Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_09245 | | Holliday junction branch migration protein RuvA | 1.0 | CSW01_13560 | | methylenetetrahydrofolate reductase | 0.76 | 10 |
Escherichia fergusonii Becca | 0.67 | EFB2_02081 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.78 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Escherichia coli BW25113 | 0.67 | b1861 | ruvA | Holliday junction DNA helicase motor protein (NCBI) | 0.79 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_01867 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.79 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS10365 | | Holliday junction branch migration protein RuvA | 0.78 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | — | — |
Escherichia coli BL21 | 0.67 | ECD_01832 | | component of RuvABC resolvasome, regulatory subunit | 0.79 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC62 | 0.67 | BNILDI_15515 | ruvA | Holliday junction branch migration protein RuvA | 0.79 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECOR27 | 0.66 | NOLOHH_16725 | ruvA | Holliday junction branch migration protein RuvA | 0.79 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC101 | 0.66 | OKFHMN_26280 | ruvA | Holliday junction branch migration protein RuvA | 0.79 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC101 | 0.66 | MCAODC_19125 | ruvA | Holliday junction branch migration protein RuvA | 0.79 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC98 | 0.66 | JDDGAC_00855 | ruvA | Holliday junction branch migration protein RuvA | 0.79 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | — | — |
Enterobacter sp. TBS_079 | 0.66 | MPMX20_02767 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.79 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | low | > 85 |
Rahnella sp. WP5 | 0.66 | EX31_RS11675 | | Holliday junction branch migration protein RuvA | 0.78 | EX31_RS14205 | | methylenetetrahydrofolate reductase | low | > 89 |
Escherichia coli ECRC102 | 0.66 | NIAGMN_01780 | ruvA | Holliday junction branch migration protein RuvA | 0.79 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC99 | 0.66 | KEDOAH_01825 | ruvA | Holliday junction branch migration protein RuvA | 0.79 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECOR38 | 0.66 | HEPCGN_04690 | ruvA | Holliday junction branch migration protein RuvA | 0.78 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | — | — |
Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_0695 | | Holliday junction DNA helicase subunit RuvA | 0.79 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.65 | GFF1640 | | Holliday junction DNA helicase RuvA | 0.77 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
Klebsiella michiganensis M5al | 0.65 | BWI76_RS18150 | | Holliday junction branch migration protein RuvA | 0.78 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Shewanella loihica PV-4 | 0.64 | Shew_2076 | | Holliday junction DNA helicase RuvA (RefSeq) | 0.74 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
Alteromonas macleodii MIT1002 | 0.63 | MIT1002_01332 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.66 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Pantoea sp. MT58 | 0.63 | IAI47_08445 | | Holliday junction branch migration protein RuvA | 0.78 | IAI47_00890 | | methylenetetrahydrofolate reductase | low | > 76 |
Shewanella oneidensis MR-1 | 0.63 | SO2430 | ruvA | Holliday junction DNA helicase RuvA (NCBI ptt file) | 0.73 | SO4054 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | low | > 76 |
Shewanella sp. ANA-3 | 0.62 | Shewana3_1956 | ruvA | Holliday junction DNA helicase RuvA (RefSeq) | 0.73 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | low | > 73 |
Dickeya dadantii 3937 | 0.61 | DDA3937_RS10080 | | Holliday junction branch migration protein RuvA | 0.79 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | — | — |
Dickeya dianthicola 67-19 | 0.61 | HGI48_RS10110 | | Holliday junction branch migration protein RuvA | 0.80 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | — | — |
Dickeya dianthicola ME23 | 0.61 | DZA65_RS10525 | | Holliday junction branch migration protein RuvA | 0.79 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | — | — |
Pectobacterium carotovorum WPP14 | 0.61 | HER17_RS11845 | | Holliday junction branch migration protein RuvA | 0.76 | HER17_RS00950 | | methylenetetrahydrofolate reductase | — | — |
Erwinia tracheiphila SCR3 | 0.60 | LU632_RS13415 | ruvA | Holliday junction branch migration protein RuvA | 0.75 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | — | — |
Shewanella amazonensis SB2B | 0.60 | Sama_1840 | ruvA | Holliday junction DNA helicase RuvA (RefSeq) | 0.76 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
Serratia liquefaciens MT49 | 0.60 | IAI46_14625 | | Holliday junction branch migration protein RuvA | 0.76 | IAI46_24530 | | methylenetetrahydrofolate reductase | — | — |
Pseudomonas putida KT2440 | 0.57 | PP_1216 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.35 | PP_4977 | | 5,10-methylenetetrahydrofolate reductase | low | > 96 |
Pseudomonas stutzeri RCH2 | 0.56 | Psest_1496 | | Holliday junction DNA helicase, RuvA subunit | 0.34 | Psest_0313 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 67 |
Pseudomonas sp. S08-1 | 0.55 | OH686_19130 | | Holliday junction DNA helicase RuvA | 0.35 | OH686_10820 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.55 | Psyr_1409 | | Holliday junction DNA helicase subunit RuvA | 0.33 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.55 | Psyr_1409 | | Holliday junction DNA helicase subunit RuvA | 0.33 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_18020 | | ATP-dependent DNA helicase RuvA | 0.34 | AO356_13605 | | 5,10-methylenetetrahydrofolate reductase | low | > 104 |
Pseudomonas sp. RS175 | 0.55 | PFR28_03413 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.35 | PFR28_04202 | | 5,10-methylenetetrahydrofolate reductase | low | > 88 |
Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_03585 | | ATP-dependent DNA helicase RuvA | 0.34 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | low | > 101 |
Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_638 | | Holliday junction DNA helicase RuvA | 0.35 | Pf1N1B4_2384 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_5536 | | Holliday junction DNA helicase RuvA | 0.35 | Pf6N2E2_4638 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 103 |
Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_1852 | | Holliday junction DNA helicase RuvA | 0.34 | PfGW456L13_1050 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 87 |
Kangiella aquimarina DSM 16071 | 0.53 | B158DRAFT_1125 | | Holliday junction DNA helicase subunit RuvA | 0.57 | B158DRAFT_2461 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) | low | > 40 |
Marinobacter adhaerens HP15 | 0.52 | HP15_2041 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.36 | HP15_2917 | | 5,10-methylenetetrahydrofolate reductase-like protein | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.52 | PFLU_RS24090 | | Holliday junction branch migration protein RuvA | 0.34 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.52 | PFLU_RS24090 | | Holliday junction branch migration protein RuvA | 0.34 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 109 |
Pseudomonas simiae WCS417 | 0.52 | PS417_22450 | | ATP-dependent DNA helicase RuvA | 0.35 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | low | > 88 |
Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS04910 | | Holliday junction branch migration protein RuvA | 0.34 | LRK54_RS12030 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS04690 | | Holliday junction branch migration protein RuvA | 0.34 | LRK55_RS11765 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.46 | ABZR86_RS10840 | | Holliday junction branch migration protein RuvA | 0.34 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 74 |
Rhodanobacter sp. FW510-T8 | 0.45 | OKGIIK_01840 | ruvA | Holliday junction branch migration protein RuvA | 0.33 | OKGIIK_11830 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Lysobacter sp. OAE881 | 0.44 | ABIE51_RS05045 | | Holliday junction branch migration protein RuvA | 0.34 | ABIE51_RS16490 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 62 |
Dechlorosoma suillum PS | 0.43 | Dsui_0485 | | Holliday junction DNA helicase, RuvA subunit | 0.35 | Dsui_0640 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Acinetobacter radioresistens SK82 | 0.42 | MPMX26_02185 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.32 | MPMX26_01002 | | 5,10-methylenetetrahydrofolate reductase | low | > 36 |
Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.1436.1 | | Holliday junction DNA helicase RuvA | 0.35 | Xcc-8004.4336.1 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 74 |
Burkholderia phytofirmans PsJN | 0.41 | BPHYT_RS16615 | | holliday junction ATP-dependent DNA helicase RuvA | 0.35 | BPHYT_RS18705 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Variovorax sp. SCN45 | 0.41 | GFF2073 | | Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) | 0.31 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 127 |
Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS07980 | | Holliday junction branch migration protein RuvA | 0.34 | ABCV34_RS13550 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.71 | 3 |
Variovorax sp. OAS795 | 0.39 | ABID97_RS24920 | | Holliday junction branch migration protein RuvA | 0.31 | ABID97_RS25015 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.52 | 6 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF1666 | | Holliday junction DNA helicase RuvA | 0.31 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
Paraburkholderia graminis OAS925 | 0.38 | ABIE53_003494 | | Holliday junction DNA helicase RuvA | 0.36 | ABIE53_000061 | | methylenetetrahydrofolate reductase (NADPH) | 0.39 | 6 |
Ralstonia solanacearum GMI1000 | 0.38 | RS_RS02490 | | Holliday junction branch migration protein RuvA | 0.35 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS07625 | | Holliday junction branch migration protein RuvA | 0.34 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.40 | 2 |
Ralstonia solanacearum UW163 | 0.38 | UW163_RS01915 | | Holliday junction branch migration protein RuvA | 0.35 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS11670 | | Holliday junction branch migration protein RuvA | 0.35 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.38 | H281DRAFT_04254 | | Holliday junction DNA helicase subunit RuvA | 0.36 | H281DRAFT_05801 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) | — | — |
Ralstonia solanacearum PSI07 | 0.37 | RPSI07_RS21550 | | Holliday junction branch migration protein RuvA | 0.35 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS26795 | | Holliday junction branch migration protein RuvA | 0.37 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Cupriavidus basilensis FW507-4G11 | 0.37 | RR42_RS02705 | | Holliday junction DNA helicase RuvA | 0.35 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | 0.35 | 31 |
Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS02090 | | Holliday junction DNA helicase RuvA | 0.32 | HSERO_RS21425 | | 5,10-methylenetetrahydrofolate reductase | low | > 78 |
Acidovorax sp. GW101-3H11 | 0.37 | Ac3H11_4683 | | Holliday junction DNA helicase RuvA | 0.33 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.31 | CA264_14545 | | Holliday junction branch migration protein RuvA | 0.19 | CA264_16780 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.30 | CA265_RS18995 | | Holliday junction branch migration protein RuvA | 0.20 | CA265_RS23445 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 88 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.30 | Echvi_4082 | | Holliday junction DNA helicase, RuvA subunit | 0.21 | Echvi_3637 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 79 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.27 | ABZR88_RS18310 | | Holliday junction branch migration protein RuvA | 0.20 | ABZR88_RS20935 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Parabacteroides merdae CL09T00C40 | 0.25 | HMPREF1078_RS13015 | | Holliday junction branch migration protein RuvA | 0.20 | HMPREF1078_RS07860 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 61 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.25 | A4249_RS15860 | | Holliday junction branch migration protein RuvA | 0.43 | A4249_RS07925 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Rhodopseudomonas palustris CGA009 | 0.25 | TX73_005655 | | Holliday junction branch migration protein RuvA | 0.45 | TX73_019175 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Bifidobacterium breve UCC2003 | 0.24 | BBR_RS15655 | | Holliday junction branch migration protein RuvA | 0.23 | BBR_RS15410 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 34 |
Rhodospirillum rubrum S1H | 0.24 | Rru_A1088 | | DNA recombination protein RuvA (NCBI) | 0.48 | Rru_A1530 | | 5,10-methylenetetrahydrofolate reductase (NCBI) | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.24 | Ga0059261_0820 | | Holliday junction DNA helicase subunit RuvA | 0.52 | Ga0059261_0992 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | — | — |
Bacteroides stercoris CC31F | 0.23 | HMPREF1181_RS07915 | | Holliday junction branch migration protein RuvA | 0.17 | HMPREF1181_RS00120 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 56 |
Magnetospirillum magneticum AMB-1 | 0.23 | AMB_RS16255 | | Holliday junction branch migration protein RuvA | 0.51 | AMB_RS02230 | | methylenetetrahydrofolate reductase | — | — |
Bosea sp. OAE506 | 0.23 | ABIE41_RS09475 | | Holliday junction branch migration protein RuvA | 0.49 | ABIE41_RS12475 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Bacteroides thetaiotaomicron VPI-5482 | 0.23 | BT1978 | | Holliday junction DNA helicase ruvA (NCBI ptt file) | 0.19 | BT3821 | | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | — | — |
Bacteroides ovatus ATCC 8483 | 0.23 | BACOVA_00691 | | Holliday junction DNA helicase RuvA | 0.16 | BACOVA_03666 | | methylenetetrahydrofolate reductase (NAD(P)H) | — | — |
Fusobacterium nucleatum SB010 | 0.23 | HUW76_06655 | | Holliday junction branch migration protein RuvA | 0.26 | HUW76_02285 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 35 |
Rhizobium sp. OAE497 | 0.22 | ABIE40_RS15745 | | Holliday junction branch migration protein RuvA | 0.40 | ABIE40_RS11950 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 107 |
Sinorhizobium meliloti 1021 | 0.22 | SMc03966 | | Holliday junction DNA helicase RuvA | 0.35 | SMc01843 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Phaeobacter inhibens DSM 17395 | 0.22 | PGA1_c05860 | | holliday junction ATP-dependent DNA helicase RuvA | 0.39 | PGA1_c11700 | | 5,10-methylenetetrahydrofolate reductase MetF | low | > 62 |
Phocaeicola dorei CL03T12C01 | 0.22 | ABI39_RS08200 | | Holliday junction branch migration protein RuvA | 0.20 | ABI39_RS15570 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Agrobacterium fabrum C58 | 0.22 | Atu3723 | | Holliday junction DNA helicase RuvA | 0.36 | Atu2123 | | methylenetetrahydrofolate reductase | — | — |
Dinoroseobacter shibae DFL-12 | 0.21 | Dshi_1104 | | Holliday junction DNA helicase RuvA (RefSeq) | 0.37 | Dshi_2080 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
Phocaeicola vulgatus CL09T03C04 | 0.21 | HMPREF1058_RS00595 | | Holliday junction branch migration protein RuvA | 0.20 | HMPREF1058_RS01490 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 67 |
Desulfovibrio vulgaris Miyazaki F | 0.21 | DvMF_3204 | | Holliday junction DNA helicase RuvA (RefSeq) | 0.26 | DvMF_3034 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | — | — |
Caulobacter crescentus NA1000 | 0.21 | CCNA_03345 | | Holliday junction DNA helicase RuvA | 0.44 | CCNA_02224 | | methylenetetrahydrofolate reductase | 0.38 | 28 |
Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_03345 | | Holliday junction DNA helicase RuvA | 0.44 | CCNA_02224 | | methylenetetrahydrofolate reductase | — | — |
Azospirillum brasilense Sp245 | 0.20 | AZOBR_RS09045 | | Holliday junction DNA helicase RuvA | 0.51 | AZOBR_RS09540 | | 5 10-methylenetetrahydrofolate reductase | — | — |
Azospirillum sp. SherDot2 | 0.19 | MPMX19_00697 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.52 | MPMX19_00635 | | 5,10-methylenetetrahydrofolate reductase | — | — |
Not shown: 2 genomes with orthologs for CSW01_09245 only; 1 genomes with orthologs for CSW01_13560 only