Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Klebsiella michiganensis M5al | 1.0 | BWI76_RS02510 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 1.0 | BWI76_RS22660 | | 5'/3'-nucleotidase SurE | 0.24 | 19 |
Enterobacter asburiae PDN3 | 0.80 | EX28DRAFT_3364 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.93 | EX28DRAFT_2840 | | 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) | low | > 76 |
Escherichia coli Nissle 1917 | 0.79 | ECOLIN_RS24205 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.92 | ECOLIN_RS15345 | | 5'/3'-nucleotidase SurE | low | > 55 |
Enterobacter sp. TBS_079 | 0.79 | MPMX20_00448 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.93 | MPMX20_03630 | | 5'/3'-nucleotidase SurE | low | > 85 |
Escherichia coli BW25113 | 0.79 | b4167 | yjeF | predicted carbohydrate kinase (NCBI) | 0.92 | b2744 | surE | acid phosphatase (NCBI) | low | > 76 |
Escherichia coli BL21 | 0.79 | ECD_04034 | | bifunctional NAD(P)H-hydrate repair enzyme; C-terminal domain ADP-dependent (S)-NAD(P)H-hydrate dehydratase and N-terminal domain NAD(P)H-hydrate epimerase | 0.92 | ECD_02594 | | broad specificity 5'(3')-nucleotidase and polyphosphatase | low | > 61 |
Escherichia coli ECRC101 | 0.78 | MCAODC_02795 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.92 | MCAODC_11005 | surE | 5'/3'-nucleotidase SurE | low | > 87 |
Escherichia coli ECRC102 | 0.78 | NIAGMN_10130 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.92 | NIAGMN_18250 | surE | 5'/3'-nucleotidase SurE | — | — |
Escherichia coli ECRC98 | 0.78 | JDDGAC_15920 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.92 | JDDGAC_24145 | surE | 5'/3'-nucleotidase SurE | low | > 86 |
Escherichia coli ECRC99 | 0.78 | KEDOAH_15875 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.92 | KEDOAH_07660 | surE | 5'/3'-nucleotidase SurE | — | — |
Escherichia coli ECRC100 | 0.78 | OKFHMN_12280 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.92 | OKFHMN_20480 | surE | 5'/3'-nucleotidase SurE | low | > 80 |
Escherichia fergusonii Becca | 0.78 | EFB2_04368 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.92 | EFB2_01166 | | 5'/3'-nucleotidase SurE | low | > 86 |
Escherichia coli ECRC62 | 0.78 | BNILDI_06945 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.92 | BNILDI_10845 | surE | 5'/3'-nucleotidase SurE | low | > 75 |
Escherichia coli ECOR27 | 0.78 | NOLOHH_04545 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.92 | NOLOHH_12295 | surE | 5'/3'-nucleotidase SurE | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.78 | OHPLBJKB_03875 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.92 | OHPLBJKB_00989 | | '5'/3'-nucleotidase SurE' transl_table=11 | low | > 73 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.78 | GFF820 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.93 | GFF4792 | | 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) | low | > 78 |
Escherichia coli ECOR38 | 0.78 | HEPCGN_10510 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.91 | HEPCGN_19660 | surE | 5'/3'-nucleotidase SurE | low | > 87 |
Erwinia tracheiphila SCR3 | 0.67 | LU632_RS02030 | nnr | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.87 | LU632_RS06465 | surE | 5'/3'-nucleotidase SurE | low | > 74 |
Rahnella sp. WP5 | 0.65 | EX31_RS08845 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.79 | EX31_RS07840 | | 5'/3'-nucleotidase SurE | low | > 89 |
Pantoea sp. MT58 | 0.64 | IAI47_02565 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.87 | IAI47_04220 | | 5'/3'-nucleotidase SurE | low | > 76 |
Serratia liquefaciens MT49 | 0.63 | IAI46_01600 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.82 | IAI46_03775 | | 5'/3'-nucleotidase SurE | low | > 86 |
Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_14940 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.54 | CSW01_02820 | | 5'-nucleotidase SurE | low | > 62 |
Shewanella amazonensis SB2B | 0.36 | Sama_3030 | | YjeF protein (RefSeq) | 0.55 | Sama_1041 | surE | stationary phase survival protein SurE (RefSeq) | low | > 62 |
Shewanella sp. ANA-3 | 0.36 | Shewana3_0592 | | carbohydrate kinase, YjeF related protein (RefSeq) | 0.56 | Shewana3_1121 | surE | stationary phase survival protein SurE (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.36 | SO0598 | yjeF | yjeF protein (NCBI ptt file) | 0.55 | SO3435 | surE | stationary-phase survival protein SurE (NCBI ptt file) | low | > 76 |
Rhodanobacter denitrificans FW104-10B01 | 0.34 | LRK54_RS15135 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.52 | LRK54_RS16650 | | 5'/3'-nucleotidase SurE | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.34 | LRK55_RS14850 | | NAD(P)H-hydrate dehydratase | 0.52 | LRK55_RS16375 | | 5'/3'-nucleotidase SurE | low | > 63 |
Shewanella loihica PV-4 | 0.34 | Shew_0561 | | carbohydrate kinase, YjeF-related protein (RefSeq) | 0.53 | Shew_1210 | | stationary-phase survival protein SurE (RefSeq) | low | > 60 |
Lysobacter sp. OAE881 | 0.34 | ABIE51_RS08050 | | NAD(P)H-hydrate dehydratase | 0.50 | ABIE51_RS06485 | | 5'/3'-nucleotidase SurE | low | > 62 |
Dyella japonica UNC79MFTsu3.2 | 0.33 | ABZR86_RS00840 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.52 | ABZR86_RS06595 | | 5'/3'-nucleotidase SurE | low | > 74 |
Marinobacter adhaerens HP15 | 0.31 | HP15_2504 | | carbohydrate kinase, YjeF related protein | 0.46 | HP15_1279 | | stationary-phase survival protein SurE | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.31 | Xcc-8004.2253.1 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.51 | Xcc-8004.3131.1 | | hypothetical protein | low | > 74 |
Pseudomonas stutzeri RCH2 | 0.31 | Psest_0678 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.44 | Psest_2810 | | 5'/3'-nucleotidase SurE | 0.30 | 5 |
Pseudomonas fluorescens FW300-N1B4 | 0.31 | Pf1N1B4_1417 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.44 | Pf1N1B4_3112 | | 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) | low | > 87 |
Rhodanobacter sp. FW510-T8 | 0.31 | OKGIIK_03905 | | Bifunctional NAD(P)H-hydrate repair enzyme | 0.52 | OKGIIK_08115 | surE | 5'/3'-nucleotidase SurE | low | > 52 |
Pseudomonas sp. RS175 | 0.30 | PFR28_05116 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.41 | PFR28_00424 | | '5'-nucleotidase SurE' transl_table=11 | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.30 | Pf6N2E2_3619 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.41 | Pf6N2E2_3040 | | 5-nucleotidase SurE (EC 3.1.3.5) | 0.25 | 84 |
Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_159 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.43 | PfGW456L13_4678 | | 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) | low | > 87 |
Pseudomonas fluorescens FW300-N2C3 | 0.30 | AO356_08680 | | carbohydrate kinase | 0.40 | AO356_05900 | | stationary phase survival protein SurE | low | > 104 |
Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_13120 | | carbohydrate kinase | 0.44 | AO353_16600 | | stationary phase survival protein SurE | low | > 101 |
Pseudomonas sp. S08-1 | 0.28 | OH686_09495 | | NAD(P)H-hydrate epimerase / ADP-dependent (S)-NAD(P)H-hydrate dehydratase | 0.46 | OH686_18170 | | 5'/3'-nucleotidase SurE | 0.47 | 37 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.28 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | 0.43 | Psyr_1371 | | 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.28 | Psyr_0567 | | Protein of unknown function UPF0031:YjeF-related protein, N-terminal | 0.43 | Psyr_1371 | | 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase | low | > 86 |
Kangiella aquimarina DSM 16071 | 0.27 | B158DRAFT_1947 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.53 | B158DRAFT_2296 | | 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) | low | > 40 |
Burkholderia phytofirmans PsJN | 0.26 | BPHYT_RS09505 | | carbohydrate kinase | 0.42 | BPHYT_RS09100 | | stationary phase survival protein SurE | low | > 109 |
Ralstonia sp. UNC404CL21Col | 0.24 | ABZR87_RS12740 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.42 | ABZR87_RS10860 | | 5'/3'-nucleotidase SurE | — | — |
Ralstonia solanacearum UW163 | 0.24 | UW163_RS14605 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.41 | UW163_RS12685 | | 5'/3'-nucleotidase SurE | — | — |
Ralstonia solanacearum IBSBF1503 | 0.24 | RALBFv3_RS01295 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.41 | RALBFv3_RS15220 | | 5'/3'-nucleotidase SurE | low | > 76 |
Paraburkholderia graminis OAS925 | 0.24 | ABIE53_002139 | | hydroxyethylthiazole kinase-like uncharacterized protein yjeF | 0.43 | ABIE53_002054 | | 5'-nucleotidase | low | > 113 |
Herbaspirillum seropedicae SmR1 | 0.23 | HSERO_RS11180 | | sugar kinase | 0.42 | HSERO_RS14845 | | stationary phase survival protein SurE | low | > 78 |
Ralstonia solanacearum GMI1000 | 0.23 | RS_RS08700 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.42 | RS_RS06030 | | 5'-nucleotidase SurE | low | > 80 |
Paraburkholderia bryophila 376MFSha3.1 | 0.23 | H281DRAFT_00907 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.42 | H281DRAFT_00840 | | 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | low | > 103 |
Ralstonia solanacearum PSI07 | 0.23 | RPSI07_RS16180 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.42 | RPSI07_RS18155 | | 5'/3'-nucleotidase SurE | low | > 81 |
Paraburkholderia sabiae LMG 24235 | 0.22 | QEN71_RS21930 | | NAD(P)H-hydrate dehydratase | 0.43 | QEN71_RS22255 | | 5'/3'-nucleotidase SurE | low | > 153 |
Parabacteroides merdae CL09T00C40 | 0.21 | HMPREF1078_RS15325 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.26 | HMPREF1078_RS04545 | | 5'/3'-nucleotidase SurE | low | > 61 |
Acinetobacter radioresistens SK82 | 0.21 | MPMX26_01782 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.37 | MPMX26_01054 | | 5'-nucleotidase SurE | — | — |
Cupriavidus basilensis FW507-4G11 | 0.21 | RR42_RS09070 | | carbohydrate kinase | 0.42 | RR42_RS13200 | | stationary phase survival protein SurE | 0.40 | 78 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.20 | CA264_16280 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.29 | CA264_12185 | | 5'/3'-nucleotidase SurE | low | > 74 |
Castellaniella sp019104865 MT123 | 0.20 | ABCV34_RS02980 | | NAD(P)H-hydrate dehydratase | 0.44 | ABCV34_RS03030 | | 5'/3'-nucleotidase SurE | low | > 48 |
Bacteroides thetaiotaomicron VPI-5482 | 0.20 | BT4383 | | putative sugar kinase (NCBI ptt file) | 0.23 | BT4003 | | stationary-phase survival protein SurE (NCBI ptt file) | low | > 81 |
Dechlorosoma suillum PS | 0.20 | Dsui_2898 | | yjeF-like protein, hydroxyethylthiazole kinase-related protein | 0.43 | Dsui_1968 | | 5''/3''-nucleotidase SurE | — | — |
Bacteroides stercoris CC31F | 0.20 | HMPREF1181_RS06260 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.23 | HMPREF1181_RS09175 | | 5'/3'-nucleotidase SurE | 0.49 | 39 |
Rhizobium sp. OAE497 | 0.20 | ABIE40_RS09345 | | NAD(P)H-hydrate dehydratase | 0.30 | ABIE40_RS08480 | | 5'/3'-nucleotidase SurE | low | > 107 |
Bacteroides ovatus ATCC 8483 | 0.19 | BACOVA_05215 | | YjeF domain protein | 0.22 | BACOVA_04822 | | 5'/3'-nucleotidase SurE | low | > 94 |
Bosea sp. OAE506 | 0.19 | ABIE41_RS16885 | | NAD(P)H-hydrate dehydratase | 0.31 | ABIE41_RS15015 | | 5'/3'-nucleotidase SurE | low | > 77 |
Acidovorax sp. GW101-3H11 | 0.18 | Ac3H11_415 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.40 | Ac3H11_1784 | | 5-nucleotidase SurE (EC 3.1.3.5) | low | > 79 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.18 | CA265_RS24885 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.29 | CA265_RS16310 | | 5'/3'-nucleotidase SurE | low | > 88 |
Phocaeicola vulgatus CL09T03C04 | 0.18 | HMPREF1058_RS00705 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.26 | HMPREF1058_RS14085 | | 5'/3'-nucleotidase SurE | low | > 67 |
Azospirillum sp. SherDot2 | 0.18 | MPMX19_01552 | | Bifunctional NAD(P)H-hydrate repair enzyme Nnr | 0.33 | MPMX19_01169 | | 5'-nucleotidase SurE | low | > 112 |
Phocaeicola dorei CL03T12C01 | 0.18 | ABI39_RS08310 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.26 | ABI39_RS09735 | | 5'/3'-nucleotidase SurE | low | > 72 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.18 | Echvi_0073 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.27 | Echvi_3388 | | 5'/3'-nucleotidase SurE | low | > 79 |
Azospirillum brasilense Sp245 | 0.18 | AZOBR_RS07115 | | hypothetical protein | 0.36 | AZOBR_RS15460 | | 5'-nucleotidase | low | > 97 |
Variovorax sp. SCN45 | 0.17 | GFF397 | | NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) | 0.43 | GFF2845 | | 5'-nucleotidase SurE (EC 3.1.3.5) | low | > 127 |
Variovorax sp. OAS795 | 0.17 | ABID97_RS17190 | | NAD(P)H-hydrate dehydratase | 0.43 | ABID97_RS10715 | | 5'/3'-nucleotidase SurE | low | > 91 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.17 | ABZR88_RS18865 | | NAD(P)H-hydrate dehydratase | 0.30 | ABZR88_RS03555 | | 5'/3'-nucleotidase SurE | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.16 | GFF4918 | | NAD(P)HX epimerase / NAD(P)HX dehydratase | 0.43 | GFF3879 | | 5-nucleotidase SurE (EC 3.1.3.5) | low | > 90 |
Sinorhizobium meliloti 1021 | 0.15 | SMc00946 | | hypothetical protein | 0.31 | SMc02063 | | stationary phase survival protein SurE | — | — |
Rhodopseudomonas palustris CGA009 | 0.15 | TX73_015380 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.31 | TX73_014710 | | 5'/3'-nucleotidase SurE | low | > 86 |
Agrobacterium fabrum C58 | 0.15 | Atu1768 | | hypothetical protein | 0.30 | Atu1702 | | stationary-phase survival protein | low | > 89 |
Dinoroseobacter shibae DFL-12 | 0.14 | Dshi_1837 | | carbohydrate kinase, YjeF related protein (RefSeq) | 0.23 | Dshi_2136 | | stationary-phase survival protein SurE (RefSeq) | low | > 64 |
Caulobacter crescentus NA1000 | 0.14 | CCNA_02043 | | sugar kinase | 0.34 | CCNA_02077 | | 5'(3')-nucleotidase/polyphosphatase SurE | low | > 66 |
Caulobacter crescentus NA1000 Δfur | 0.14 | CCNA_02043 | | sugar kinase | 0.34 | CCNA_02077 | | 5'(3')-nucleotidase/polyphosphatase SurE | low | > 67 |
Sphingomonas koreensis DSMZ 15582 | 0.14 | Ga0059261_0649 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.28 | Ga0059261_0278 | | 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) | low | > 68 |
Phaeobacter inhibens DSM 17395 | 0.13 | PGA1_c18700 | | yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region | 0.24 | PGA1_c10770 | | 5'-nucleotidase SurE | low | > 62 |
Magnetospirillum magneticum AMB-1 | 0.13 | AMB_RS14075 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.34 | AMB_RS12675 | | 5'-nucleotidase SurE | — | — |
Methanococcus maripaludis S2 | 0.12 | MMP_RS01375 | | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | 0.25 | MMP_RS05435 | | 5'/3'-nucleotidase SurE | low | > 25 |
Methanococcus maripaludis JJ | 0.12 | MMJJ_RS04000 | | NAD(P)H-hydrate dehydratase | 0.25 | MMJJ_RS08930 | | 5'/3'-nucleotidase SurE | low | > 28 |
Rhodospirillum rubrum S1H | 0.11 | Rru_A1547 | | hypothetical protein (NCBI) | 0.33 | Rru_A1769 | | Acid phosphatase (NCBI) | — | — |
Synechococcus elongatus PCC 7942 | 0.10 | Synpcc7942_1273 | | hypothetical protein | 0.33 | Synpcc7942_2063 | surE | stationary phase survival protein SurE | low | > 38 |
Not shown: 6 genomes with orthologs for BWI76_RS02510 only; 7 genomes with orthologs for BWI76_RS22660 only