Conservation of cofitness between CSW01_09245 and CSW01_13680 in Vibrio cholerae E7946 ATCC 55056

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09245 Holliday junction branch migration protein RuvA 1.0 CSW01_13680 DNA helicase RecG 0.87 2
Escherichia coli BW25113 0.67 b1861 ruvA Holliday junction DNA helicase motor protein (NCBI) 0.68 b3652 recG ATP-dependent DNA helicase (NCBI) 0.39 17
Escherichia fergusonii Becca 0.67 EFB2_02081 Holliday junction ATP-dependent DNA helicase RuvA 0.68 EFB2_00136 ATP-dependent DNA helicase RecG — —
Escherichia coli Nissle 1917 0.67 ECOLIN_RS10365 Holliday junction branch migration protein RuvA 0.68 ECOLIN_RS20800 ATP-dependent DNA helicase RecG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01867 Holliday junction ATP-dependent DNA helicase RuvA 0.68 OHPLBJKB_00049 ATP-dependent DNA helicase RecG — —
Escherichia coli BL21 0.67 ECD_01832 component of RuvABC resolvasome, regulatory subunit 0.68 ECD_03509 ATP-dependent DNA helicase — —
Escherichia coli ECRC62 0.67 BNILDI_15515 ruvA Holliday junction branch migration protein RuvA 0.68 BNILDI_04090 recG ATP-dependent DNA helicase RecG — —
Rahnella sp. WP5 0.66 EX31_RS11675 Holliday junction branch migration protein RuvA 0.67 EX31_RS15820 ATP-dependent DNA helicase RecG 0.59 9
Escherichia coli ECOR27 0.66 NOLOHH_16725 ruvA Holliday junction branch migration protein RuvA 0.68 NOLOHH_07425 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC98 0.66 JDDGAC_00855 ruvA Holliday junction branch migration protein RuvA 0.69 JDDGAC_19170 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECOR38 0.66 HEPCGN_04690 ruvA Holliday junction branch migration protein RuvA 0.68 HEPCGN_14365 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC101 0.66 OKFHMN_26280 ruvA Holliday junction branch migration protein RuvA 0.69 OKFHMN_15545 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC101 0.66 MCAODC_19125 ruvA Holliday junction branch migration protein RuvA 0.69 MCAODC_06055 recG ATP-dependent DNA helicase RecG — —
Enterobacter sp. TBS_079 0.66 MPMX20_02767 Holliday junction ATP-dependent DNA helicase RuvA 0.68 MPMX20_00084 ATP-dependent DNA helicase RecG 0.37 7
Escherichia coli ECRC99 0.66 KEDOAH_01825 ruvA Holliday junction branch migration protein RuvA 0.69 KEDOAH_12600 recG ATP-dependent DNA helicase RecG — —
Escherichia coli ECRC102 0.66 NIAGMN_01780 ruvA Holliday junction branch migration protein RuvA 0.69 NIAGMN_13305 recG ATP-dependent DNA helicase RecG — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0695 Holliday junction DNA helicase subunit RuvA 0.67 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF1640 Holliday junction DNA helicase RuvA 0.69 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Klebsiella michiganensis M5al 0.65 BWI76_RS18150 Holliday junction branch migration protein RuvA 0.68 BWI76_RS27440 DNA helicase RecG — —
Shewanella loihica PV-4 0.64 Shew_2076 Holliday junction DNA helicase RuvA (RefSeq) 0.65 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) — —
Alteromonas macleodii MIT1002 0.63 MIT1002_01332 Holliday junction ATP-dependent DNA helicase RuvA 0.64 MIT1002_00111 ATP-dependent DNA helicase RecG — —
Pantoea sp. MT58 0.63 IAI47_08445 Holliday junction branch migration protein RuvA 0.70 IAI47_00500 ATP-dependent DNA helicase RecG 0.31 3
Shewanella oneidensis MR-1 0.63 SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.53 1
Shewanella sp. ANA-3 0.62 Shewana3_1956 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) low > 73
Dickeya dadantii 3937 0.61 DDA3937_RS10080 Holliday junction branch migration protein RuvA 0.69 DDA3937_RS00170 ATP-dependent DNA helicase RecG — —
Pectobacterium carotovorum WPP14 0.61 HER17_RS11845 Holliday junction branch migration protein RuvA 0.68 HER17_RS21395 ATP-dependent DNA helicase RecG — —
Dickeya dianthicola 67-19 0.61 HGI48_RS10110 Holliday junction branch migration protein RuvA 0.68 HGI48_RS21190 ATP-dependent DNA helicase RecG — —
Dickeya dianthicola ME23 0.61 DZA65_RS10525 Holliday junction branch migration protein RuvA 0.68 DZA65_RS22160 ATP-dependent DNA helicase RecG — —
Erwinia tracheiphila SCR3 0.60 LU632_RS13415 ruvA Holliday junction branch migration protein RuvA 0.67 LU632_RS22190 recG ATP-dependent DNA helicase RecG — —
Shewanella amazonensis SB2B 0.60 Sama_1840 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) — —
Serratia liquefaciens MT49 0.60 IAI46_14625 Holliday junction branch migration protein RuvA 0.69 IAI46_24905 ATP-dependent DNA helicase RecG — —
Pseudomonas putida KT2440 0.57 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 0.56 PP_5310 junction-specific ATP-dependent DNA helicase 0.47 4
Pseudomonas stutzeri RCH2 0.56 Psest_1496 Holliday junction DNA helicase, RuvA subunit 0.57 Psest_4192 ATP-dependent DNA helicase RecG — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.58 3
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.55 Psyr_0201 ATP-dependent DNA helicase RecG — —
Pseudomonas sp. S08-1 0.55 OH686_19130 Holliday junction DNA helicase RuvA 0.56 OH686_13505 ATP-dependent DNA helicase RecG — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_18020 ATP-dependent DNA helicase RuvA 0.55 AO356_12380 ATP-dependent DNA helicase RecG 0.56 3
Pseudomonas sp. RS175 0.55 PFR28_03413 Holliday junction ATP-dependent DNA helicase RuvA 0.55 PFR28_04435 ATP-dependent DNA helicase RecG 0.35 11
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_03585 ATP-dependent DNA helicase RuvA 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.33 1
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_638 Holliday junction DNA helicase RuvA 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5536 Holliday junction DNA helicase RuvA 0.55 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.37 1
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_1852 Holliday junction DNA helicase RuvA 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.40 30
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_1125 Holliday junction DNA helicase subunit RuvA 0.49 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.79 6
Marinobacter adhaerens HP15 0.52 HP15_2041 Holliday junction ATP-dependent DNA helicase RuvA 0.55 HP15_309 DNA helicase, ATP-dependent, RecG — —
Pseudomonas fluorescens SBW25 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.61 52
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.30 35
Pseudomonas simiae WCS417 0.52 PS417_22450 ATP-dependent DNA helicase RuvA 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.39 1
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS04910 Holliday junction branch migration protein RuvA 0.50 LRK54_RS11805 ATP-dependent DNA helicase RecG — —
Rhodanobacter denitrificans MT42 0.48 LRK55_RS04690 Holliday junction branch migration protein RuvA 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS10840 Holliday junction branch migration protein RuvA 0.51 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.65 5
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_01840 ruvA Holliday junction branch migration protein RuvA 0.50 OKGIIK_12090 recG ATP-dependent DNA helicase RecG — —
Lysobacter sp. OAE881 0.44 ABIE51_RS05045 Holliday junction branch migration protein RuvA 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG low > 62
Dechlorosoma suillum PS 0.43 Dsui_0485 Holliday junction DNA helicase, RuvA subunit 0.42 Dsui_0311 ATP-dependent DNA helicase RecG — —
Acinetobacter radioresistens SK82 0.42 MPMX26_02185 Holliday junction ATP-dependent DNA helicase RuvA 0.52 MPMX26_02732 ATP-dependent DNA helicase RecG low > 36
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1436.1 Holliday junction DNA helicase RuvA 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 74
Variovorax sp. SCN45 0.41 GFF2073 Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.72 62
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS16615 holliday junction ATP-dependent DNA helicase RuvA 0.44 BPHYT_RS03400 ATP-dependent DNA helicase RecG — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS07980 Holliday junction branch migration protein RuvA 0.41 ABCV34_RS03570 ATP-dependent DNA helicase RecG low > 48
Variovorax sp. OAS795 0.39 ABID97_RS24920 Holliday junction branch migration protein RuvA 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1666 Holliday junction DNA helicase RuvA 0.40 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.63 5
Ralstonia solanacearum GMI1000 0.38 RS_RS02490 Holliday junction branch migration protein RuvA 0.45 RS_RS13565 DNA helicase RecG — —
Paraburkholderia graminis OAS925 0.38 ABIE53_003494 Holliday junction DNA helicase RuvA 0.44 ABIE53_000833 ATP-dependent DNA helicase RecG 0.39 7
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS07625 Holliday junction branch migration protein RuvA 0.45 ABZR87_RS01270 ATP-dependent DNA helicase RecG low > 80
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS11670 Holliday junction branch migration protein RuvA 0.45 RALBFv3_RS05675 DNA helicase RecG — —
Ralstonia solanacearum UW163 0.38 UW163_RS01915 Holliday junction branch migration protein RuvA 0.45 UW163_RS07950 DNA helicase RecG — —
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_04254 Holliday junction DNA helicase subunit RuvA 0.44 H281DRAFT_04672 ATP-dependent DNA helicase RecG — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS26795 Holliday junction branch migration protein RuvA 0.44 QEN71_RS26630 ATP-dependent DNA helicase RecG — —
Ralstonia solanacearum PSI07 0.37 RPSI07_RS21550 Holliday junction branch migration protein RuvA 0.45 RPSI07_RS11625 DNA helicase RecG — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS02090 Holliday junction DNA helicase RuvA 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.56 1
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS02705 Holliday junction DNA helicase RuvA 0.45 RR42_RS17390 ATP-dependent DNA helicase RecG 0.53 2
Acidovorax sp. GW101-3H11 0.37 Ac3H11_4683 Holliday junction DNA helicase RuvA 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_14545 Holliday junction branch migration protein RuvA 0.31 CA264_15020 DNA helicase RecG — —
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_2298 ruvA Holliday junction DNA helicase motor protein 0.35 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG — —
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS18995 Holliday junction branch migration protein RuvA 0.30 CA265_RS22835 ATP-dependent DNA helicase RecG 0.58 3
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_4082 Holliday junction DNA helicase, RuvA subunit 0.32 Echvi_1162 ATP-dependent DNA helicase RecG 0.33 14
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS18310 Holliday junction branch migration protein RuvA 0.29 ABZR88_RS17240 ATP-dependent DNA helicase RecG — —
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS13015 Holliday junction branch migration protein RuvA 0.33 HMPREF1078_RS12765 ATP-dependent DNA helicase RecG — —
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS15860 Holliday junction branch migration protein RuvA 0.30 A4249_RS04765 ATP-dependent DNA helicase RecG — —
Rhodopseudomonas palustris CGA009 0.25 TX73_005655 Holliday junction branch migration protein RuvA 0.29 TX73_013795 ATP-dependent DNA helicase RecG — —
Rhodospirillum rubrum S1H 0.24 Rru_A1088 DNA recombination protein RuvA (NCBI) 0.29 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_0820 Holliday junction DNA helicase subunit RuvA 0.31 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) — —
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS07915 Holliday junction branch migration protein RuvA 0.33 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG low > 56
Magnetospirillum magneticum AMB-1 0.23 AMB_RS16255 Holliday junction branch migration protein RuvA 0.34 AMB_RS12400 ATP-dependent DNA helicase RecG — —
Bosea sp. OAE506 0.23 ABIE41_RS09475 Holliday junction branch migration protein RuvA 0.31 ABIE41_RS15815 ATP-dependent DNA helicase RecG — —
Bacteroides thetaiotaomicron VPI-5482 0.23 BT1978 Holliday junction DNA helicase ruvA (NCBI ptt file) 0.33 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) — —
Mycobacterium tuberculosis H37Rv 0.23 Rv2593c Probable holliday junction DNA helicase RuvA 0.24 Rv2973c Probable ATP-dependent DNA helicase RecG — —
Fusobacterium nucleatum SB010 0.23 HUW76_06655 Holliday junction branch migration protein RuvA 0.32 HUW76_01465 ATP-dependent DNA helicase RecG 0.99 3
Rhizobium sp. OAE497 0.22 ABIE40_RS15745 Holliday junction branch migration protein RuvA 0.34 ABIE40_RS09300 ATP-dependent DNA helicase RecG low > 107
Sinorhizobium meliloti 1021 0.22 SMc03966 Holliday junction DNA helicase RuvA 0.35 SMc00228 ATP-dependent DNA helicase RecG — —
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS08200 Holliday junction branch migration protein RuvA 0.33 ABI39_RS02470 ATP-dependent DNA helicase RecG — —
Phaeobacter inhibens DSM 17395 0.22 PGA1_c05860 holliday junction ATP-dependent DNA helicase RuvA 0.32 PGA1_c14380 ATP-dependent DNA helicase RecG 0.43 7
Agrobacterium fabrum C58 0.22 Atu3723 Holliday junction DNA helicase RuvA 0.33 Atu1780 ATP-dependent DNA helicase — —
Dinoroseobacter shibae DFL-12 0.21 Dshi_1104 Holliday junction DNA helicase RuvA (RefSeq) 0.32 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) — —
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS00595 Holliday junction branch migration protein RuvA 0.34 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG 0.63 15
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_03345 Holliday junction DNA helicase RuvA 0.33 CCNA_01504 ATP-dependent DNA helicase recG — —
Caulobacter crescentus NA1000 0.21 CCNA_03345 Holliday junction DNA helicase RuvA 0.33 CCNA_01504 ATP-dependent DNA helicase recG low > 66
Azospirillum brasilense Sp245 0.20 AZOBR_RS09045 Holliday junction DNA helicase RuvA 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG — —
Azospirillum sp. SherDot2 0.19 MPMX19_00697 Holliday junction ATP-dependent DNA helicase RuvA 0.34 MPMX19_00951 ATP-dependent DNA helicase RecG — —

Not shown: 3 genomes with orthologs for CSW01_09245 only; 0 genomes with orthologs for CSW01_13680 only