Conservation of cofitness between CSW01_09245 and CSW01_13560 in Vibrio cholerae E7946 ATCC 55056

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09245 Holliday junction branch migration protein RuvA 1.0 CSW01_13560 methylenetetrahydrofolate reductase 0.76 10
Escherichia fergusonii Becca 0.67 EFB2_02081 Holliday junction ATP-dependent DNA helicase RuvA 0.78 EFB2_04672 5,10-methylenetetrahydrofolate reductase
Escherichia coli BW25113 0.67 b1861 ruvA Holliday junction DNA helicase motor protein (NCBI) 0.79 b3941 metF 5,10-methylenetetrahydrofolate reductase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_01867 Holliday junction ATP-dependent DNA helicase RuvA 0.79 OHPLBJKB_04109 5,10-methylenetetrahydrofolate reductase
Escherichia coli Nissle 1917 0.67 ECOLIN_RS10365 Holliday junction branch migration protein RuvA 0.78 ECOLIN_RS22760 methylenetetrahydrofolate reductase
Escherichia coli BL21 0.67 ECD_01832 component of RuvABC resolvasome, regulatory subunit 0.79 ECD_03827 5,10-methylenetetrahydrofolate reductase
Escherichia coli ECRC62 0.67 BNILDI_15515 ruvA Holliday junction branch migration protein RuvA 0.79 BNILDI_05725 metF methylenetetrahydrofolate reductase
Escherichia coli ECOR27 0.66 NOLOHH_16725 ruvA Holliday junction branch migration protein RuvA 0.79 NOLOHH_05810 metF methylenetetrahydrofolate reductase
Escherichia coli ECRC101 0.66 OKFHMN_26280 ruvA Holliday junction branch migration protein RuvA 0.79 OKFHMN_13665 metF methylenetetrahydrofolate reductase
Escherichia coli ECRC101 0.66 MCAODC_19125 ruvA Holliday junction branch migration protein RuvA 0.79 MCAODC_04165 metF methylenetetrahydrofolate reductase
Escherichia coli ECRC98 0.66 JDDGAC_00855 ruvA Holliday junction branch migration protein RuvA 0.79 JDDGAC_17290 metF methylenetetrahydrofolate reductase
Enterobacter sp. TBS_079 0.66 MPMX20_02767 Holliday junction ATP-dependent DNA helicase RuvA 0.79 MPMX20_04529 5,10-methylenetetrahydrofolate reductase low > 85
Rahnella sp. WP5 0.66 EX31_RS11675 Holliday junction branch migration protein RuvA 0.78 EX31_RS14205 methylenetetrahydrofolate reductase low > 89
Escherichia coli ECRC102 0.66 NIAGMN_01780 ruvA Holliday junction branch migration protein RuvA 0.79 NIAGMN_11420 metF methylenetetrahydrofolate reductase
Escherichia coli ECRC99 0.66 KEDOAH_01825 ruvA Holliday junction branch migration protein RuvA 0.79 KEDOAH_14495 metF methylenetetrahydrofolate reductase
Escherichia coli ECOR38 0.66 HEPCGN_04690 ruvA Holliday junction branch migration protein RuvA 0.78 HEPCGN_12310 metF methylenetetrahydrofolate reductase
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0695 Holliday junction DNA helicase subunit RuvA 0.79 EX28DRAFT_4413 5,10-methylenetetrahydrofolate reductase, prokaryotic form
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF1640 Holliday junction DNA helicase RuvA 0.77 GFF2329 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Klebsiella michiganensis M5al 0.65 BWI76_RS18150 Holliday junction branch migration protein RuvA 0.78 BWI76_RS00805 5,10-methylenetetrahydrofolate reductase
Shewanella loihica PV-4 0.64 Shew_2076 Holliday junction DNA helicase RuvA (RefSeq) 0.74 Shew_0522 metF 5,10-methylenetetrahydrofolate reductase (RefSeq)
Alteromonas macleodii MIT1002 0.63 MIT1002_01332 Holliday junction ATP-dependent DNA helicase RuvA 0.66 MIT1002_03670 5,10-methylenetetrahydrofolate reductase
Pantoea sp. MT58 0.63 IAI47_08445 Holliday junction branch migration protein RuvA 0.78 IAI47_00890 methylenetetrahydrofolate reductase low > 76
Shewanella oneidensis MR-1 0.63 SO2430 ruvA Holliday junction DNA helicase RuvA (NCBI ptt file) 0.73 SO4054 metF 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.62 Shewana3_1956 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.73 Shewana3_3612 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) low > 73
Dickeya dadantii 3937 0.61 DDA3937_RS10080 Holliday junction branch migration protein RuvA 0.79 DDA3937_RS00960 methylenetetrahydrofolate reductase
Dickeya dianthicola 67-19 0.61 HGI48_RS10110 Holliday junction branch migration protein RuvA 0.80 HGI48_RS20415 methylenetetrahydrofolate reductase
Dickeya dianthicola ME23 0.61 DZA65_RS10525 Holliday junction branch migration protein RuvA 0.79 DZA65_RS21460 methylenetetrahydrofolate reductase
Pectobacterium carotovorum WPP14 0.61 HER17_RS11845 Holliday junction branch migration protein RuvA 0.76 HER17_RS00950 methylenetetrahydrofolate reductase
Erwinia tracheiphila SCR3 0.60 LU632_RS13415 ruvA Holliday junction branch migration protein RuvA 0.75 LU632_RS19630 metF methylenetetrahydrofolate reductase
Shewanella amazonensis SB2B 0.60 Sama_1840 ruvA Holliday junction DNA helicase RuvA (RefSeq) 0.76 Sama_3169 metF 5,10-methylenetetrahydrofolate reductase (RefSeq)
Serratia liquefaciens MT49 0.60 IAI46_14625 Holliday junction branch migration protein RuvA 0.76 IAI46_24530 methylenetetrahydrofolate reductase
Pseudomonas putida KT2440 0.57 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 0.35 PP_4977 5,10-methylenetetrahydrofolate reductase low > 96
Pseudomonas stutzeri RCH2 0.56 Psest_1496 Holliday junction DNA helicase, RuvA subunit 0.34 Psest_0313 5,10-methylenetetrahydrofolate reductase, prokaryotic form low > 67
Pseudomonas sp. S08-1 0.55 OH686_19130 Holliday junction DNA helicase RuvA 0.35 OH686_10820 methylenetetrahydrofolate reductase [NAD(P)H]
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.33 Psyr_0459 5,10-methylenetetrahydrofolate reductase low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1409 Holliday junction DNA helicase subunit RuvA 0.33 Psyr_0459 5,10-methylenetetrahydrofolate reductase
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_18020 ATP-dependent DNA helicase RuvA 0.34 AO356_13605 5,10-methylenetetrahydrofolate reductase low > 104
Pseudomonas sp. RS175 0.55 PFR28_03413 Holliday junction ATP-dependent DNA helicase RuvA 0.35 PFR28_04202 5,10-methylenetetrahydrofolate reductase low > 88
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_03585 ATP-dependent DNA helicase RuvA 0.34 AO353_08015 5,10-methylenetetrahydrofolate reductase low > 101
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_638 Holliday junction DNA helicase RuvA 0.35 Pf1N1B4_2384 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5536 Holliday junction DNA helicase RuvA 0.35 Pf6N2E2_4638 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) low > 103
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_1852 Holliday junction DNA helicase RuvA 0.34 PfGW456L13_1050 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) low > 87
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_1125 Holliday junction DNA helicase subunit RuvA 0.57 B158DRAFT_2461 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) low > 40
Marinobacter adhaerens HP15 0.52 HP15_2041 Holliday junction ATP-dependent DNA helicase RuvA 0.36 HP15_2917 5,10-methylenetetrahydrofolate reductase-like protein
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.34 PFLU_RS28165 methylenetetrahydrofolate reductase [NAD(P)H] low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS24090 Holliday junction branch migration protein RuvA 0.34 PFLU_RS28165 methylenetetrahydrofolate reductase [NAD(P)H] low > 109
Pseudomonas simiae WCS417 0.52 PS417_22450 ATP-dependent DNA helicase RuvA 0.35 PS417_26510 5,10-methylenetetrahydrofolate reductase low > 88
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS04910 Holliday junction branch migration protein RuvA 0.34 LRK54_RS12030 methylenetetrahydrofolate reductase [NAD(P)H]
Rhodanobacter denitrificans MT42 0.48 LRK55_RS04690 Holliday junction branch migration protein RuvA 0.34 LRK55_RS11765 methylenetetrahydrofolate reductase [NAD(P)H]
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS10840 Holliday junction branch migration protein RuvA 0.34 ABZR86_RS11570 methylenetetrahydrofolate reductase [NAD(P)H] low > 74
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_01840 ruvA Holliday junction branch migration protein RuvA 0.33 OKGIIK_11830 metF methylenetetrahydrofolate reductase [NAD(P)H]
Lysobacter sp. OAE881 0.44 ABIE51_RS05045 Holliday junction branch migration protein RuvA 0.34 ABIE51_RS16490 methylenetetrahydrofolate reductase [NAD(P)H] low > 62
Dechlorosoma suillum PS 0.43 Dsui_0485 Holliday junction DNA helicase, RuvA subunit 0.35 Dsui_0640 5,10-methylenetetrahydrofolate reductase
Acinetobacter radioresistens SK82 0.42 MPMX26_02185 Holliday junction ATP-dependent DNA helicase RuvA 0.32 MPMX26_01002 5,10-methylenetetrahydrofolate reductase low > 36
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1436.1 Holliday junction DNA helicase RuvA 0.35 Xcc-8004.4336.1 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) low > 74
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS16615 holliday junction ATP-dependent DNA helicase RuvA 0.35 BPHYT_RS18705 5,10-methylenetetrahydrofolate reductase
Variovorax sp. SCN45 0.41 GFF2073 Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) 0.31 GFF2055 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) low > 127
Castellaniella sp019104865 MT123 0.41 ABCV34_RS07980 Holliday junction branch migration protein RuvA 0.34 ABCV34_RS13550 methylenetetrahydrofolate reductase [NAD(P)H] 0.71 3
Variovorax sp. OAS795 0.39 ABID97_RS24920 Holliday junction branch migration protein RuvA 0.31 ABID97_RS25015 methylenetetrahydrofolate reductase [NAD(P)H] 0.52 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1666 Holliday junction DNA helicase RuvA 0.31 GFF1692 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Paraburkholderia graminis OAS925 0.38 ABIE53_003494 Holliday junction DNA helicase RuvA 0.36 ABIE53_000061 methylenetetrahydrofolate reductase (NADPH) 0.39 6
Ralstonia solanacearum GMI1000 0.38 RS_RS02490 Holliday junction branch migration protein RuvA 0.35 RS_RS00460 methylenetetrahydrofolate reductase [NAD(P)H]
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS07625 Holliday junction branch migration protein RuvA 0.34 ABZR87_RS04865 methylenetetrahydrofolate reductase [NAD(P)H] 0.40 2
Ralstonia solanacearum UW163 0.38 UW163_RS01915 Holliday junction branch migration protein RuvA 0.35 UW163_RS03705 methylenetetrahydrofolate reductase [NAD(P)H]
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS11670 Holliday junction branch migration protein RuvA 0.35 RALBFv3_RS09875 methylenetetrahydrofolate reductase [NAD(P)H]
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_04254 Holliday junction DNA helicase subunit RuvA 0.36 H281DRAFT_05801 5,10-methylenetetrahydrofolate reductase (NAD(P))
Ralstonia solanacearum PSI07 0.37 RPSI07_RS21550 Holliday junction branch migration protein RuvA 0.35 RPSI07_RS23495 methylenetetrahydrofolate reductase [NAD(P)H]
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS26795 Holliday junction branch migration protein RuvA 0.37 QEN71_RS28715 methylenetetrahydrofolate reductase [NAD(P)H]
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS02705 Holliday junction DNA helicase RuvA 0.35 RR42_RS01385 5,10-methylenetetrahydrofolate reductase 0.35 31
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS02090 Holliday junction DNA helicase RuvA 0.32 HSERO_RS21425 5,10-methylenetetrahydrofolate reductase low > 78
Acidovorax sp. GW101-3H11 0.37 Ac3H11_4683 Holliday junction DNA helicase RuvA 0.33 Ac3H11_3045 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_14545 Holliday junction branch migration protein RuvA 0.19 CA264_16780 methylenetetrahydrofolate reductase [NAD(P)H]
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS18995 Holliday junction branch migration protein RuvA 0.20 CA265_RS23445 methylenetetrahydrofolate reductase [NAD(P)H] low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_4082 Holliday junction DNA helicase, RuvA subunit 0.21 Echvi_3637 5,10-methylenetetrahydrofolate reductase, prokaryotic form low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS18310 Holliday junction branch migration protein RuvA 0.20 ABZR88_RS20935 methylenetetrahydrofolate reductase [NAD(P)H]
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS13015 Holliday junction branch migration protein RuvA 0.20 HMPREF1078_RS07860 methylenetetrahydrofolate reductase [NAD(P)H] low > 61
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS15860 Holliday junction branch migration protein RuvA 0.43 A4249_RS07925 methylenetetrahydrofolate reductase [NAD(P)H]
Rhodopseudomonas palustris CGA009 0.25 TX73_005655 Holliday junction branch migration protein RuvA 0.45 TX73_019175 methylenetetrahydrofolate reductase [NAD(P)H]
Bifidobacterium breve UCC2003 0.24 BBR_RS15655 Holliday junction branch migration protein RuvA 0.23 BBR_RS15410 methylenetetrahydrofolate reductase [NAD(P)H] low > 34
Rhodospirillum rubrum S1H 0.24 Rru_A1088 DNA recombination protein RuvA (NCBI) 0.48 Rru_A1530 5,10-methylenetetrahydrofolate reductase (NCBI)
Sphingomonas koreensis DSMZ 15582 0.24 Ga0059261_0820 Holliday junction DNA helicase subunit RuvA 0.52 Ga0059261_0992 5,10-methylenetetrahydrofolate reductase, prokaryotic form
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS07915 Holliday junction branch migration protein RuvA 0.17 HMPREF1181_RS00120 methylenetetrahydrofolate reductase [NAD(P)H] low > 56
Magnetospirillum magneticum AMB-1 0.23 AMB_RS16255 Holliday junction branch migration protein RuvA 0.51 AMB_RS02230 methylenetetrahydrofolate reductase
Bosea sp. OAE506 0.23 ABIE41_RS09475 Holliday junction branch migration protein RuvA 0.49 ABIE41_RS12475 methylenetetrahydrofolate reductase [NAD(P)H]
Bacteroides thetaiotaomicron VPI-5482 0.23 BT1978 Holliday junction DNA helicase ruvA (NCBI ptt file) 0.19 BT3821 5,10-methylenetetrahydrofolate reductase (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.23 BACOVA_00691 Holliday junction DNA helicase RuvA 0.16 BACOVA_03666 methylenetetrahydrofolate reductase (NAD(P)H)
Fusobacterium nucleatum SB010 0.23 HUW76_06655 Holliday junction branch migration protein RuvA 0.26 HUW76_02285 methylenetetrahydrofolate reductase [NAD(P)H] low > 35
Rhizobium sp. OAE497 0.22 ABIE40_RS15745 Holliday junction branch migration protein RuvA 0.40 ABIE40_RS11950 methylenetetrahydrofolate reductase [NAD(P)H] low > 107
Sinorhizobium meliloti 1021 0.22 SMc03966 Holliday junction DNA helicase RuvA 0.35 SMc01843 5,10-methylenetetrahydrofolate reductase
Phaeobacter inhibens DSM 17395 0.22 PGA1_c05860 holliday junction ATP-dependent DNA helicase RuvA 0.39 PGA1_c11700 5,10-methylenetetrahydrofolate reductase MetF low > 62
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS08200 Holliday junction branch migration protein RuvA 0.20 ABI39_RS15570 methylenetetrahydrofolate reductase [NAD(P)H]
Agrobacterium fabrum C58 0.22 Atu3723 Holliday junction DNA helicase RuvA 0.36 Atu2123 methylenetetrahydrofolate reductase
Dinoroseobacter shibae DFL-12 0.21 Dshi_1104 Holliday junction DNA helicase RuvA (RefSeq) 0.37 Dshi_2080 5,10-methylenetetrahydrofolate reductase (RefSeq)
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS00595 Holliday junction branch migration protein RuvA 0.20 HMPREF1058_RS01490 methylenetetrahydrofolate reductase [NAD(P)H] low > 67
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_3204 Holliday junction DNA helicase RuvA (RefSeq) 0.26 DvMF_3034 5,10-methylenetetrahydrofolate reductase (RefSeq)
Caulobacter crescentus NA1000 0.21 CCNA_03345 Holliday junction DNA helicase RuvA 0.44 CCNA_02224 methylenetetrahydrofolate reductase 0.38 28
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_03345 Holliday junction DNA helicase RuvA 0.44 CCNA_02224 methylenetetrahydrofolate reductase
Azospirillum brasilense Sp245 0.20 AZOBR_RS09045 Holliday junction DNA helicase RuvA 0.51 AZOBR_RS09540 5 10-methylenetetrahydrofolate reductase
Azospirillum sp. SherDot2 0.19 MPMX19_00697 Holliday junction ATP-dependent DNA helicase RuvA 0.52 MPMX19_00635 5,10-methylenetetrahydrofolate reductase

Not shown: 2 genomes with orthologs for CSW01_09245 only; 1 genomes with orthologs for CSW01_13560 only