Conservation of cofitness between PGA1_c14380 and PGA1_c30290 in Phaeobacter inhibens DSM 17395

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c14380 ATP-dependent DNA helicase RecG 1.0 PGA1_c30290 recombination protein RecR 0.51 5
Dinoroseobacter shibae DFL-12 0.64 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) 0.72 Dshi_0648 recombination protein RecR (RefSeq) 0.45 14
Magnetospirillum magneticum AMB-1 0.52 AMB_RS12400 ATP-dependent DNA helicase RecG 0.53 AMB_RS20755 recombination protein RecR — —
Azospirillum sp. SherDot2 0.52 MPMX19_00951 ATP-dependent DNA helicase RecG 0.56 MPMX19_02195 Recombination protein RecR — —
Rhizobium sp. OAE497 0.50 ABIE40_RS09300 ATP-dependent DNA helicase RecG 0.55 ABIE40_RS00300 recombination mediator RecR low > 107
Azospirillum brasilense Sp245 0.50 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.60 AZOBR_RS03880 recombinase RecR 0.41 15
Bosea sp. OAE506 0.48 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.55 ABIE41_RS04035 recombination mediator RecR — —
Agrobacterium fabrum C58 0.48 Atu1780 ATP-dependent DNA helicase 0.58 Atu0093 Recombination protein 0.61 4
Sinorhizobium meliloti 1021 0.47 SMc00228 ATP-dependent DNA helicase RecG 0.59 SMc02908 recombination protein RecR 0.69 10
Caulobacter crescentus NA1000 0.45 CCNA_01504 ATP-dependent DNA helicase recG 0.57 CCNA_00270 Recombination protein recR low > 66
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_01504 ATP-dependent DNA helicase recG 0.57 CCNA_00270 Recombination protein recR low > 67
Rhodopseudomonas palustris CGA009 0.44 TX73_013795 ATP-dependent DNA helicase RecG 0.56 TX73_003195 recombination mediator RecR — —
Rhodospirillum rubrum S1H 0.43 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) 0.56 Rru_A3471 RecR protein (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.58 Ga0059261_0645 DNA replication and repair protein RecR 0.62 8
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS04765 ATP-dependent DNA helicase RecG 0.55 A4249_RS15115 recombination mediator RecR low > 48
Lysobacter sp. OAE881 0.35 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.34 ABIE51_RS14010 recombination mediator RecR low > 62
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.35 Xcc-8004.4012.1 Recombination protein RecR low > 74
Escherichia coli ECRC101 0.34 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.35 MCAODC_27380 recR recombination mediator RecR — —
Escherichia coli ECRC101 0.34 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 0.35 OKFHMN_08155 recR recombination mediator RecR — —
Escherichia coli ECRC98 0.34 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 0.35 JDDGAC_11805 recR recombination mediator RecR — —
Escherichia coli ECRC102 0.34 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 0.35 NIAGMN_06210 recR recombination mediator RecR — —
Escherichia coli ECOR27 0.34 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 0.35 NOLOHH_01085 recR recombination mediator RecR low > 57
Escherichia coli ECRC99 0.34 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 0.35 KEDOAH_19810 recR recombination mediator RecR — —
Escherichia coli ECRC62 0.34 BNILDI_04090 recG ATP-dependent DNA helicase RecG 0.35 BNILDI_22505 recR recombination mediator RecR — —
Escherichia coli BW25113 0.34 b3652 recG ATP-dependent DNA helicase (NCBI) 0.35 b0472 recR recombination protein RecR (NCBI) 0.48 9
Marinobacter adhaerens HP15 0.34 HP15_309 DNA helicase, ATP-dependent, RecG 0.43 HP15_1883 recombination protein RecR — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 0.35 OHPLBJKB_03202 Recombination protein RecR 0.61 65
Escherichia coli BL21 0.34 ECD_03509 ATP-dependent DNA helicase 0.35 ECD_00423 gap repair protein 0.83 7
Pseudomonas simiae WCS417 0.34 PS417_27870 ATP-dependent DNA helicase RecG 0.35 PS417_20800 recombination protein RecR low > 88
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.34 Pf6N2E2_2325 Recombination protein RecR 0.49 8
Escherichia coli ECOR38 0.34 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.35 HEPCGN_06770 recR recombination mediator RecR low > 85
Escherichia coli Nissle 1917 0.34 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.35 ECOLIN_RS02805 recombination mediator RecR — —
Escherichia fergusonii Becca 0.34 EFB2_00136 ATP-dependent DNA helicase RecG 0.35 EFB2_03586 Recombination protein RecR low > 86
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.34 Pf1N1B4_3864 Recombination protein RecR 0.31 50
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_12380 ATP-dependent DNA helicase RecG 0.34 AO356_02495 recombination protein RecR 0.54 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.35 GFF4390 Recombination protein RecR low > 78
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.34 PfGW456L13_4074 Recombination protein RecR 0.34 61
Pseudomonas fluorescens SBW25 0.34 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.35 PFLU_RS22415 recombination protein RecR low > 109
Pantoea sp. MT58 0.34 IAI47_00500 ATP-dependent DNA helicase RecG 0.35 IAI47_14465 recombination protein RecR low > 76
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.35 PFLU_RS22415 recombination protein RecR low > 109
Pseudomonas stutzeri RCH2 0.33 Psest_4192 ATP-dependent DNA helicase RecG 0.34 Psest_2545 recombination protein RecR — —
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG 0.38 HMPREF1058_RS18560 recombination protein RecR low > 67
Shewanella oneidensis MR-1 0.33 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.32 SO2015 recR recombination protein RecR (NCBI ptt file) 0.44 45
Pseudomonas sp. RS175 0.33 PFR28_04435 ATP-dependent DNA helicase RecG 0.34 PFR28_01077 Recombination protein RecR low > 88
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_09320 ATP-dependent DNA helicase RecG 0.34 AO353_00675 recombination protein RecR 0.38 46
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02470 ATP-dependent DNA helicase RecG 0.38 ABI39_RS14870 recombination protein RecR low > 72
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG 0.35 HMPREF1181_RS16455 recombination protein RecR low > 56
Erwinia tracheiphila SCR3 0.33 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.35 LU632_RS18105 recR recombination mediator RecR low > 74
Shewanella sp. ANA-3 0.33 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.33 Shewana3_2444 recR recombination protein RecR (RefSeq) 0.54 9
Enterobacter asburiae PDN3 0.33 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.35 EX28DRAFT_2485 DNA replication and repair protein RecR low > 76
Serratia liquefaciens MT49 0.33 IAI46_24905 ATP-dependent DNA helicase RecG 0.35 IAI46_05240 recombination protein RecR 0.69 14
Klebsiella michiganensis M5al 0.33 BWI76_RS27440 DNA helicase RecG 0.34 BWI76_RS06830 recombination protein RecR low > 92
Pectobacterium carotovorum WPP14 0.33 HER17_RS21395 ATP-dependent DNA helicase RecG 0.36 HER17_RS15695 recombination mediator RecR low > 75
Rahnella sp. WP5 0.33 EX31_RS15820 ATP-dependent DNA helicase RecG 0.36 EX31_RS22525 recombination protein RecR low > 89
Enterobacter sp. TBS_079 0.33 MPMX20_00084 ATP-dependent DNA helicase RecG 0.35 MPMX20_01074 Recombination protein RecR 0.33 53
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.34 ABZR86_RS06235 recombination mediator RecR 0.59 54
Pseudomonas putida KT2440 0.33 PP_5310 junction-specific ATP-dependent DNA helicase 0.33 PP_4267 Recombination protein RecR low > 96
Shewanella amazonensis SB2B 0.33 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.33 Sama_1312 recR recombination protein RecR (RefSeq) 0.40 28
Bacteroides thetaiotaomicron VPI-5482 0.33 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) 0.35 BT1081 recombination protein recR (NCBI ptt file) — —
Dickeya dadantii 3937 0.33 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.36 DDA3937_RS05790 recombination protein RecR low > 74
Ralstonia solanacearum PSI07 0.32 RPSI07_RS11625 DNA helicase RecG 0.32 RPSI07_RS18205 recombination protein RecR low > 81
Ralstonia solanacearum UW163 0.32 UW163_RS07950 DNA helicase RecG 0.32 UW163_RS12640 recombination protein RecR — —
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS05675 DNA helicase RecG 0.32 RALBFv3_RS15170 recombination protein RecR low > 76
Alteromonas macleodii MIT1002 0.32 MIT1002_00111 ATP-dependent DNA helicase RecG 0.34 MIT1002_02649 Recombination protein RecR low > 70
Dickeya dianthicola 67-19 0.32 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.35 HGI48_RS05840 recombination protein RecR — —
Shewanella loihica PV-4 0.32 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.34 Shew_2233 recombination protein RecR (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.32 RS_RS13565 DNA helicase RecG 0.32 RS_RS05980 recombination protein RecR — —
Dickeya dianthicola ME23 0.32 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.35 DZA65_RS06165 recombination protein RecR low > 75
Pseudomonas sp. S08-1 0.32 OH686_13505 ATP-dependent DNA helicase RecG 0.34 OH686_02385 recombination protein RecR low > 80
Synechococcus elongatus PCC 7942 0.32 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG 0.39 Synpcc7942_1369 recR recombination protein RecR — —
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.35 LRK54_RS01250 recombination mediator RecR 0.38 44
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.34 ABZR87_RS10810 recombination mediator RecR low > 80
Acinetobacter radioresistens SK82 0.32 MPMX26_02732 ATP-dependent DNA helicase RecG 0.42 MPMX26_01643 Recombination protein RecR low > 36
Rhodanobacter denitrificans MT42 0.32 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.35 LRK55_RS01020 recombination mediator RecR low > 63
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.35 OKGIIK_05655 recR recombination mediator RecR low > 52
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_0201 ATP-dependent DNA helicase RecG 0.34 Psyr_3396 DNA replication and repair protein RecR 0.53 9
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_0201 ATP-dependent DNA helicase RecG 0.34 Psyr_3396 DNA replication and repair protein RecR 0.37 38
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_15020 DNA helicase RecG 0.38 CA264_01105 recombination protein RecR 0.56 10
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS17390 ATP-dependent DNA helicase RecG 0.33 RR42_RS13270 recombination protein RecR 0.54 4
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_13680 DNA helicase RecG 0.35 CSW01_05375 recombination protein RecR low > 62
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS12765 ATP-dependent DNA helicase RecG 0.35 HMPREF1078_RS07615 recombination mediator RecR — —
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.33 QEN71_RS22285 recombination mediator RecR — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_1162 ATP-dependent DNA helicase RecG 0.37 Echvi_1987 recombination protein RecR 0.83 7
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.36 HSERO_RS18355 recombinase RecR 0.69 1
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.37 B158DRAFT_2480 DNA replication and repair protein RecR low > 40
Dechlorosoma suillum PS 0.31 Dsui_0311 ATP-dependent DNA helicase RecG 0.38 Dsui_1811 recombination protein RecR 0.89 6
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.33 BPHYT_RS09070 recombination protein RecR low > 109
Paraburkholderia graminis OAS925 0.31 ABIE53_000833 ATP-dependent DNA helicase RecG 0.32 ABIE53_002048 recombination protein RecR low > 113
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.33 H281DRAFT_00834 DNA replication and repair protein RecR low > 103
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS22835 ATP-dependent DNA helicase RecG 0.35 CA265_RS04980 recombination protein RecR 0.73 8
Hydrogenophaga sp. GW460-11-11-14-LB1 0.30 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.38 GFF4253 Recombination protein RecR 0.83 1
Variovorax sp. OAS795 0.30 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.35 ABID97_RS14700 recombination mediator RecR low > 91
Acidovorax sp. GW101-3H11 0.30 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.32 Ac3H11_473 Recombination protein RecR low > 79
Castellaniella sp019104865 MT123 0.29 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.29 ABCV34_RS15480 recombination mediator RecR low > 48
Variovorax sp. SCN45 0.28 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.34 GFF1110 Recombination protein RecR low > 127
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS17240 ATP-dependent DNA helicase RecG 0.36 ABZR88_RS10695 recombination mediator RecR low > 71
Fusobacterium nucleatum SB010 0.28 HUW76_01465 ATP-dependent DNA helicase RecG 0.38 HUW76_08785 recombination protein RecR 0.98 10
Mycobacterium tuberculosis H37Rv 0.22 Rv2973c Probable ATP-dependent DNA helicase RecG 0.35 Rv3715c Probable recombination protein RecR low > 58

Not shown: 0 genomes with orthologs for PGA1_c14380 only; 3 genomes with orthologs for PGA1_c30290 only