Conservation of cofitness between CSW01_13680 and CSW01_00260 in Vibrio cholerae E7946 ATCC 55056

107 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13680 DNA helicase RecG 1.0 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 19
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS18845 ATP-dependent DNA helicase RecG 0.27 PagCFBP13505_RS10855 5-(carboxyamino)imidazole ribonucleotide synthase
Pantoea sp. MT58 0.70 IAI47_00500 ATP-dependent DNA helicase RecG 0.28 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase low > 76
Serratia liquefaciens MT49 0.69 IAI46_24905 ATP-dependent DNA helicase RecG 0.29 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.44 69
Klebsiella pneumoniae MKP103 0.69 KDGMDA_08135 ATP-dependent DNA helicase RecG 0.29 KDGMDA_15000 5-(carboxyamino)imidazole ribonucleotide synthase low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.29 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) low > 78
Erwinia amylovora T8 0.69 OLJFJH_05550 ATP-dependent DNA helicase RecG 0.28 OLJFJH_17635 5-(carboxyamino)imidazole ribonucleotide synthase low > 58
Escherichia coli ECRC98 0.69 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 0.27 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 87
Escherichia coli ECRC102 0.69 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 0.27 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 80
Dickeya dadantii 3937 0.69 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.28 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase low > 74
Escherichia coli ECRC100 0.69 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 0.27 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 79
Escherichia coli ECRC101 0.69 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.27 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 88
Escherichia coli ECRC99 0.69 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 0.27 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Escherichia coli ECOR27 0.68 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 0.28 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 76
Escherichia coli ECOR38 0.68 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.27 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 0.27 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase low > 74
Escherichia fergusonii Becca 0.68 EFB2_00136 ATP-dependent DNA helicase RecG 0.28 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase low > 86
Escherichia coli ECRC62 0.68 BNILDI_04090 recG ATP-dependent DNA helicase RecG 0.27 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Escherichia coli BW25113 0.68 b3652 recG ATP-dependent DNA helicase (NCBI) 0.27 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) low > 76
Escherichia coli Nissle 1917 0.68 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.28 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase low > 55
Escherichia coli BL21 0.68 ECD_03509 ATP-dependent DNA helicase 0.27 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase low > 61
Klebsiella michiganensis M5al 0.68 BWI76_RS27440 DNA helicase RecG 0.29 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase low > 92
Enterobacter sp. TBS_079 0.68 MPMX20_00084 ATP-dependent DNA helicase RecG 0.27 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase low > 85
Pectobacterium carotovorum WPP14 0.68 HER17_RS21395 ATP-dependent DNA helicase RecG 0.30 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.29 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.29 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.28 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_08345 recG ATP-dependent DNA helicase RecG 0.29 IJEDHG_01025 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Erwinia tracheiphila SCR3 0.67 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.28 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 74
Rahnella sp. WP5 0.67 EX31_RS15820 ATP-dependent DNA helicase RecG 0.29 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.60 63
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.29 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) low > 62
Shewanella loihica PV-4 0.65 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.29 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) low > 60
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.29 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.64 MIT1002_00111 ATP-dependent DNA helicase RecG 0.46 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.57 37
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.28 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) low > 76
Pseudomonas segetis P6 0.57 MPMX49_00040 ATP-dependent DNA helicase RecG 0.36 MPMX49_00154 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas stutzeri RCH2 0.57 Psest_4192 ATP-dependent DNA helicase RecG 0.37 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein
Pseudomonas sp. BP01 0.56 JOY50_RS08945 recG ATP-dependent DNA helicase RecG 0.37 JOY50_RS08825 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas sp. S08-1 0.56 OH686_13505 ATP-dependent DNA helicase RecG 0.37 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas putida KT2440 0.56 PP_5310 junction-specific ATP-dependent DNA helicase 0.36 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas aeruginosa PA14 0.55 IKLFDK_26730 ATP-dependent DNA helicase RecG 0.34 IKLFDK_26300 5-(carboxyamino)imidazole ribonucleotide synthase low > 100
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.35 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.36 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas sp. RS175 0.55 PFR28_04435 ATP-dependent DNA helicase RecG 0.37 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase
Marinobacter adhaerens HP15 0.55 HP15_309 DNA helicase, ATP-dependent, RecG 0.33 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit
Pseudomonas simiae WCS417 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.36 PS417_28115 phosphoribosylaminoimidazole carboxylase
Pseudomonas fluorescens SBW25 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.37 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Pseudomonas sp. DMC3 0.55 GFF427 ATP-dependent DNA helicase RecG 0.36 GFF485 N5-carboxyaminoimidazole ribonucleotide synthase low > 89
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_00042 ATP-dependent DNA helicase RecG 0.36 GEMAOFIL_00089 N5-carboxyaminoimidazole ribonucleotide synthase
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_12380 ATP-dependent DNA helicase RecG 0.36 AO356_11075 phosphoribosylaminoimidazole carboxylase
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.35 AO353_09935 phosphoribosylaminoimidazole carboxylase
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase
Pseudomonas sp. SVBP6 0.55 COO64_RS01595 recG ATP-dependent DNA helicase RecG 0.36 COO64_RS01745 5-(carboxyamino)imidazole ribonucleotide synthase low > 93
Lysobacter sp. OAE881 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.32 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Acinetobacter radioresistens SK82 0.52 MPMX26_02732 ATP-dependent DNA helicase RecG 0.39 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase low > 36
Acinetobacter baumannii LAC-4 0.52 RR41_RS02075 ATP-dependent DNA helicase RecG 0.39 RR41_RS18910 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS16735 ATP-dependent DNA helicase RecG 0.29 LRK53_RS14785 5-(carboxyamino)imidazole ribonucleotide synthase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.32 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.31 63
Rhodanobacter denitrificans MT42 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.30 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase low > 63
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.30 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.30 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.32 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.31 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS17390 ATP-dependent DNA helicase RecG 0.20 RR42_RS03230 phosphoribosylaminoimidazole carboxylase
Methylophilus sp. DMC18 0.45 GFF2125 ATP-dependent DNA helicase RecG 0.24 GFF1769 N5-carboxyaminoimidazole ribonucleotide synthase
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS05675 DNA helicase RecG 0.20 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum UW163 0.45 UW163_RS07950 DNA helicase RecG 0.20 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum PSI07 0.45 RPSI07_RS11625 DNA helicase RecG 0.20 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.20 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase
Ralstonia solanacearum GMI1000 0.45 RS_RS13565 DNA helicase RecG 0.20 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase
Paraburkholderia graminis OAS925 0.44 ABIE53_000833 ATP-dependent DNA helicase RecG 0.23 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.23 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase low > 109
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.23 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.24 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.22 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase
Acidovorax sp. GW101-3H11 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.22 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Dechlorosoma suillum PS 0.42 Dsui_0311 ATP-dependent DNA helicase RecG 0.23 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein
Castellaniella sp019104865 MT123 0.41 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.23 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase
Variovorax sp. OAS795 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.23 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.25 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Variovorax sp. SCN45 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.24 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.80 64
Sinorhizobium meliloti 1021 0.35 SMc00228 ATP-dependent DNA helicase RecG 0.27 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit low > 103
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG 0.22 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit
Rhizobium sp. OAE497 0.34 ABIE40_RS09300 ATP-dependent DNA helicase RecG 0.26 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase low > 107
Azospirillum sp. SherDot2 0.34 MPMX19_00951 ATP-dependent DNA helicase RecG 0.28 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase
Magnetospirillum magneticum AMB-1 0.34 AMB_RS12400 ATP-dependent DNA helicase RecG 0.24 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase
Azospirillum brasilense Sp245 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.28 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase
Sphingobium sp. HT1-2 0.33 GFF3604 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.28 GFF1298 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18)
Agrobacterium fabrum C58 0.33 Atu1780 ATP-dependent DNA helicase 0.26 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit low > 89
Caulobacter crescentus NA1000 0.33 CCNA_01504 ATP-dependent DNA helicase recG 0.28 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit low > 66
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01504 ATP-dependent DNA helicase recG 0.28 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit low > 67
Phaeobacter inhibens DSM 17395 0.32 PGA1_c14380 ATP-dependent DNA helicase RecG 0.25 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK low > 62
Cellulophaga baltica 18 0.32 M666_RS15340 ATP-dependent DNA helicase RecG 0.19 M666_RS01265 5-(carboxyamino)imidazole ribonucleotide synthase low > 67
Dinoroseobacter shibae DFL-12 0.32 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) 0.26 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) low > 64
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_1162 ATP-dependent DNA helicase RecG 0.22 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.27 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase
Bosea sp. OAE506 0.31 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.26 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase low > 77
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_15020 DNA helicase RecG 0.21 CA264_12600 5-(carboxyamino)imidazole ribonucleotide synthase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS22835 ATP-dependent DNA helicase RecG 0.22 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS04765 ATP-dependent DNA helicase RecG 0.25 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase
Rhodospirillum rubrum S1H 0.29 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) 0.23 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI)
Xanthobacter sp. DMC5 0.29 GFF630 ATP-dependent DNA helicase RecG 0.26 GFF3228 N5-carboxyaminoimidazole ribonucleotide synthase
Rhodopseudomonas palustris CGA009 0.29 TX73_013795 ATP-dependent DNA helicase RecG 0.26 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS17240 ATP-dependent DNA helicase RecG 0.19 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase
Mycobacterium tuberculosis H37Rv 0.24 Rv2973c Probable ATP-dependent DNA helicase RecG 0.23 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC)

Not shown: 6 genomes with orthologs for CSW01_13680 only; 2 genomes with orthologs for CSW01_00260 only