| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS16835 | | glyceraldehyde-3-phosphate dehydrogenase | 1.0 | BPHYT_RS15920 | | argininosuccinate synthase | 0.82 | 9 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.99 | H281DRAFT_06315 | | glyceraldehyde-3-phosphate dehydrogenase (NAD+) | 0.99 | H281DRAFT_04120 | | argininosuccinate synthase | 0.43 | 20 |
| Paraburkholderia graminis OAS925 | 0.99 | ABIE53_003536 | | glyceraldehyde 3-phosphate dehydrogenase | 1.00 | ABIE53_003355 | | argininosuccinate synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.96 | QEN71_RS27005 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.16 | QEN71_RS09235 | | argininosuccinate synthase | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.89 | HSERO_RS07125 | | glyceraldehyde-3-phosphate dehydrogenase | 0.16 | HSERO_RS07180 | | argininosuccinate synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.76 | ABZR86_RS18615 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.20 | ABZR86_RS08715 | | arginosuccinate synthetase (EC 6.3.4.5) (from data) | 0.75 | 13 |
| Shewanella sp. ANA-3 | 0.72 | Shewana3_2124 | | glyceraldehyde-3-phosphate dehydrogenase (RefSeq) | 0.46 | Shewana3_3902 | | argininosuccinate synthase (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.71 | Shew_2002 | | glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) | 0.45 | Shew_0205 | | argininosuccinate synthase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.71 | SO2345 | gapA-2 | glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) | 0.46 | SO0278 | argG | argininosuccinate synthase (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.71 | Sama_1808 | | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) (RefSeq) | 0.45 | Sama_0259 | | argininosuccinate synthase (RefSeq) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.67 | Psyr_1108 | | glyceraldehyde-3-phosphate dehydrogenase | 0.74 | Psyr_3892 | | argininosuccinate synthase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.67 | Psyr_1108 | | glyceraldehyde-3-phosphate dehydrogenase | 0.74 | Psyr_3892 | | argininosuccinate synthase | — | — |
| Kangiella aquimarina DSM 16071 | 0.67 | B158DRAFT_0511 | | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC 1.2.1.12) | 0.22 | B158DRAFT_1976 | | argininosuccinate synthase (EC 6.3.4.5) | — | — |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS24335 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.74 | PFLU_RS05725 | | argininosuccinate synthase | — | — |
| Pseudomonas simiae WCS417 | 0.66 | PS417_22695 | | glyceraldehyde-3-phosphate dehydrogenase | 0.75 | PS417_05640 | | argininosuccinate synthase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS24335 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.74 | PFLU_RS05725 | | argininosuccinate synthase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.66 | Pf1N1B4_602 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.75 | Pf1N1B4_742 | | Argininosuccinate synthase (EC 6.3.4.5) | 0.41 | 60 |
| Pseudomonas sp. RS175 | 0.65 | PFR28_00560 | | Glyceraldehyde-3-phosphate dehydrogenase 1 | 0.75 | PFR28_03353 | | Argininosuccinate synthase | — | — |
| Marinobacter adhaerens HP15 | 0.65 | HP15_2175 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.74 | HP15_2367 | | argininosuccinate synthase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.65 | PfGW456L13_1888 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.74 | PfGW456L13_1749 | | Argininosuccinate synthase (EC 6.3.4.5) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.65 | AO353_03425 | | glyceraldehyde-3-phosphate dehydrogenase | 0.74 | AO353_04105 | | argininosuccinate synthase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.65 | AO356_05225 | | glyceraldehyde-3-phosphate dehydrogenase | 0.75 | AO356_18325 | | argininosuccinate synthase | 0.39 | 30 |
| Pseudomonas fluorescens FW300-N2E2 | 0.65 | Pf6N2E2_2899 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.75 | Pf6N2E2_5590 | | Argininosuccinate synthase (EC 6.3.4.5) | — | — |
| Sinorhizobium meliloti 1021 | 0.62 | SMc03979 | | glyceraldehyde-3-phosphate dehydrogenase | 0.64 | SMc03826 | | argininosuccinate synthase | 0.63 | 83 |
| Pseudomonas putida KT2440 | 0.62 | PP_1009 | | glyceraldehyde-3-phosphate dehydrogenase | 0.76 | PP_1088 | | Argininosuccinate synthase | low | > 96 |
| Rhodopseudomonas palustris CGA009 | 0.61 | TX73_004865 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.14 | TX73_002040 | | argininosuccinate synthase | — | — |
| Rhodospirillum rubrum S1H | 0.61 | Rru_A0222 | | Glyceraldehyde-3-phosphate dehydrogenase, type I (NCBI) | 0.68 | Rru_A3751 | | Argininosuccinate synthase (NCBI) | — | — |
| Agrobacterium fabrum C58 | 0.61 | Atu3737 | | glyceraldehyde 3-phosphate dehydrogenase | 0.64 | Atu2667 | | argininosuccinate synthase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.60 | Ga0059261_0730 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.64 | Ga0059261_1393 | | argininosuccinate synthase (EC 6.3.4.5) | — | — |
| Rhizobium sp. OAE497 | 0.60 | ABIE40_RS15870 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.64 | ABIE40_RS18150 | | argininosuccinate synthase | — | — |
| Azospirillum brasilense Sp245 | 0.59 | AZOBR_RS10375 | | glyceraldehyde-3-phosphate dehydrogenase | 0.70 | AZOBR_RS00785 | | argininosuccinate synthase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.59 | Dshi_1742 | | glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) | 0.65 | Dshi_3472 | | Argininosuccinate synthase (RefSeq) | — | — |
| Azospirillum sp. SherDot2 | 0.59 | MPMX19_02850 | | Glyceraldehyde-3-phosphate dehydrogenase 1 | 0.70 | MPMX19_02369 | | Argininosuccinate synthase | — | — |
| Dechlorosoma suillum PS | 0.58 | Dsui_1560 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.84 | Dsui_3248 | | argininosuccinate synthase | — | — |
| Bosea sp. OAE506 | 0.58 | ABIE41_RS09420 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.64 | ABIE41_RS00340 | | argininosuccinate synthase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.57 | A4249_RS10040 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.67 | A4249_RS14275 | | argininosuccinate synthase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.56 | PGA1_c27490 | | glyceraldehyde-3-phosphate dehydrogenase Gap | 0.67 | PGA1_c34920 | | argininosuccinate synthase ArgG | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.56 | CCNA_03358 | | glyceraldehyde 3-phosphate dehydrogenase | 0.67 | CCNA_00128 | | argininosuccinate synthase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.56 | CCNA_03358 | | glyceraldehyde 3-phosphate dehydrogenase | 0.67 | CCNA_00128 | | argininosuccinate synthase | — | — |
| Escherichia coli BW25113 | 0.55 | b2927 | epd | D-erythrose 4-phosphate dehydrogenase (NCBI) | 0.14 | b3172 | argG | argininosuccinate synthase (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_23015 | epd | erythrose-4-phosphate dehydrogenase | 0.14 | JDDGAC_21715 | argG | argininosuccinate synthase | low | > 86 |
| Escherichia coli ECRC62 | 0.55 | BNILDI_09835 | epd | erythrose-4-phosphate dehydrogenase | 0.14 | BNILDI_01645 | argG | argininosuccinate synthase | low | > 75 |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_17150 | epd | erythrose-4-phosphate dehydrogenase | 0.14 | NIAGMN_15850 | argG | argininosuccinate synthase | — | — |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS16265 | | erythrose-4-phosphate dehydrogenase | 0.14 | ECOLIN_RS18275 | | argininosuccinate synthase | low | > 55 |
| Escherichia coli BL21 | 0.55 | ECD_02758 | | D-erythrose 4-phosphate dehydrogenase | 0.14 | ECD_03038 | | argininosuccinate synthetase | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_00789 | | D-erythrose-4-phosphate dehydrogenase | 0.14 | OHPLBJKB_00528 | | Argininosuccinate synthase | low | > 73 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_09905 | epd | erythrose-4-phosphate dehydrogenase | 0.14 | MCAODC_08610 | argG | argininosuccinate synthase | low | > 87 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_08755 | epd | erythrose-4-phosphate dehydrogenase | 0.14 | KEDOAH_10060 | argG | argininosuccinate synthase | — | — |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_11295 | epd | erythrose-4-phosphate dehydrogenase | 0.14 | NOLOHH_09890 | argG | argininosuccinate synthase | low | > 75 |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_19385 | epd | erythrose-4-phosphate dehydrogenase | 0.14 | OKFHMN_18090 | argG | argininosuccinate synthase | 0.69 | 16 |
| Pantoea sp. MT58 | 0.55 | IAI47_03685 | | erythrose-4-phosphate dehydrogenase | 0.47 | IAI47_00915 | | argininosuccinate synthase | low | > 76 |
| Escherichia fergusonii Becca | 0.54 | EFB2_00979 | | D-erythrose-4-phosphate dehydrogenase | 0.14 | EFB2_00651 | | Argininosuccinate synthase | low | > 86 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_18695 | epd | erythrose-4-phosphate dehydrogenase | 0.14 | HEPCGN_16965 | argG | argininosuccinate synthase | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.53 | Psest_3784 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.76 | Psest_3121 | | argininosuccinate synthase | — | — |
| Serratia liquefaciens MT49 | 0.53 | IAI46_21015 | | erythrose-4-phosphate dehydrogenase | 0.48 | IAI46_24505 | | argininosuccinate synthase | low | > 86 |
| Rahnella sp. WP5 | 0.52 | EX31_RS21405 | | erythrose-4-phosphate dehydrogenase | 0.15 | EX31_RS13445 | | argininosuccinate synthase | low | > 89 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.52 | CA264_03770 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.18 | CA264_06255 | | argininosuccinate synthase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.52 | Rv1436 | | Probable glyceraldehyde 3-phosphate dehydrogenase Gap (GAPDH) | 0.34 | Rv1658 | | Probable argininosuccinate synthase ArgG | — | — |
| Erwinia tracheiphila SCR3 | 0.52 | LU632_RS05535 | epd | erythrose-4-phosphate dehydrogenase | 0.47 | LU632_RS19605 | | argininosuccinate synthase | low | > 74 |
| Pseudomonas sp. S08-1 | 0.51 | OH686_10765 | | erythrose-4-phosphate dehydrogenase | 0.74 | OH686_03930 | | argininosuccinate synthase | — | — |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_00862 | | D-erythrose-4-phosphate dehydrogenase | 0.46 | MIT1002_00468 | | Argininosuccinate synthase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.50 | CSW01_02530 | | D-erythrose-4-phosphate dehydrogenase | 0.47 | CSW01_13370 | | argininosuccinate synthase | low | > 62 |
| Variovorax sp. SCN45 | 0.49 | GFF7175 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.15 | GFF3096 | | Argininosuccinate synthase (EC 6.3.4.5) | — | — |
| Ralstonia solanacearum PSI07 | 0.49 | RPSI07_RS11435 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.15 | RPSI07_RS12120 | | argininosuccinate synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.49 | RALBFv3_RS05865 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.15 | RALBFv3_RS05180 | | argininosuccinate synthase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.49 | DVU0565 | gap-1 | glyceraldehyde 3-phosphate dehydrogenase (TIGR) | 0.59 | DVU1095 | argG | argininosuccinate synthase (TIGR) | low | > 55 |
| Ralstonia solanacearum GMI1000 | 0.49 | RS_RS13755 | | aldehyde dehydrogenase | 0.15 | RS_RS12800 | | argininosuccinate synthase | — | — |
| Variovorax sp. OAS795 | 0.49 | ABID97_RS02440 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.15 | ABID97_RS21670 | | argininosuccinate synthase | — | — |
| Ralstonia solanacearum UW163 | 0.49 | UW163_RS07760 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.15 | UW163_RS08445 | | argininosuccinate synthase | — | — |
| Rhodanobacter denitrificans MT42 | 0.49 | LRK55_RS05540 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.19 | LRK55_RS02155 | | argininosuccinate synthase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.49 | LRK54_RS05785 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.19 | LRK54_RS02400 | | argininosuccinate synthase | low | > 59 |
| Ralstonia sp. UNC404CL21Col | 0.49 | ABZR87_RS01435 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.15 | ABZR87_RS00835 | | argininosuccinate synthase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.48 | RR42_RS17570 | | glyceraldehyde-3-phosphate dehydrogenase | 0.91 | RR42_RS17170 | | argininosuccinate synthase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.48 | CA265_RS01860 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.18 | CA265_RS18545 | | argininosuccinate synthase | low | > 88 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.48 | ABZR88_RS12470 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.19 | ABZR88_RS15515 | | argininosuccinate synthase | — | — |
| Lysobacter sp. OAE881 | 0.47 | ABIE51_RS17095 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.19 | ABIE51_RS13405 | | argininosuccinate synthase | low | > 62 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.47 | Echvi_3029 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.19 | Echvi_3846 | | argininosuccinate synthase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.47 | OKGIIK_01060 | gap | type I glyceraldehyde-3-phosphate dehydrogenase | 0.19 | OKGIIK_09465 | argG | argininosuccinate synthase | low | > 52 |
| Synechococcus elongatus PCC 7942 | 0.47 | Synpcc7942_1742 | gap2 | glyceraldehyde-3-phosphate dehydrogenase | 0.41 | Synpcc7942_0009 | argG | argininosuccinate synthase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.1236.1 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.20 | Xcc-8004.2318.1 | | Argininosuccinate synthase (EC 6.3.4.5) | 0.39 | 42 |
| Acidovorax sp. GW101-3H11 | 0.46 | Ac3H11_648 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.14 | Ac3H11_2616 | | Argininosuccinate synthase (EC 6.3.4.5) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.46 | DvMF_1440 | | glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq) | 0.57 | DvMF_0047 | | argininosuccinate synthase (RefSeq) | low | > 51 |
| Parabacteroides merdae CL09T00C40 | 0.45 | HMPREF1078_RS15885 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.18 | HMPREF1078_RS10575 | | argininosuccinate synthase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.45 | BACOVA_05096 | | glyceraldehyde-3-phosphate dehydrogenase, type I | 0.17 | BACOVA_03590 | | putative argininosuccinate synthase | — | — |
| Phocaeicola dorei CL03T12C01 | 0.45 | ABI39_RS17975 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.17 | ABI39_RS02975 | | argininosuccinate synthase | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.45 | HMPREF1058_RS06050 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.17 | HMPREF1058_RS08845 | | argininosuccinate synthase | — | — |
| Bacteroides stercoris CC31F | 0.45 | HMPREF1181_RS06145 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.17 | HMPREF1181_RS03460 | | argininosuccinate synthase | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.45 | BT4263 | | glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) | 0.17 | BT3760 | | arginosuccinate synthetase (EC 6.3.4.5) (from data) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.44 | AMB_RS02635 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.68 | AMB_RS05720 | | argininosuccinate synthase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF1114 | | NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 0.14 | GFF294 | | Argininosuccinate synthase (EC 6.3.4.5) | — | — |
| Bifidobacterium breve UCC2003 | 0.38 | BBR_RS16790 | | type I glyceraldehyde-3-phosphate dehydrogenase | 0.35 | BBR_RS13915 | | argininosuccinate synthase | — | — |
Not shown: 11 genomes with orthologs for BPHYT_RS16835 only; 2 genomes with orthologs for BPHYT_RS15920 only