Conservation of cofitness between BPHYT_RS18705 and BPHYT_RS13705 in Burkholderia phytofirmans PsJN

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS18705 5,10-methylenetetrahydrofolate reductase 1.0 BPHYT_RS13705 chorismate synthase 0.54 14
Paraburkholderia graminis OAS925 0.97 ABIE53_000061 methylenetetrahydrofolate reductase (NADPH) 0.97 ABIE53_002916 chorismate synthase
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_05801 5,10-methylenetetrahydrofolate reductase (NAD(P)) 0.97 H281DRAFT_04489 chorismate synthase
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS28715 methylenetetrahydrofolate reductase [NAD(P)H] 0.95 QEN71_RS05215 chorismate synthase 0.83 47
Ralstonia solanacearum GMI1000 0.80 RS_RS00460 methylenetetrahydrofolate reductase [NAD(P)H] 0.84 RS_RS07885 chorismate synthase 0.55 26
Cupriavidus basilensis FW507-4G11 0.80 RR42_RS01385 5,10-methylenetetrahydrofolate reductase 0.86 RR42_RS06485 chorismate synthase 0.82 6
Ralstonia solanacearum UW163 0.79 UW163_RS03705 methylenetetrahydrofolate reductase [NAD(P)H] 0.84 UW163_RS15160 chorismate synthase
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS09875 methylenetetrahydrofolate reductase [NAD(P)H] 0.84 RALBFv3_RS01850 chorismate synthase
Ralstonia solanacearum PSI07 0.79 RPSI07_RS23495 methylenetetrahydrofolate reductase [NAD(P)H] 0.84 RPSI07_RS15640 chorismate synthase
Ralstonia sp. UNC404CL21Col 0.79 ABZR87_RS04865 methylenetetrahydrofolate reductase [NAD(P)H] 0.87 ABZR87_RS13790 chorismate synthase 0.80 3
Herbaspirillum seropedicae SmR1 0.71 HSERO_RS21425 5,10-methylenetetrahydrofolate reductase 0.80 HSERO_RS16525 chorismate synthase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF1692 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.77 GFF5239 Chorismate synthase (EC 4.2.3.5)
Dechlorosoma suillum PS 0.64 Dsui_0640 5,10-methylenetetrahydrofolate reductase 0.77 Dsui_3204 chorismate synthase
Variovorax sp. SCN45 0.63 GFF2055 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.70 GFF2627 Chorismate synthase (EC 4.2.3.5) low > 127
Acidovorax sp. GW101-3H11 0.63 Ac3H11_3045 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.76 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) 0.84 26
Marinobacter adhaerens HP15 0.62 HP15_2917 5,10-methylenetetrahydrofolate reductase-like protein 0.71 HP15_1838 chorismate synthase
Variovorax sp. OAS795 0.62 ABID97_RS25015 methylenetetrahydrofolate reductase [NAD(P)H] 0.70 ABID97_RS19805 chorismate synthase
Pseudomonas sp. RS175 0.60 PFR28_04202 5,10-methylenetetrahydrofolate reductase 0.64 PFR28_03126 Chorismate synthase
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_4638 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.64 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5)
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_13605 5,10-methylenetetrahydrofolate reductase 0.64 AO356_19540 chorismate synthase
Pseudomonas sp. S08-1 0.60 OH686_10820 methylenetetrahydrofolate reductase [NAD(P)H] 0.66 OH686_00675 chorismate synthase
Pseudomonas fluorescens SBW25 0.59 PFLU_RS28165 methylenetetrahydrofolate reductase [NAD(P)H] 0.64 PFLU_RS21280 chorismate synthase
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS28165 methylenetetrahydrofolate reductase [NAD(P)H] 0.64 PFLU_RS21280 chorismate synthase
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS12030 methylenetetrahydrofolate reductase [NAD(P)H] 0.66 LRK54_RS01725 chorismate synthase
Pseudomonas simiae WCS417 0.59 PS417_26510 5,10-methylenetetrahydrofolate reductase 0.64 PS417_19315 chorismate synthase
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_08015 5,10-methylenetetrahydrofolate reductase 0.65 AO353_02250 chorismate synthase low > 101
Rhodanobacter denitrificans MT42 0.59 LRK55_RS11765 methylenetetrahydrofolate reductase [NAD(P)H] 0.66 LRK55_RS01505 chorismate synthase low > 63
Pseudomonas putida KT2440 0.59 PP_4977 5,10-methylenetetrahydrofolate reductase 0.66 PP_1830 Chorismate synthase
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2384 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.65 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5)
Castellaniella sp019104865 MT123 0.58 ABCV34_RS13550 methylenetetrahydrofolate reductase [NAD(P)H] 0.76 ABCV34_RS04300 chorismate synthase
Pseudomonas stutzeri RCH2 0.58 Psest_0313 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.65 Psest_1903 chorismate synthase
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_11830 metF methylenetetrahydrofolate reductase [NAD(P)H] 0.67 OKGIIK_04805 aroC chorismate synthase low > 52
Lysobacter sp. OAE881 0.58 ABIE51_RS16490 methylenetetrahydrofolate reductase [NAD(P)H] 0.65 ABIE51_RS08220 chorismate synthase
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_1050 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.65 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) 0.70 63
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS11570 methylenetetrahydrofolate reductase [NAD(P)H] 0.70 ABZR86_RS08040 chorismate synthase 0.90 63
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_0459 5,10-methylenetetrahydrofolate reductase 0.65 Psyr_1853 chorismate synthase
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_0459 5,10-methylenetetrahydrofolate reductase 0.65 Psyr_1853 chorismate synthase
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.4336.1 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.67 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) low > 74
Acinetobacter radioresistens SK82 0.50 MPMX26_01002 5,10-methylenetetrahydrofolate reductase 0.58 MPMX26_01340 Chorismate synthase
Serratia liquefaciens MT49 0.43 IAI46_24530 methylenetetrahydrofolate reductase 0.63 IAI46_18025 chorismate synthase 0.60 52
Rahnella sp. WP5 0.43 EX31_RS14205 methylenetetrahydrofolate reductase 0.63 EX31_RS19685 chorismate synthase
Enterobacter sp. TBS_079 0.42 MPMX20_04529 5,10-methylenetetrahydrofolate reductase 0.61 MPMX20_03264 Chorismate synthase 0.67 50
Dickeya dadantii 3937 0.42 DDA3937_RS00960 methylenetetrahydrofolate reductase 0.62 DDA3937_RS14580 chorismate synthase
Dickeya dianthicola 67-19 0.42 HGI48_RS20415 methylenetetrahydrofolate reductase 0.63 HGI48_RS14530 chorismate synthase
Dickeya dianthicola ME23 0.42 DZA65_RS21460 methylenetetrahydrofolate reductase 0.63 DZA65_RS15465 chorismate synthase
Pectobacterium carotovorum WPP14 0.42 HER17_RS00950 methylenetetrahydrofolate reductase 0.63 HER17_RS06935 chorismate synthase low > 75
Enterobacter asburiae PDN3 0.42 EX28DRAFT_4413 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.61 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5)
Klebsiella michiganensis M5al 0.42 BWI76_RS00805 5,10-methylenetetrahydrofolate reductase 0.61 BWI76_RS20435 chorismate synthase 0.67 69
Pantoea sp. MT58 0.42 IAI47_00890 methylenetetrahydrofolate reductase 0.61 IAI47_06150 chorismate synthase
Escherichia coli BW25113 0.42 b3941 metF 5,10-methylenetetrahydrofolate reductase (NCBI) 0.62 b2329 aroC chorismate synthase (NCBI) 0.92 44
Escherichia coli BL21 0.42 ECD_03827 5,10-methylenetetrahydrofolate reductase 0.62 ECD_02254 chorismate synthase 0.72 55
Escherichia coli ECRC101 0.42 MCAODC_04165 metF methylenetetrahydrofolate reductase 0.62 MCAODC_13655 aroC chorismate synthase 0.82 56
Escherichia coli ECRC62 0.42 BNILDI_05725 metF methylenetetrahydrofolate reductase 0.62 BNILDI_13170 aroC chorismate synthase 0.91 63
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_04109 5,10-methylenetetrahydrofolate reductase 0.62 OHPLBJKB_01376 Chorismate synthase low > 73
Escherichia coli ECRC98 0.42 JDDGAC_17290 metF methylenetetrahydrofolate reductase 0.62 JDDGAC_26575 aroC chorismate synthase 0.95 17
Escherichia coli ECRC102 0.42 NIAGMN_11420 metF methylenetetrahydrofolate reductase 0.62 NIAGMN_20390 aroC chorismate synthase
Escherichia coli ECOR38 0.42 HEPCGN_12310 metF methylenetetrahydrofolate reductase 0.62 HEPCGN_21820 aroC chorismate synthase 0.88 57
Escherichia coli ECOR27 0.42 NOLOHH_05810 metF methylenetetrahydrofolate reductase 0.62 NOLOHH_14250 aroC chorismate synthase 0.94 33
Escherichia coli ECRC100 0.42 OKFHMN_13665 metF methylenetetrahydrofolate reductase 0.62 OKFHMN_22615 aroC chorismate synthase 0.96 43
Escherichia coli ECRC99 0.42 KEDOAH_14495 metF methylenetetrahydrofolate reductase 0.62 KEDOAH_05580 aroC chorismate synthase
Escherichia fergusonii Becca 0.41 EFB2_04672 5,10-methylenetetrahydrofolate reductase 0.62 EFB2_01529 Chorismate synthase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2329 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.63 GFF1950 Chorismate synthase (EC 4.2.3.5) 0.36 24
Escherichia coli Nissle 1917 0.41 ECOLIN_RS22760 methylenetetrahydrofolate reductase 0.62 ECOLIN_RS13490 chorismate synthase
Erwinia tracheiphila SCR3 0.41 LU632_RS19630 metF methylenetetrahydrofolate reductase 0.65 LU632_RS07775 aroC chorismate synthase low > 74
Azospirillum brasilense Sp245 0.40 AZOBR_RS09540 5 10-methylenetetrahydrofolate reductase 0.58 AZOBR_RS10730 chorismate synthase
Magnetospirillum magneticum AMB-1 0.40 AMB_RS02230 methylenetetrahydrofolate reductase 0.57 AMB_RS08025 chorismate synthase
Rhodospirillum rubrum S1H 0.39 Rru_A1530 5,10-methylenetetrahydrofolate reductase (NCBI) 0.56 Rru_A2623 Chorismate synthase (NCBI)
Azospirillum sp. SherDot2 0.39 MPMX19_00635 5,10-methylenetetrahydrofolate reductase 0.56 MPMX19_01810 Chorismate synthase
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_0992 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.48 Ga0059261_2470 chorismate synthase (EC 4.2.3.5)
Bosea sp. OAE506 0.38 ABIE41_RS12475 methylenetetrahydrofolate reductase [NAD(P)H] 0.53 ABIE41_RS10190 chorismate synthase
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_13560 methylenetetrahydrofolate reductase 0.64 CSW01_10560 chorismate synthase low > 62
Shewanella loihica PV-4 0.38 Shew_0522 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.63 Shew_2416 chorismate synthase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.38 Sama_3169 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.65 Sama_2159 chorismate synthase (RefSeq)
Alteromonas macleodii MIT1002 0.37 MIT1002_03670 5,10-methylenetetrahydrofolate reductase 0.66 MIT1002_01229 Chorismate synthase
Shewanella sp. ANA-3 0.37 Shewana3_3612 metF 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.62 Shewana3_1469 chorismate synthase (RefSeq) 0.93 33
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2461 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) 0.47 B158DRAFT_2433 chorismate synthase (EC 4.2.3.5) low > 40
Caulobacter crescentus NA1000 0.36 CCNA_02224 methylenetetrahydrofolate reductase 0.47 CCNA_03256 chorismate synthase low > 66
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_02224 methylenetetrahydrofolate reductase 0.47 CCNA_03256 chorismate synthase low > 67
Rhizobium sp. OAE497 0.35 ABIE40_RS11950 methylenetetrahydrofolate reductase [NAD(P)H] 0.50 ABIE40_RS03980 chorismate synthase
Agrobacterium fabrum C58 0.35 Atu2123 methylenetetrahydrofolate reductase 0.48 Atu0754 chorismate synthase
Phaeobacter inhibens DSM 17395 0.35 PGA1_c11700 5,10-methylenetetrahydrofolate reductase MetF 0.53 PGA1_c34060 chorismate synthase AroC
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU0997 metF 5,10-methylenetetrahydrofolate reductase (TIGR) 0.47 DVU0894 aroC chorismate synthase (TIGR)
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS07925 methylenetetrahydrofolate reductase [NAD(P)H] 0.50 A4249_RS08790 chorismate synthase
Sinorhizobium meliloti 1021 0.34 SMc01843 5,10-methylenetetrahydrofolate reductase 0.50 SMc00007 chorismate synthase
Rhodopseudomonas palustris CGA009 0.34 TX73_019175 methylenetetrahydrofolate reductase [NAD(P)H] 0.54 TX73_006170 chorismate synthase
Desulfovibrio vulgaris Miyazaki F 0.33 DvMF_3034 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.45 DvMF_1408 chorismate synthase (RefSeq)
Dinoroseobacter shibae DFL-12 0.30 Dshi_2080 5,10-methylenetetrahydrofolate reductase (RefSeq) 0.54 Dshi_3275 Chorismate synthase (RefSeq)
Fusobacterium nucleatum SB010 0.30 HUW76_02285 methylenetetrahydrofolate reductase [NAD(P)H] 0.31 HUW76_05440 chorismate synthase low > 35
Bifidobacterium breve UCC2003 0.27 BBR_RS15410 methylenetetrahydrofolate reductase [NAD(P)H] 0.23 BBR_RS15080 chorismate synthase low > 34
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS15570 methylenetetrahydrofolate reductase [NAD(P)H] 0.39 ABI39_RS12645 chorismate synthase low > 72
Phocaeicola vulgatus CL09T03C04 0.24 HMPREF1058_RS01490 methylenetetrahydrofolate reductase [NAD(P)H] 0.39 HMPREF1058_RS16730 chorismate synthase low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_3637 5,10-methylenetetrahydrofolate reductase, prokaryotic form 0.47 Echvi_1518 chorismate synthase
Pedobacter sp. GW460-11-11-14-LB5 0.22 CA265_RS23445 methylenetetrahydrofolate reductase [NAD(P)H] 0.45 CA265_RS11645 chorismate synthase
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_16780 methylenetetrahydrofolate reductase [NAD(P)H] 0.43 CA264_19835 chorismate synthase
Bacteroides thetaiotaomicron VPI-5482 0.21 BT3821 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) 0.38 BT2084 chorismate synthase (NCBI ptt file)
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS00120 methylenetetrahydrofolate reductase [NAD(P)H] 0.39 HMPREF1181_RS08365 chorismate synthase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.20 ABZR88_RS20935 methylenetetrahydrofolate reductase [NAD(P)H] 0.43 ABZR88_RS06995 chorismate synthase
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS07860 methylenetetrahydrofolate reductase [NAD(P)H] 0.43 HMPREF1078_RS16710 chorismate synthase low > 61
Bacteroides ovatus ATCC 8483 0.17 BACOVA_03666 methylenetetrahydrofolate reductase (NAD(P)H) 0.38 BACOVA_03296 chorismate synthase low > 94

Not shown: 1 genomes with orthologs for BPHYT_RS18705 only; 4 genomes with orthologs for BPHYT_RS13705 only