Conservation of cofitness between BPHYT_RS02610 and BPHYT_RS33900 in Burkholderia phytofirmans PsJN

96 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 1.0 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.80 2
Paraburkholderia bryophila 376MFSha3.1 0.95 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.98 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.46 26
Paraburkholderia graminis OAS925 0.92 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.98 ABIE53_004804 3-isopropylmalate dehydrogenase 0.45 26
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.96 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.60 98
Ralstonia solanacearum GMI1000 0.62 RS_RS01760 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.89 RS_RS09990 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS10920 glycerol-3-phosphate dehydrogenase 0.89 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.61 31
Ralstonia solanacearum UW163 0.60 UW163_RS02660 glycerol-3-phosphate dehydrogenase 0.89 UW163_RS11115 3-isopropylmalate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS06770 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.89 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.71 12
Ralstonia solanacearum PSI07 0.58 RPSI07_RS22390 glycerol-3-phosphate dehydrogenase 0.89 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.65 57
Castellaniella sp019104865 MT123 0.56 ABCV34_RS14250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.75 ABCV34_RS04280 3-isopropylmalate dehydrogenase low > 48
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS00795 glycerol-3-phosphate dehydrogenase 0.86 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.81 1
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.89 RR42_RS14385 3-isopropylmalate dehydrogenase 0.81 11
Variovorax sp. SCN45 0.50 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.79 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 127
Variovorax sp. OAS795 0.49 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.79 ABID97_RS08455 3-isopropylmalate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.77 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 90
Acidovorax sp. GW101-3H11 0.46 Ac3H11_3860 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.79 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.78 19
Dechlorosoma suillum PS 0.43 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.68 Dsui_3198 3-isopropylmalate dehydrogenase — —
Lysobacter sp. OAE881 0.42 ABIE51_RS00495 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase — —
Desulfovibrio vulgaris Hildenborough JW710 0.42 DVU3159 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (TIGR) 0.54 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.30 52
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.271.1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.60 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.66 13
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.63 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_13015 gpsA glycerol-3-phosphate dehydrogenase 0.42 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase — —
Shewanella loihica PV-4 0.39 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.48 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS13250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.40 ABZR86_RS15950 3-isopropylmalate dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS10860 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase — —
Shewanella sp. ANA-3 0.38 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.48 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) — —
Rhodanobacter denitrificans MT42 0.38 LRK55_RS10550 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.41 LRK55_RS09965 3-isopropylmalate dehydrogenase — —
Shewanella amazonensis SB2B 0.38 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.47 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.38 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.48 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.38 MIT1002_00485 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.51 MIT1002_00948 3-isopropylmalate dehydrogenase low > 70
Rhodospirillum rubrum S1H 0.37 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.51 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) low > 58
Azospirillum sp. SherDot2 0.37 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.51 MPMX19_00607 3-isopropylmalate dehydrogenase 0.73 12
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.60 Ga0059261_3190 3-isopropylmalate dehydrogenase low > 68
Pectobacterium carotovorum WPP14 0.36 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 HER17_RS03080 3-isopropylmalate dehydrogenase low > 75
Azospirillum brasilense Sp245 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.49 AZOBR_RS14130 3-isopropylmalate dehydrogenase 0.70 25
Serratia liquefaciens MT49 0.36 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 IAI46_03350 3-isopropylmalate dehydrogenase low > 86
Rahnella sp. WP5 0.36 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 EX31_RS03685 3-isopropylmalate dehydrogenase 0.76 5
Escherichia coli Nissle 1917 0.36 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 ECOLIN_RS00395 3-isopropylmalate dehydrogenase — —
Escherichia fergusonii Becca 0.36 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.49 EFB2_03972 3-isopropylmalate dehydrogenase — —
Dickeya dadantii 3937 0.36 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 DDA3937_RS18120 3-isopropylmalate dehydrogenase — —
Escherichia coli ECOR27 0.36 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 NOLOHH_03065 leuA 2-isopropylmalate synthase — —
Escherichia coli BW25113 0.36 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) 0.49 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) — —
Escherichia coli ECRC101 0.36 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.49 OHPLBJKB_03584 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC100 0.36 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECOR38 0.36 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase — —
Enterobacter sp. TBS_079 0.36 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.49 MPMX20_00768 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC102 0.36 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli BL21 0.36 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) 0.49 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent — —
Escherichia coli ECRC98 0.36 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC99 0.36 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC62 0.36 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 BNILDI_08545 leuA 2-isopropylmalate synthase — —
Enterobacter asburiae PDN3 0.36 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase 0.49 EX28DRAFT_3669 3-isopropylmalate dehydrogenase — —
Klebsiella michiganensis M5al 0.36 BWI76_RS27210 glycerol-3-phosphate dehydrogenase 0.50 BWI76_RS04675 3-isopropylmalate dehydrogenase — —
Dickeya dianthicola 67-19 0.35 HGI48_RS00795 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 HGI48_RS18060 3-isopropylmalate dehydrogenase low > 71
Dickeya dianthicola ME23 0.35 DZA65_RS00850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 DZA65_RS19205 3-isopropylmalate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.48 CCNA_00193 3-isopropylmalate dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF402 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.50 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Caulobacter crescentus NA1000 0.35 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.48 CCNA_00193 3-isopropylmalate dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.49 CSW01_12600 3-isopropylmalate dehydrogenase — —
Pantoea sp. MT58 0.35 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.47 IAI47_16005 3-isopropylmalate dehydrogenase — —
Erwinia tracheiphila SCR3 0.34 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.47 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS15450 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.42 A4249_RS09995 3-isopropylmalate dehydrogenase — —
Acinetobacter radioresistens SK82 0.32 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.59 MPMX26_00348 3-isopropylmalate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.66 23
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.63 Psyr_1985 3-isopropylmalate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.31 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.63 Psest_2589 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.64 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.89 4
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_01735 glycerol-3-phosphate dehydrogenase 0.65 AO353_20635 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.22 92
Pseudomonas fluorescens SBW25 0.31 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas simiae WCS417 0.30 PS417_09000 glycerol-3-phosphate dehydrogenase 0.64 PS417_18585 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_19795 glycerol-3-phosphate dehydrogenase 0.64 AO356_21415 3-isopropylmalate dehydrogenase 0.88 20
Pseudomonas sp. RS175 0.30 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.64 PFR28_02821 3-isopropylmalate dehydrogenase — —
Marinobacter adhaerens HP15 0.30 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.64 HP15_1832 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.64 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_3830 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (RefSeq) 0.52 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) — —
Agrobacterium fabrum C58 0.29 Atu2650 glycerol-3-phosphate dehydrogenase 0.49 Atu2791 3-isopropylmalate dehydrogenase 0.90 3
Rhizobium sp. OAE497 0.29 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.52 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.75 17
Pseudomonas putida KT2440 0.29 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.64 PP_1988 3-isopropylmalate dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 0.54 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.93 2
Pseudomonas sp. S08-1 0.28 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.62 OH686_04470 3-isopropylmalate dehydrogenase 0.61 42
Sinorhizobium meliloti 1021 0.28 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 SMc04405 3-isopropylmalate dehydrogenase 0.78 20
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.65 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.67 20
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.56 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase — —
Bosea sp. OAE506 0.27 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.51 ABIE41_RS11860 3-isopropylmalate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.26 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.48 TX73_001175 3-isopropylmalate dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_0322 Glycerol-3-phosphate dehydrogenase 0.44 Echvi_2062 3-isopropylmalate dehydrogenase — —
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS08570 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.39 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase — —
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2123 glycerol-3-phosphate dehydrogenase (NCBI ptt file) 0.39 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_05630 glycerol-3-phosphate dehydrogenase 0.43 CA264_09445 3-isopropylmalate dehydrogenase low > 74
Bacteroides ovatus ATCC 8483 0.19 BACOVA_03234 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein 0.39 BACOVA_04600 3-isopropylmalate dehydrogenase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS01515 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.47 ABZR88_RS11605 3-isopropylmalate dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS16375 glycerol-3-phosphate dehydrogenase 0.48 CA265_RS15850 3-isopropylmalate dehydrogenase — —
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS10070 glycerol-3-phosphate dehydrogenase 0.40 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase — —
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS21145 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.39 ABI39_RS10215 3-isopropylmalate dehydrogenase — —
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS07270 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.39 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase — —

Not shown: 3 genomes with orthologs for BPHYT_RS02610 only; 3 genomes with orthologs for BPHYT_RS33900 only