 | Atu1444 | | nitrogen regulation protein | 0.48 | Atu1308 | | aspartate carbamoyl transferase catalytic subunit | low | > 89 |
| Rhizobium sp. OAE497 | 0.37 | ABIE40_RS09080 | | tRNA dihydrouridine synthase DusB | 0.47 | ABIE40_RS07385 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Sinorhizobium meliloti 1021 | 0.37 | SMc01041 | | NIFR3-like protein | 0.49 | SMc01360 | | aspartate carbamoyltransferase catalytic subunit | low | > 103 |
| Phaeobacter inhibens DSM 17395 | 0.37 | PGA1_c14770 | | tRNA-dihydrouridine synthase DusB | 0.47 | PGA1_c03060 | | aspartate carbamoyltransferase PyrB | low | > 62 |
| Rhodospirillum rubrum S1H | 0.35 | Rru_A1676 | | Dihydrouridine synthase TIM-barrel protein nifR3 (NCBI) | 0.47 | Rru_A3190 | | Aspartate carbamoyltransferase (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.35 | TX73_013410 | | tRNA dihydrouridine synthase DusB | 0.48 | TX73_016120 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.35 | A4249_RS04810 | | tRNA dihydrouridine synthase DusB | 0.47 | A4249_RS04260 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.34 | CA265_RS21125 | | tRNA dihydrouridine synthase DusB | 0.46 | CA265_RS14660 | | aspartate carbamoyltransferase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.34 | Dshi_1576 | | putative TIM-barrel protein, nifR3 family (RefSeq) | 0.45 | Dshi_3091 | | aspartate carbamoyltransferase (RefSeq) | low | > 64 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.33 | CA264_17860 | | tRNA dihydrouridine synthase DusB | 0.44 | CA264_20465 | | aspartate carbamoyltransferase | low | > 74 |
| Parabacteroides merdae CL09T00C40 | 0.33 | HMPREF1078_RS05375 | | tRNA dihydrouridine synthase DusB | 0.21 | HMPREF1078_RS01350 | | aspartate carbamoyltransferase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.33 | ABZR88_RS22340 | | tRNA dihydrouridine synthase DusB | 0.45 | ABZR88_RS03460 | | aspartate carbamoyltransferase catalytic subunit | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.32 | Echvi_1531 | | putative TIM-barrel protein, nifR3 family | 0.47 | Echvi_4661 | | aspartate carbamoyltransferase | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.32 | HMPREF1058_RS10945 | | tRNA dihydrouridine synthase DusB | 0.22 | HMPREF1058_RS03820 | | aspartate carbamoyltransferase | — | — |
| Phocaeicola dorei CL03T12C01 | 0.32 | ABI39_RS06125 | | tRNA dihydrouridine synthase DusB | 0.22 | ABI39_RS17400 | | aspartate carbamoyltransferase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.31 | BACOVA_02724 | | TIM-barrel protein, nifR3 family | 0.22 | BACOVA_02450 | | aspartate carbamoyltransferase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.31 | BT3073 | | putative TIM-barrel enzyme, possible dehydrogenase, contains a highly conserved dihydrouridine synthase domain (NCBI ptt file) | 0.22 | BT0742 | | aspartate carbamoyltransferase catalytic chain (NCBI ptt file) | — | — |
| Bacteroides stercoris CC31F | 0.31 | HMPREF1181_RS01530 | | tRNA dihydrouridine synthase DusB | 0.22 | HMPREF1181_RS14990 | | aspartate carbamoyltransferase | low | > 56 |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_01813 | | tRNA-dihydrouridine synthase | 0.46 | CCNA_02525 | | aspartate carbamoyltransferase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_01813 | | tRNA-dihydrouridine synthase | 0.46 | CCNA_02525 | | aspartate carbamoyltransferase | low | > 67 |
| Mycobacterium tuberculosis H37Rv | 0.28 | Rv0823c | | Possible transcriptional regulatory protein | 0.44 | Rv1380 | | Probable aspartate carbamoyltransferase PyrB (ATCase) (aspartate transcarbamylase) | — | — |
| Synechococcus elongatus PCC 7942 | 0.24 | Synpcc7942_0283 | | Dihydrouridine synthase TIM-barrel protein nifR3 | 0.40 | Synpcc7942_0670 | pyrB | aspartate carbamoyltransferase catalytic subunit | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.21 | DVU0661 | | dihydrouridine synthase family protein (TIGR) | 0.43 | DVU2901 | pyrB | aspartate carbamoyltransferase (TIGR) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.20 | DvMF_2019 | | dihydrouridine synthase DuS (RefSeq) | 0.41 | DvMF_1425 | pyrB | aspartate carbamoyltransferase catalytic subunit (RefSeq) | low | > 51 |
Not shown: 2 genomes with orthologs for HP15_3225 only; 6 genomes with orthologs for HP15_3507 only