Conservation of cofitness between BPHYT_RS33900 and BPHYT_RS17395 in Burkholderia phytofirmans PsJN

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS33900 3-isopropylmalate dehydrogenase 1.0 BPHYT_RS17395 anthranilate synthase subunit II 0.90 20
Paraburkholderia graminis OAS925 0.98 ABIE53_004804 3-isopropylmalate dehydrogenase 0.95 ABIE53_003641 anthranilate synthase component 2
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.95 H281DRAFT_05714 anthranilate synthase, component II 0.46 43
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.93 QEN71_RS27555 aminodeoxychorismate/anthranilate synthase component II 0.58 75
Ralstonia sp. UNC404CL21Col 0.89 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.76 ABZR87_RS02145 aminodeoxychorismate/anthranilate synthase component II 0.79 32
Cupriavidus basilensis FW507-4G11 0.89 RR42_RS14385 3-isopropylmalate dehydrogenase 0.76 RR42_RS18300 anthranilate synthase subunit II 0.69 31
Ralstonia solanacearum PSI07 0.89 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.78 RPSI07_RS10750 type 1 glutamine amidotransferase
Ralstonia solanacearum GMI1000 0.89 RS_RS09990 3-isopropylmalate dehydrogenase 0.77 RS_RS14435 type 1 glutamine amidotransferase
Ralstonia solanacearum UW163 0.89 UW163_RS11115 3-isopropylmalate dehydrogenase 0.78 UW163_RS07135 type 1 glutamine amidotransferase
Ralstonia solanacearum IBSBF1503 0.89 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.78 RALBFv3_RS06490 type 1 glutamine amidotransferase low > 76
Herbaspirillum seropedicae SmR1 0.86 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.73 HSERO_RS19440 anthranilate synthase subunit II
Acidovorax sp. GW101-3H11 0.79 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.65 Ac3H11_769 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.88 21
Variovorax sp. SCN45 0.79 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.63 GFF5894 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)
Variovorax sp. OAS795 0.79 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.61 ABID97_RS05260 aminodeoxychorismate/anthranilate synthase component II
Hydrogenophaga sp. GW460-11-11-14-LB1 0.77 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.65 GFF3107 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.83 15
Castellaniella sp019104865 MT123 0.75 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.65 ABCV34_RS10300 aminodeoxychorismate/anthranilate synthase component II low > 48
Dechlorosoma suillum PS 0.68 Dsui_3198 3-isopropylmalate dehydrogenase 0.70 Dsui_0170 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_20635 3-isopropylmalate dehydrogenase 0.62 AO353_07220 anthranilate synthase 0.92 17
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.63 Pf1N1B4_2547 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.83 25
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.63 Pf6N2E2_4824 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.67 43
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_21415 3-isopropylmalate dehydrogenase 0.63 AO356_14430 anthranilate synthase 0.85 35
Pseudomonas putida KT2440 0.64 PP_1988 3-isopropylmalate dehydrogenase 0.62 PP_0420 aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex 0.85 23
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.63 PfGW456L13_1220 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.83 45
Pseudomonas sp. RS175 0.64 PFR28_02821 3-isopropylmalate dehydrogenase 0.63 PFR28_04045 Anthranilate synthase component 2
Marinobacter adhaerens HP15 0.64 HP15_1832 3-isopropylmalate dehydrogenase 0.61 HP15_3289 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II 0.74 33
Pseudomonas simiae WCS417 0.64 PS417_18585 3-isopropylmalate dehydrogenase 0.62 PS417_25720 anthranilate synthase component II 0.87 18
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.61 PFLU_RS27375 aminodeoxychorismate/anthranilate synthase component II 0.25 74
Pseudomonas fluorescens SBW25 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.61 PFLU_RS27375 aminodeoxychorismate/anthranilate synthase component II low > 109
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.63 Psyr_4581 anthranilate synthase, component II 0.76 31
Pseudomonas stutzeri RCH2 0.63 Psest_2589 3-isopropylmalate dehydrogenase 0.62 Psest_3649 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 0.79 27
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.63 Psyr_4581 anthranilate synthase, component II
Pseudomonas sp. S08-1 0.62 OH686_04470 3-isopropylmalate dehydrogenase 0.63 OH686_15130 Anthranilate synthase, amidotransferase component or Para-aminobenzoate synthase, amidotransferase component
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.47 Ga0059261_0926 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 0.93 42
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.59 Xcc-8004.618.1 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.87 20
Acinetobacter radioresistens SK82 0.59 MPMX26_00348 3-isopropylmalate dehydrogenase 0.61 MPMX26_00985 Anthranilate synthase component 2 0.94 11
Desulfovibrio vulgaris Miyazaki F 0.57 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.40 DvMF_1745 glutamine amidotransferase of anthranilate synthase (RefSeq) 0.72 44
Synechococcus elongatus PCC 7942 0.56 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase 0.52 Synpcc7942_0400 trpG anthranilate synthase, component II
Desulfovibrio vulgaris Hildenborough JW710 0.54 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.41 DVU0466 trpG anthranilate synthase, glutamine amidotransferase component (TIGR) 0.76 52
Phaeobacter inhibens DSM 17395 0.54 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.56 PGA1_c16880 anthranilate synthase component II
Dinoroseobacter shibae DFL-12 0.52 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) 0.56 Dshi_1798 glutamine amidotransferase of anthranilate synthase (RefSeq)
Magnetospirillum magneticum AMB-1 0.52 AMB_RS20570 3-isopropylmalate dehydrogenase 0.60 AMB_RS14405 type 1 glutamine amidotransferase
Serratia liquefaciens MT49 0.51 IAI46_03350 3-isopropylmalate dehydrogenase 0.59 IAI46_23595 aminodeoxychorismate synthase component II low > 86
Azospirillum sp. SherDot2 0.51 MPMX19_00607 3-isopropylmalate dehydrogenase 0.56 MPMX19_01016 Anthranilate synthase component 2
Bosea sp. OAE506 0.51 ABIE41_RS11860 3-isopropylmalate dehydrogenase 0.48 ABIE41_RS17415 aminodeoxychorismate/anthranilate synthase component II
Rhodospirillum rubrum S1H 0.51 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.53 Rru_A1895 Glutamine amidotransferase of anthranilate synthase (NCBI) 0.79 37
Alteromonas macleodii MIT1002 0.51 MIT1002_00948 3-isopropylmalate dehydrogenase 0.52 MIT1002_00439 Para-aminobenzoate synthase glutamine amidotransferase component II low > 70
Klebsiella michiganensis M5al 0.50 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.57 BWI76_RS26005 glutamine amidotransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.59 GFF3709 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 0.35 62
Rahnella sp. WP5 0.50 EX31_RS03685 3-isopropylmalate dehydrogenase 0.55 EX31_RS04635 aminodeoxychorismate synthase component II low > 89
Dickeya dianthicola ME23 0.50 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.59 DZA65_RS20660 aminodeoxychorismate synthase component II low > 75
Dickeya dadantii 3937 0.49 DDA3937_RS18120 3-isopropylmalate dehydrogenase 0.60 DDA3937_RS19455 aminodeoxychorismate synthase component II
Dickeya dianthicola 67-19 0.49 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.59 HGI48_RS19575 aminodeoxychorismate synthase component II
Enterobacter sp. TBS_079 0.49 MPMX20_00768 3-isopropylmalate dehydrogenase 0.57 MPMX20_04263 Aminodeoxychorismate synthase component 2 low > 85
Pectobacterium carotovorum WPP14 0.49 HER17_RS03080 3-isopropylmalate dehydrogenase 0.60 HER17_RS01905 aminodeoxychorismate synthase component II low > 75
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.57 EX28DRAFT_4169 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase low > 76
Azospirillum brasilense Sp245 0.49 AZOBR_RS14130 3-isopropylmalate dehydrogenase 0.54 AZOBR_RS07460 anthranilate synthase
Escherichia coli ECOR38 0.49 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.58 HEPCGN_16050 pabA aminodeoxychorismate synthase component 2 low > 87
Escherichia coli Nissle 1917 0.49 ECOLIN_RS00395 3-isopropylmalate dehydrogenase 0.59 ECOLIN_RS19245 aminodeoxychorismate synthase component 2 low > 55
Escherichia fergusonii Becca 0.49 EFB2_03972 3-isopropylmalate dehydrogenase 0.59 EFB2_00462 Aminodeoxychorismate synthase component 2 low > 86
Escherichia coli ECRC101 0.49 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.59 MCAODC_07750 pabA aminodeoxychorismate synthase component 2 low > 87
Escherichia coli ECRC102 0.49 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase 0.59 NIAGMN_14990 pabA aminodeoxychorismate synthase component 2
Escherichia coli ECRC98 0.49 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.59 JDDGAC_20850 pabA aminodeoxychorismate synthase component 2 low > 86
Escherichia coli ECRC99 0.49 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase 0.59 KEDOAH_10920 pabA aminodeoxychorismate synthase component 2
Escherichia coli ECRC100 0.49 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.59 OKFHMN_17220 pabA aminodeoxychorismate synthase component 2 low > 80
Escherichia coli BL21 0.49 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.59 ECD_03211 aminodeoxychorismate synthase, subunit II low > 61
Escherichia coli ECRC62 0.49 BNILDI_08545 leuA 2-isopropylmalate synthase 0.59 BNILDI_02500 pabA aminodeoxychorismate synthase component 2 low > 75
Escherichia coli BW25113 0.49 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.59 b3360 pabA para-aminobenzoate synthase component II (NCBI) low > 76
Escherichia coli ECOR27 0.49 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.59 NOLOHH_09020 pabA aminodeoxychorismate synthase component 2 low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_03584 3-isopropylmalate dehydrogenase 0.59 OHPLBJKB_00342 Aminodeoxychorismate synthase component 2 low > 73
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_12600 3-isopropylmalate dehydrogenase 0.57 CSW01_13255 aminodeoxychorismate/anthranilate synthase component II low > 62
Shewanella loihica PV-4 0.48 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.53 Shew_0575 glutamine amidotransferase of anthranilate synthase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.48 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.51 SO0613 pabA para-aminobenzoate synthase glutamine amidotransferase, component II (NCBI ptt file) low > 76
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS15850 3-isopropylmalate dehydrogenase 0.41 CA265_RS22895 aminodeoxychorismate/anthranilate synthase component II 0.69 70
Shewanella sp. ANA-3 0.48 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.52 Shewana3_0606 aminodeoxychorismate synthase, glutamine amidotransferase subunit (RefSeq) low > 73
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_00193 3-isopropylmalate dehydrogenase 0.57 CCNA_01974 anthranilate synthase component II/para-aminobenzoate synthase glutamine amidotransferase component II low > 67
Caulobacter crescentus NA1000 0.48 CCNA_00193 3-isopropylmalate dehydrogenase 0.57 CCNA_01974 anthranilate synthase component II/para-aminobenzoate synthase glutamine amidotransferase component II 0.90 39
Pantoea sp. MT58 0.47 IAI47_16005 3-isopropylmalate dehydrogenase 0.57 IAI47_01950 aminodeoxychorismate/anthranilate synthase component II low > 76
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS11605 3-isopropylmalate dehydrogenase 0.41 ABZR88_RS16600 aminodeoxychorismate/anthranilate synthase component II
Erwinia tracheiphila SCR3 0.47 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.56 LU632_RS22815 aminodeoxychorismate synthase component II
Shewanella amazonensis SB2B 0.47 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.50 Sama_3015 para-aminobenzoate synthase glutamine amidotransferase, component II (RefSeq) low > 62
Lysobacter sp. OAE881 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.61 ABIE51_RS04175 aminodeoxychorismate/anthranilate synthase component II low > 62
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_2062 3-isopropylmalate dehydrogenase 0.42 Echvi_2506 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
Pontibacter actiniarum KMM 6156, DSM 19842 0.43 CA264_09445 3-isopropylmalate dehydrogenase 0.43 CA264_05060 glutamine amidotransferase low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS09995 3-isopropylmalate dehydrogenase 0.57 A4249_RS06165 aminodeoxychorismate/anthranilate synthase component II low > 48
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase 0.63 OKGIIK_12290 pabA anthranilate/aminodeoxychorismate synthase component II low > 52
Rhodanobacter denitrificans MT42 0.41 LRK55_RS09965 3-isopropylmalate dehydrogenase 0.62 LRK55_RS11290 aminodeoxychorismate/anthranilate synthase component II low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.62 LRK54_RS11560 aminodeoxychorismate/anthranilate synthase component II low > 59
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.62 ABZR86_RS12075 aminodeoxychorismate/anthranilate synthase component II
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.42 HMPREF1078_RS00140 aminodeoxychorismate/anthranilate synthase component II low > 61
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.43 HMPREF1058_RS07180 aminodeoxychorismate/anthranilate synthase component II 0.75 22
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.42 ABI39_RS21055 aminodeoxychorismate/anthranilate synthase component II 0.66 66
Bacteroides ovatus ATCC 8483 0.39 BACOVA_04600 3-isopropylmalate dehydrogenase 0.43 BACOVA_03781 glutamine amidotransferase, class I 0.87 56
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.45 HMPREF1181_RS15330 aminodeoxychorismate/anthranilate synthase component II 0.83 51
Bacteroides thetaiotaomicron VPI-5482 0.39 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.43 BT0531 anthranilate synthase component II (NCBI ptt file) 0.72 55
Methanococcus maripaludis S2 0.30 MMP_RS04575 homoisocitrate dehydrogenase 0.38 MMP_RS05200 aminodeoxychorismate/anthranilate synthase component II

Not shown: 5 genomes with orthologs for BPHYT_RS33900 only; 4 genomes with orthologs for BPHYT_RS17395 only