Conservation of cofitness between HP15_1832 and HP15_2917 in Marinobacter adhaerens HP15

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_1832 3-isopropylmalate dehydrogenase 1.0 HP15_2917 5,10-methylenetetrahydrofolate reductase-like protein 0.96 2
Pseudomonas putida KT2440 0.74 PP_1988 3-isopropylmalate dehydrogenase 0.69 PP_4977 5,10-methylenetetrahydrofolate reductase 0.45 68
Acinetobacter radioresistens SK82 0.73 MPMX26_00348 3-isopropylmalate dehydrogenase 0.61 MPMX26_01002 5,10-methylenetetrahydrofolate reductase low > 36
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.69 Pf6N2E2_4638 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.72 36
Pseudomonas simiae WCS417 0.72 PS417_18585 3-isopropylmalate dehydrogenase 0.68 PS417_26510 5,10-methylenetetrahydrofolate reductase 0.42 81
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_21415 3-isopropylmalate dehydrogenase 0.69 AO356_13605 5,10-methylenetetrahydrofolate reductase 0.95 11
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.68 PFLU_RS28165 methylenetetrahydrofolate reductase [NAD(P)H] 0.78 20
Pseudomonas fluorescens SBW25 0.72 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.68 PFLU_RS28165 methylenetetrahydrofolate reductase [NAD(P)H] 0.68 14
Pseudomonas sp. RS175 0.72 PFR28_02821 3-isopropylmalate dehydrogenase 0.69 PFR28_04202 5,10-methylenetetrahydrofolate reductase 0.77 6
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.67 PfGW456L13_1050 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.94 13
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.68 Pf1N1B4_2384 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.84 20
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_1985 3-isopropylmalate dehydrogenase 0.68 Psyr_0459 5,10-methylenetetrahydrofolate reductase 0.64 56
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_20635 3-isopropylmalate dehydrogenase 0.68 AO353_08015 5,10-methylenetetrahydrofolate reductase 0.86 29
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_1985 3-isopropylmalate dehydrogenase 0.68 Psyr_0459 5,10-methylenetetrahydrofolate reductase low > 86
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.34 B158DRAFT_2461 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) low > 40
Pseudomonas stutzeri RCH2 0.70 Psest_2589 3-isopropylmalate dehydrogenase 0.70 Psest_0313 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.89 16
Pseudomonas sp. S08-1 0.70 OH686_04470 3-isopropylmalate dehydrogenase 0.69 OH686_10820 methylenetetrahydrofolate reductase [NAD(P)H] 0.79 23
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.57 Xcc-8004.4336.1 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) low > 74
Dechlorosoma suillum PS 0.68 Dsui_3198 3-isopropylmalate dehydrogenase 0.63 Dsui_0640 5,10-methylenetetrahydrofolate reductase
Castellaniella sp019104865 MT123 0.65 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.56 ABCV34_RS13550 methylenetetrahydrofolate reductase [NAD(P)H] 0.36 34
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS14385 3-isopropylmalate dehydrogenase 0.64 RR42_RS01385 5,10-methylenetetrahydrofolate reductase 0.77 18
Ralstonia solanacearum GMI1000 0.65 RS_RS09990 3-isopropylmalate dehydrogenase 0.66 RS_RS00460 methylenetetrahydrofolate reductase [NAD(P)H] low > 80
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.65 ABZR87_RS04865 methylenetetrahydrofolate reductase [NAD(P)H] 0.82 28
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.61 QEN71_RS28715 methylenetetrahydrofolate reductase [NAD(P)H] 0.84 3
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.65 RALBFv3_RS09875 methylenetetrahydrofolate reductase [NAD(P)H] 0.57 15
Ralstonia solanacearum UW163 0.64 UW163_RS11115 3-isopropylmalate dehydrogenase 0.65 UW163_RS03705 methylenetetrahydrofolate reductase [NAD(P)H]
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.61 H281DRAFT_05801 5,10-methylenetetrahydrofolate reductase (NAD(P)) 0.66 16
Paraburkholderia graminis OAS925 0.64 ABIE53_004804 3-isopropylmalate dehydrogenase 0.60 ABIE53_000061 methylenetetrahydrofolate reductase (NADPH) 0.92 7
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.62 HSERO_RS21425 5,10-methylenetetrahydrofolate reductase low > 78
Ralstonia solanacearum PSI07 0.64 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.65 RPSI07_RS23495 methylenetetrahydrofolate reductase [NAD(P)H] 0.63 22
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.59 BPHYT_RS18705 5,10-methylenetetrahydrofolate reductase 0.56 88
Acidovorax sp. GW101-3H11 0.63 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.56 Ac3H11_3045 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.89 18
Variovorax sp. SCN45 0.63 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.52 GFF2055 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) low > 127
Variovorax sp. OAS795 0.63 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.52 ABID97_RS25015 methylenetetrahydrofolate reductase [NAD(P)H]
Desulfovibrio vulgaris Miyazaki F 0.62 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.33 DvMF_3034 5,10-methylenetetrahydrofolate reductase (RefSeq)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.58 GFF1692 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Magnetospirillum magneticum AMB-1 0.58 AMB_RS20570 3-isopropylmalate dehydrogenase 0.38 AMB_RS02230 methylenetetrahydrofolate reductase
Desulfovibrio vulgaris Hildenborough JW710 0.58 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.32 DVU0997 metF 5,10-methylenetetrahydrofolate reductase (TIGR) 0.88 20
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.36 Ga0059261_0992 5,10-methylenetetrahydrofolate reductase, prokaryotic form low > 68
Phaeobacter inhibens DSM 17395 0.57 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.33 PGA1_c11700 5,10-methylenetetrahydrofolate reductase MetF 0.91 8
Dinoroseobacter shibae DFL-12 0.57 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) 0.31 Dshi_2080 5,10-methylenetetrahydrofolate reductase (RefSeq)
Agrobacterium fabrum C58 0.57 Atu2791 3-isopropylmalate dehydrogenase 0.32 Atu2123 methylenetetrahydrofolate reductase 0.59 81
Azospirillum sp. SherDot2 0.57 MPMX19_00607 3-isopropylmalate dehydrogenase 0.39 MPMX19_00635 5,10-methylenetetrahydrofolate reductase 0.95 2
Rhizobium sp. OAE497 0.57 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.35 ABIE40_RS11950 methylenetetrahydrofolate reductase [NAD(P)H] 0.98 4
Sinorhizobium meliloti 1021 0.56 SMc04405 3-isopropylmalate dehydrogenase 0.31 SMc01843 5,10-methylenetetrahydrofolate reductase 0.98 5
Azospirillum brasilense Sp245 0.56 AZOBR_RS14130 3-isopropylmalate dehydrogenase 0.39 AZOBR_RS09540 5 10-methylenetetrahydrofolate reductase 0.71 28
Rhodospirillum rubrum S1H 0.56 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.40 Rru_A1530 5,10-methylenetetrahydrofolate reductase (NCBI) 0.89 14
Bosea sp. OAE506 0.55 ABIE41_RS11860 3-isopropylmalate dehydrogenase 0.33 ABIE41_RS12475 methylenetetrahydrofolate reductase [NAD(P)H]
Serratia liquefaciens MT49 0.54 IAI46_03350 3-isopropylmalate dehydrogenase 0.37 IAI46_24530 methylenetetrahydrofolate reductase 0.72 9
Caulobacter crescentus NA1000 0.54 CCNA_00193 3-isopropylmalate dehydrogenase 0.35 CCNA_02224 methylenetetrahydrofolate reductase 0.96 13
Klebsiella michiganensis M5al 0.54 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.38 BWI76_RS00805 5,10-methylenetetrahydrofolate reductase 0.89 23
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00193 3-isopropylmalate dehydrogenase 0.35 CCNA_02224 methylenetetrahydrofolate reductase low > 67
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.38 GFF2329 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) low > 78
Escherichia coli Nissle 1917 0.53 ECOLIN_RS00395 3-isopropylmalate dehydrogenase 0.37 ECOLIN_RS22760 methylenetetrahydrofolate reductase low > 52
Escherichia coli ECRC98 0.53 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.38 JDDGAC_17290 metF methylenetetrahydrofolate reductase
Escherichia coli ECOR38 0.53 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.38 HEPCGN_12310 metF methylenetetrahydrofolate reductase low > 85
Escherichia coli ECRC101 0.53 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.38 MCAODC_04165 metF methylenetetrahydrofolate reductase
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_12600 3-isopropylmalate dehydrogenase 0.37 CSW01_13560 methylenetetrahydrofolate reductase low > 62
Escherichia coli ECRC101 0.53 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.38 OKFHMN_13665 metF methylenetetrahydrofolate reductase
Escherichia coli ECRC99 0.53 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase 0.38 KEDOAH_14495 metF methylenetetrahydrofolate reductase
Escherichia fergusonii Becca 0.53 EFB2_03972 3-isopropylmalate dehydrogenase 0.38 EFB2_04672 5,10-methylenetetrahydrofolate reductase low > 86
Escherichia coli ECRC102 0.53 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase 0.38 NIAGMN_11420 metF methylenetetrahydrofolate reductase
Dickeya dianthicola ME23 0.53 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.37 DZA65_RS21460 methylenetetrahydrofolate reductase 0.76 26
Escherichia coli BL21 0.53 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.38 ECD_03827 5,10-methylenetetrahydrofolate reductase 0.79 10
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_03584 3-isopropylmalate dehydrogenase 0.38 OHPLBJKB_04109 5,10-methylenetetrahydrofolate reductase low > 73
Enterobacter sp. TBS_079 0.53 MPMX20_00768 3-isopropylmalate dehydrogenase 0.38 MPMX20_04529 5,10-methylenetetrahydrofolate reductase 0.74 60
Escherichia coli ECOR27 0.53 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.38 NOLOHH_05810 metF methylenetetrahydrofolate reductase low > 57
Escherichia coli ECRC62 0.53 BNILDI_08545 leuA 2-isopropylmalate synthase 0.38 BNILDI_05725 metF methylenetetrahydrofolate reductase
Escherichia coli BW25113 0.53 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.38 b3941 metF 5,10-methylenetetrahydrofolate reductase (NCBI) 0.96 9
Dickeya dianthicola 67-19 0.53 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.37 HGI48_RS20415 methylenetetrahydrofolate reductase low > 71
Dickeya dadantii 3937 0.53 DDA3937_RS18120 3-isopropylmalate dehydrogenase 0.38 DDA3937_RS00960 methylenetetrahydrofolate reductase low > 74
Rahnella sp. WP5 0.53 EX31_RS03685 3-isopropylmalate dehydrogenase 0.39 EX31_RS14205 methylenetetrahydrofolate reductase 0.92 60
Enterobacter asburiae PDN3 0.53 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.38 EX28DRAFT_4413 5,10-methylenetetrahydrofolate reductase, prokaryotic form low > 76
Rhodopseudomonas palustris CGA009 0.53 TX73_001175 3-isopropylmalate dehydrogenase 0.33 TX73_019175 methylenetetrahydrofolate reductase [NAD(P)H]
Pectobacterium carotovorum WPP14 0.53 HER17_RS03080 3-isopropylmalate dehydrogenase 0.37 HER17_RS00950 methylenetetrahydrofolate reductase low > 75
Shewanella loihica PV-4 0.52 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.37 Shew_0522 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.99 7
Alteromonas macleodii MIT1002 0.52 MIT1002_00948 3-isopropylmalate dehydrogenase 0.36 MIT1002_03670 5,10-methylenetetrahydrofolate reductase low > 70
Pantoea sp. MT58 0.52 IAI47_16005 3-isopropylmalate dehydrogenase 0.37 IAI47_00890 methylenetetrahydrofolate reductase low > 76
Shewanella sp. ANA-3 0.51 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.36 Shewana3_3612 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.97 4
Shewanella oneidensis MR-1 0.51 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.36 SO4054 metF 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) 0.98 12
Shewanella amazonensis SB2B 0.51 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.37 Sama_3169 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.98 6
Erwinia tracheiphila SCR3 0.49 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.35 LU632_RS19630 metF methylenetetrahydrofolate reductase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS15850 3-isopropylmalate dehydrogenase 0.22 CA265_RS23445 methylenetetrahydrofolate reductase [NAD(P)H] 0.94 13
Mucilaginibacter yixingensis YX-36 DSM 26809 0.49 ABZR88_RS11605 3-isopropylmalate dehydrogenase 0.21 ABZR88_RS20935 methylenetetrahydrofolate reductase [NAD(P)H]
Lysobacter sp. OAE881 0.47 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.56 ABIE51_RS16490 methylenetetrahydrofolate reductase [NAD(P)H] 0.98 5
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_2062 3-isopropylmalate dehydrogenase 0.21 Echvi_3637 5,10-methylenetetrahydrofolate reductase, prokaryotic form
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS09995 3-isopropylmalate dehydrogenase 0.36 A4249_RS07925 methylenetetrahydrofolate reductase [NAD(P)H] 0.99 19
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase 0.58 OKGIIK_11830 metF methylenetetrahydrofolate reductase [NAD(P)H] low > 52
Rhodanobacter denitrificans MT42 0.44 LRK55_RS09965 3-isopropylmalate dehydrogenase 0.59 LRK55_RS11765 methylenetetrahydrofolate reductase [NAD(P)H] 0.54 27
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.59 LRK54_RS12030 methylenetetrahydrofolate reductase [NAD(P)H] 0.72 36
Pontibacter actiniarum KMM 6156, DSM 19842 0.43 CA264_09445 3-isopropylmalate dehydrogenase 0.20 CA264_16780 methylenetetrahydrofolate reductase [NAD(P)H] 0.31 64
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.20 HMPREF1078_RS07860 methylenetetrahydrofolate reductase [NAD(P)H] low > 61
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.20 HMPREF1181_RS00120 methylenetetrahydrofolate reductase [NAD(P)H] low > 56
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.22 HMPREF1058_RS01490 methylenetetrahydrofolate reductase [NAD(P)H] low > 67
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.23 ABI39_RS15570 methylenetetrahydrofolate reductase [NAD(P)H] low > 72
Bacteroides thetaiotaomicron VPI-5482 0.41 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.21 BT3821 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) low > 81
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.58 ABZR86_RS11570 methylenetetrahydrofolate reductase [NAD(P)H] 0.96 10
Bacteroides ovatus ATCC 8483 0.40 BACOVA_04600 3-isopropylmalate dehydrogenase 0.17 BACOVA_03666 methylenetetrahydrofolate reductase (NAD(P)H) low > 94

Not shown: 3 genomes with orthologs for HP15_1832 only; 2 genomes with orthologs for HP15_2917 only