| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS33915 | | isopropylmalate isomerase | 1.0 | BPHYT_RS33875 | | tryptophan synthase subunit alpha | 0.91 | 13 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.97 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | 0.97 | H281DRAFT_06067 | | tryptophan synthase, beta chain | 0.66 | 11 |
| Paraburkholderia graminis OAS925 | 0.96 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | 0.97 | ABIE53_004809 | | tryptophan synthase beta chain | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.95 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | 0.96 | QEN71_RS17645 | | tryptophan synthase subunit beta | 0.71 | 53 |
| Ralstonia solanacearum PSI07 | 0.87 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | 0.88 | RPSI07_RS14730 | | tryptophan synthase subunit beta | 0.65 | 22 |
| Ralstonia sp. UNC404CL21Col | 0.87 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.88 | ABZR87_RS14500 | | tryptophan synthase subunit beta | 0.92 | 2 |
| Ralstonia solanacearum IBSBF1503 | 0.87 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | 0.88 | RALBFv3_RS02585 | | tryptophan synthase subunit beta | — | — |
| Ralstonia solanacearum UW163 | 0.87 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | 0.88 | UW163_RS11140 | | tryptophan synthase subunit beta | — | — |
| Ralstonia solanacearum GMI1000 | 0.87 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | 0.88 | RS_RS09965 | | tryptophan synthase subunit beta | 0.44 | 13 |
| Cupriavidus basilensis FW507-4G11 | 0.86 | RR42_RS14400 | | isopropylmalate isomerase | 0.90 | RR42_RS14360 | | tryptophan synthase subunit alpha | 0.59 | 36 |
| Herbaspirillum seropedicae SmR1 | 0.80 | HSERO_RS16515 | | isopropylmalate isomerase | 0.79 | HSERO_RS16475 | | tryptophan synthase subunit alpha | 0.71 | 45 |
| Castellaniella sp019104865 MT123 | 0.77 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | 0.81 | ABCV34_RS08435 | | tryptophan synthase subunit beta | — | — |
| Variovorax sp. OAS795 | 0.75 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | 0.77 | ABID97_RS08430 | | tryptophan synthase subunit beta | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.75 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.79 | GFF3355 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.75 | 21 |
| Variovorax sp. SCN45 | 0.75 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.78 | GFF3883 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Acidovorax sp. GW101-3H11 | 0.74 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.77 | Ac3H11_1534 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.90 | 18 |
| Marinobacter adhaerens HP15 | 0.73 | HP15_1834 | | protein containing 3-isopropylmalate dehydratase, large subunit region domain | 0.67 | HP15_1827 | | tryptophan synthase, beta subunit | — | — |
| Kangiella aquimarina DSM 16071 | 0.73 | B158DRAFT_1319 | | 3-isopropylmalate dehydratase, large subunit | 0.54 | B158DRAFT_2429 | | tryptophan synthase, beta subunit | low | > 40 |
| Pseudomonas sp. RS175 | 0.73 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | 0.68 | PFR28_04715 | | Tryptophan synthase beta chain | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.73 | AO356_21400 | | isopropylmalate isomerase | 0.68 | AO356_10915 | | tryptophan synthase subunit beta | 0.91 | 19 |
| Pseudomonas fluorescens FW300-N2E3 | 0.72 | AO353_20620 | | isopropylmalate isomerase | 0.68 | AO353_10710 | | tryptophan synthase subunit beta | 0.88 | 21 |
| Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.68 | Pf6N2E2_4048 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.85 | 9 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.72 | Xcc-8004.1049.1 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.71 | Xcc-8004.1964.1 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.97 | 2 |
| Pseudomonas fluorescens GW456-L13 | 0.72 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.68 | PfGW456L13_566 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.84 | 42 |
| Pseudomonas stutzeri RCH2 | 0.72 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | 0.70 | Psest_0063 | | tryptophan synthase, beta subunit | 0.64 | 39 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.72 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.66 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.72 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.66 | Psyr_0034 | | tryptophan synthase, beta chain | 0.58 | 69 |
| Pseudomonas fluorescens FW300-N1B4 | 0.72 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.69 | Pf1N1B4_1831 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.88 | 12 |
| Pseudomonas simiae WCS417 | 0.72 | PS417_18600 | | isopropylmalate isomerase | 0.68 | PS417_00185 | | tryptophan synthase subunit beta | 0.77 | 31 |
| Pseudomonas putida KT2440 | 0.72 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.66 | PP_0083 | | tryptophan synthase beta chain | 0.82 | 26 |
| Pseudomonas fluorescens SBW25-INTG | 0.71 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.69 | PFLU_RS00180 | | tryptophan synthase subunit beta | 0.84 | 12 |
| Pseudomonas fluorescens SBW25 | 0.71 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.69 | PFLU_RS00180 | | tryptophan synthase subunit beta | 0.70 | 15 |
| Pseudomonas sp. S08-1 | 0.71 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | 0.70 | OH686_12425 | | tryptophan synthase, beta subunit | 0.75 | 24 |
| Dechlorosoma suillum PS | 0.70 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | 0.85 | Dsui_3192 | | tryptophan synthase, beta subunit | — | — |
| Rhodospirillum rubrum S1H | 0.69 | Rru_A1189 | | 3-isopropylmalate dehydratase large subunit region (NCBI) | 0.66 | Rru_A3427 | | Tryptophan synthase, beta chain (NCBI) | 0.92 | 16 |
| Acinetobacter radioresistens SK82 | 0.68 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | 0.72 | MPMX26_02617 | | Tryptophan synthase beta chain | 0.94 | 10 |
| Azospirillum sp. SherDot2 | 0.68 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | 0.67 | MPMX19_02736 | | Tryptophan synthase beta chain | 0.77 | 28 |
| Azospirillum brasilense Sp245 | 0.68 | AZOBR_RS03545 | | isopropylmalate isomerase | 0.68 | AZOBR_RS00525 | | tryptophan synthase subunit beta | 0.84 | 20 |
| Sinorhizobium meliloti 1021 | 0.66 | SMc03823 | | isopropylmalate isomerase large subunit | 0.64 | SMc02766 | | tryptophan synthase subunit beta | 0.70 | 82 |
| Bosea sp. OAE506 | 0.66 | ABIE41_RS11660 | | 3-isopropylmalate dehydratase large subunit | 0.67 | ABIE41_RS04270 | | tryptophan synthase subunit beta | — | — |
| Rhizobium sp. OAE497 | 0.65 | ABIE40_RS18380 | | 3-isopropylmalate dehydratase large subunit | 0.64 | ABIE40_RS19335 | | tryptophan synthase subunit beta | — | — |
| Agrobacterium fabrum C58 | 0.65 | Atu2709 | | 3-isopropylmalate dehydratase, large subunit | 0.64 | Atu0018 | | tryptophan synthase beta subunit | — | — |
| Rhodopseudomonas palustris CGA009 | 0.64 | TX73_001245 | | 3-isopropylmalate dehydratase large subunit | 0.67 | TX73_000360 | | tryptophan synthase subunit beta | — | — |
| Magnetospirillum magneticum AMB-1 | 0.64 | AMB_RS20560 | | 3-isopropylmalate dehydratase large subunit | 0.67 | AMB_RS20295 | | tryptophan synthase subunit beta | — | — |
| Pantoea sp. MT58 | 0.62 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | 0.53 | IAI47_09170 | | tryptophan synthase subunit beta | 0.94 | 29 |
| Escherichia fergusonii Becca | 0.62 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | 0.53 | EFB2_02665 | | Tryptophan synthase beta chain | low | > 86 |
| Enterobacter asburiae PDN3 | 0.62 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | 0.54 | EX28DRAFT_0933 | | tryptophan synthase, beta subunit | 0.60 | 65 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.62 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.53 | GFF2725 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 78 |
| Escherichia coli ECRC62 | 0.62 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.53 | BNILDI_18475 | trpB | tryptophan synthase subunit beta | 0.94 | 57 |
| Escherichia coli BL21 | 0.62 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | 0.53 | ECD_01235 | | tryptophan synthase, beta subunit | 0.78 | 51 |
| Escherichia coli ECOR27 | 0.62 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.53 | NOLOHH_20330 | trpB | tryptophan synthase subunit beta | 0.93 | 30 |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.53 | HEPCGN_25520 | trpB | tryptophan synthase subunit beta | 0.90 | 60 |
| Escherichia coli BW25113 | 0.62 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | 0.53 | b1261 | trpB | tryptophan synthase subunit beta (NCBI) | 0.91 | 35 |
| Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | 0.53 | ECOLIN_RS07600 | | tryptophan synthase subunit beta | 0.85 | 27 |
| Rahnella sp. WP5 | 0.62 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.54 | EX31_RS09975 | | tryptophan synthase subunit beta | 0.98 | 19 |
| Caulobacter crescentus NA1000 | 0.62 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.61 | CCNA_03658 | | tryptophan synthase beta chain | 0.89 | 44 |
| Caulobacter crescentus NA1000 Δfur | 0.62 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.61 | CCNA_03658 | | tryptophan synthase beta chain | low | > 67 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | 0.53 | OHPLBJKB_02422 | | Tryptophan synthase beta chain | low | > 73 |
| Dickeya dianthicola ME23 | 0.62 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.53 | DZA65_RS10945 | | tryptophan synthase subunit beta | low | > 75 |
| Dickeya dianthicola 67-19 | 0.62 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | 0.53 | HGI48_RS10465 | | tryptophan synthase subunit beta | low | > 71 |
| Escherichia coli ECRC98 | 0.61 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.53 | JDDGAC_05215 | trpB | tryptophan synthase subunit beta | 0.90 | 37 |
| Escherichia coli ECRC101 | 0.61 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.53 | MCAODC_15595 | trpB | tryptophan synthase subunit beta | 0.83 | 52 |
| Escherichia coli ECRC102 | 0.61 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.53 | NIAGMN_26840 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli ECRC99 | 0.61 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.53 | KEDOAH_26080 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli ECRC100 | 0.61 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | 0.53 | OKFHMN_02670 | trpB | tryptophan synthase subunit beta | 0.85 | 74 |
| Enterobacter sp. TBS_079 | 0.61 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | 0.54 | MPMX20_02513 | | Tryptophan synthase beta chain | 0.93 | 14 |
| Klebsiella michiganensis M5al | 0.61 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | 0.54 | BWI76_RS11845 | | tryptophan synthase subunit beta | 0.90 | 22 |
| Dickeya dadantii 3937 | 0.61 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | 0.53 | DDA3937_RS10465 | | tryptophan synthase subunit beta | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.61 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | 0.54 | HER17_RS10935 | | tryptophan synthase subunit beta | 0.98 | 7 |
| Rhodanobacter denitrificans MT42 | 0.60 | LRK55_RS07105 | | 3-isopropylmalate dehydratase large subunit | 0.70 | LRK55_RS01465 | | tryptophan synthase subunit beta | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.60 | LRK54_RS07375 | | 3-isopropylmalate dehydratase large subunit | 0.70 | LRK54_RS01685 | | tryptophan synthase subunit beta | low | > 59 |
| Serratia liquefaciens MT49 | 0.59 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | 0.53 | IAI46_14040 | | tryptophan synthase subunit beta | 0.59 | 52 |
| Phaeobacter inhibens DSM 17395 | 0.59 | PGA1_c29780 | | 3-isopropylmalate dehydratase large subunit | 0.66 | PGA1_c04870 | | tryptophan synthase beta chain | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.59 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | 0.54 | CSW01_05930 | | tryptophan synthase subunit beta | low | > 62 |
| Shewanella oneidensis MR-1 | 0.59 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | 0.53 | SO3023 | trpB | tryptophan synthase, beta subunit (NCBI ptt file) | 0.92 | 48 |
| Shewanella loihica PV-4 | 0.59 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | 0.54 | Shew_2255 | | tryptophan synthase subunit beta (RefSeq) | 0.93 | 42 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_3759 | | isopropylmalate isomerase large subunit (RefSeq) | 0.53 | Shewana3_1516 | | tryptophan synthase subunit beta (RefSeq) | 0.94 | 21 |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS02870 | leuC | 3-isopropylmalate dehydratase large subunit | 0.54 | LU632_RS12770 | trpB | tryptophan synthase subunit beta | low | > 74 |
| Shewanella amazonensis SB2B | 0.58 | Sama_0337 | | isopropylmalate isomerase large subunit (RefSeq) | 0.53 | Sama_2133 | | tryptophan synthase subunit beta (RefSeq) | 0.89 | 57 |
| Dinoroseobacter shibae DFL-12 | 0.58 | Dshi_0085 | | 3-isopropylmalate dehydratase, large subunit (RefSeq) | 0.65 | Dshi_1031 | | tryptophan synthase, beta subunit (RefSeq) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.58 | Ga0059261_4223 | | 3-isopropylmalate dehydratase, large subunit | 0.67 | Ga0059261_0238 | | tryptophan synthase, beta subunit | — | — |
| Mycobacterium tuberculosis H37Rv | 0.57 | Rv2988c | | Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | 0.62 | Rv1612 | | Tryptophan synthase, beta subunit TrpB | — | — |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_00947 | | 3-isopropylmalate dehydratase large subunit | 0.53 | MIT1002_01426 | | Tryptophan synthase beta chain | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.52 | ABZR88_RS11595 | | 3-isopropylmalate dehydratase large subunit | 0.57 | ABZR88_RS10665 | | tryptophan synthase subunit beta | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.51 | CA264_09435 | | 3-isopropylmalate dehydratase large subunit | 0.55 | CA264_05080 | | tryptophan synthase subunit beta | 0.34 | 28 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.51 | CA265_RS15830 | | 3-isopropylmalate dehydratase large subunit | 0.56 | CA265_RS05020 | | tryptophan synthase subunit beta | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.50 | BT1860 | | 3-isopropylmalate dehydratase large subunit (NCBI ptt file) | 0.51 | BT0533 | | tryptophan synthase beta chain (NCBI ptt file) | 0.81 | 43 |
| Bacteroides stercoris CC31F | 0.50 | HMPREF1181_RS14145 | | 3-isopropylmalate dehydratase large subunit | 0.53 | HMPREF1181_RS15320 | | tryptophan synthase subunit beta | 0.85 | 46 |
| Phocaeicola dorei CL03T12C01 | 0.50 | ABI39_RS10200 | | 3-isopropylmalate dehydratase large subunit | 0.51 | ABI39_RS21045 | | tryptophan synthase subunit beta | 0.77 | 46 |
| Bacteroides ovatus ATCC 8483 | 0.50 | BACOVA_04603 | | 3-isopropylmalate dehydratase, large subunit | 0.50 | BACOVA_03779 | | tryptophan synthase, beta subunit | 0.93 | 39 |
| Phocaeicola vulgatus CL09T03C04 | 0.49 | HMPREF1058_RS14550 | | 3-isopropylmalate dehydratase large subunit | 0.51 | HMPREF1058_RS07170 | | tryptophan synthase subunit beta | 0.88 | 5 |
| Parabacteroides merdae CL09T00C40 | 0.49 | HMPREF1078_RS16660 | | 3-isopropylmalate dehydratase large subunit | 0.52 | HMPREF1078_RS00150 | | tryptophan synthase subunit beta | 0.94 | 40 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.49 | Echvi_2059 | | 3-isopropylmalate dehydratase, large subunit | 0.54 | Echvi_2510 | | tryptophan synthase, beta subunit | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS15960 | | 3-isopropylmalate dehydratase large subunit | 0.72 | ABZR86_RS08000 | | tryptophan synthase subunit beta | 0.91 | 54 |
| Lysobacter sp. OAE881 | 0.48 | ABIE51_RS17575 | | 3-isopropylmalate dehydratase large subunit | 0.71 | ABIE51_RS08260 | | tryptophan synthase subunit beta | low | > 62 |
| Synechococcus elongatus PCC 7942 | 0.47 | Synpcc7942_1898 | leuC | isopropylmalate isomerase large subunit | 0.61 | Synpcc7942_2143 | trpB | tryptophan synthase subunit beta | — | — |
| Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_13585 | leuC | 3-isopropylmalate dehydratase large subunit | 0.70 | OKGIIK_04845 | trpB | tryptophan synthase subunit beta | low | > 52 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.46 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | 0.62 | A4249_RS11330 | | tryptophan synthase subunit beta | — | — |
Not shown: 1 genomes with orthologs for BPHYT_RS33915 only; 4 genomes with orthologs for BPHYT_RS33875 only