Conservation of cofitness between BPHYT_RS14845 and BPHYT_RS06610 in Burkholderia phytofirmans PsJN

95 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14845 cysteine synthase 1.0 BPHYT_RS06610 triosephosphate isomerase 0.77 7
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_03911 cysteine synthase 0.87 H281DRAFT_04564 triosephosphate isomerase — —
Paraburkholderia graminis OAS925 0.94 ABIE53_003144 cysteine synthase B 0.88 ABIE53_001588 triosephosphate isomerase low > 113
Paraburkholderia sabiae LMG 24235 0.94 QEN71_RS04135 cysteine synthase CysM 0.80 QEN71_RS24165 triose-phosphate isomerase — —
Ralstonia solanacearum GMI1000 0.83 RS_RS04560 cysteine synthase CysM 0.59 RS_RS10360 triose-phosphate isomerase — —
Ralstonia solanacearum UW163 0.82 UW163_RS15985 cysteine synthase CysM 0.59 UW163_RS10735 triose-phosphate isomerase — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS13825 cysteine synthase CysM 0.59 RALBFv3_RS02990 triose-phosphate isomerase — —
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS09515 cysteine synthase CysM 0.60 ABZR87_RS14895 triose-phosphate isomerase — —
Ralstonia solanacearum PSI07 0.82 RPSI07_RS19645 cysteine synthase CysM 0.59 RPSI07_RS14320 triose-phosphate isomerase — —
Herbaspirillum seropedicae SmR1 0.82 HSERO_RS04915 cysteine synthase 0.45 HSERO_RS08805 triosephosphate isomerase — —
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04535 cysteine synthase 0.61 RR42_RS05495 triosephosphate isomerase — —
Dechlorosoma suillum PS 0.79 Dsui_1954 cysteine synthase B 0.49 Dsui_3052 triosephosphate isomerase — —
Variovorax sp. SCN45 0.75 GFF6025 Cysteine synthase B (EC 2.5.1.47) 0.49 GFF4748 Triosephosphate isomerase (EC 5.3.1.1) — —
Variovorax sp. OAS795 0.74 ABID97_RS07880 cysteine synthase CysM 0.45 ABID97_RS20510 triose-phosphate isomerase — —
Acidovorax sp. GW101-3H11 0.73 Ac3H11_644 Cysteine synthase B (EC 2.5.1.47) 0.51 Ac3H11_1454 Triosephosphate isomerase (EC 5.3.1.1) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF709 Cysteine synthase B (EC 2.5.1.47) 0.48 GFF3679 Triosephosphate isomerase (EC 5.3.1.1) — —
Marinobacter adhaerens HP15 0.69 HP15_789 cysteine synthase B 0.43 HP15_3071 triosephosphate isomerase — —
Pseudomonas putida KT2440 0.68 PP_1654 cysteine synthase B 0.42 PP_4715 triose phosphate isomerase — —
Pseudomonas simiae WCS417 0.68 PS417_20160 cysteine synthase 0.41 PS417_24000 triosephosphate isomerase — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_02720 cysteine synthase 0.43 AO353_05590 triosephosphate isomerase — —
Pseudomonas stutzeri RCH2 0.67 Psest_1638 cysteine synthase B 0.38 Psest_0975 triosephosphate isomerase — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_2032 Cysteine synthase B (EC 2.5.1.47) 0.41 PfGW456L13_5091 Triosephosphate isomerase (EC 5.3.1.1) — —
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3506 Cysteine synthase B (EC 2.5.1.47) 0.43 Pf1N1B4_1164 Triosephosphate isomerase (EC 5.3.1.1) — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_19050 cysteine synthase 0.42 AO356_07440 triosephosphate isomerase — —
Pseudomonas sp. RS175 0.67 PFR28_03225 Cysteine synthase B 0.42 PFR28_00085 Triosephosphate isomerase — —
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5721 Cysteine synthase B (EC 2.5.1.47) 0.42 Pf6N2E2_3356 Triosephosphate isomerase (EC 5.3.1.1) — —
Pseudomonas sp. S08-1 0.67 OH686_18950 cysteine synthase B 0.41 OH686_17115 triose-phosphate isomerase — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS22105 cysteine synthase CysM 0.41 PFLU_RS25840 triose-phosphate isomerase — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS22105 cysteine synthase CysM 0.41 PFLU_RS25840 triose-phosphate isomerase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3697 cysteine synthase 0.42 Psyr_4184 triosephosphate isomerase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3697 cysteine synthase 0.42 Psyr_4184 triosephosphate isomerase — —
Castellaniella sp019104865 MT123 0.66 ABCV34_RS07055 cysteine synthase CysM 0.51 ABCV34_RS01320 triose-phosphate isomerase — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_02845 cysteine synthase CysM 0.39 CSW01_13490 triose-phosphate isomerase — —
Acinetobacter radioresistens SK82 0.61 MPMX26_00536 Cysteine synthase B 0.32 MPMX26_00247 Triosephosphate isomerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2055 Cysteine synthase (EC 2.5.1.47) 0.41 GFF2302 Triosephosphate isomerase (EC 5.3.1.1) — —
Klebsiella michiganensis M5al 0.61 BWI76_RS20685 cysteine synthase B 0.40 BWI76_RS27465 triose-phosphate isomerase — —
Rahnella sp. WP5 0.60 EX31_RS20205 cysteine synthase CysM 0.46 EX31_RS14300 triose-phosphate isomerase — —
Escherichia fergusonii Becca 0.60 EFB2_01456 Cysteine synthase B 0.41 EFB2_04699 Triosephosphate isomerase — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS13900 cysteine synthase B 0.41 ECOLIN_RS22575 triose-phosphate isomerase — —
Escherichia coli ECOR38 0.60 HEPCGN_21345 cysM cysteine synthase B 0.41 HEPCGN_12455 tpiA triose-phosphate isomerase — —
Escherichia coli BW25113 0.60 b2421 cysM cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) 0.41 b3919 tpiA triosephosphate isomerase (NCBI) — —
Escherichia coli ECOR27 0.60 NOLOHH_13850 cysM cysteine synthase B 0.41 NOLOHH_05945 tpiA triose-phosphate isomerase — —
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0209 cysteine synthase B 0.42 EX28DRAFT_4394 triosephosphate isomerase (EC 5.3.1.1) — —
Escherichia coli ECRC62 0.60 BNILDI_12715 cysM cysteine synthase B 0.41 BNILDI_05585 tpiA triose-phosphate isomerase — —
Enterobacter sp. TBS_079 0.60 MPMX20_03313 Cysteine synthase B 0.42 MPMX20_04548 Triosephosphate isomerase — —
Escherichia coli BL21 0.60 ECD_02321 cysteine synthase B (O-acetylserine sulfhydrolase B) 0.41 ECD_03804 triosephosphate isomerase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_01302 Cysteine synthase B 0.41 OHPLBJKB_04132 Triosephosphate isomerase — —
Dickeya dadantii 3937 0.60 DDA3937_RS04425 cysteine synthase CysM 0.45 DDA3937_RS00865 triose-phosphate isomerase low > 74
Dickeya dianthicola ME23 0.59 DZA65_RS04315 cysteine synthase CysM 0.45 DZA65_RS21555 triose-phosphate isomerase — —
Shewanella sp. ANA-3 0.59 Shewana3_3188 cysM cysteine synthase B (RefSeq) 0.41 Shewana3_1026 triosephosphate isomerase (RefSeq) — —
Escherichia coli ECRC98 0.59 JDDGAC_26120 cysM cysteine synthase B 0.41 JDDGAC_17435 tpiA triose-phosphate isomerase — —
Escherichia coli ECRC100 0.59 OKFHMN_22170 cysM cysteine synthase B 0.41 OKFHMN_13810 tpiA triose-phosphate isomerase — —
Escherichia coli ECRC102 0.59 NIAGMN_19940 cysM cysteine synthase B 0.41 NIAGMN_11565 tpiA triose-phosphate isomerase — —
Escherichia coli ECRC99 0.59 KEDOAH_06050 cysM cysteine synthase B 0.41 KEDOAH_14350 tpiA triose-phosphate isomerase — —
Escherichia coli ECRC101 0.59 MCAODC_12700 cysM cysteine synthase B 0.41 MCAODC_04310 tpiA triose-phosphate isomerase — —
Shewanella oneidensis MR-1 0.59 SO3598 cysM cysteine synthase B (NCBI ptt file) 0.41 SO1200 tpiA triosephosphate isomerase (NCBI ptt file) — —
Dickeya dianthicola 67-19 0.59 HGI48_RS04400 cysteine synthase CysM 0.45 HGI48_RS20510 triose-phosphate isomerase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_08940 cysteine synthase B 0.42 CA264_14890 triose-phosphate isomerase low > 74
Pectobacterium carotovorum WPP14 0.57 HER17_RS17210 cysteine synthase CysM 0.44 HER17_RS00800 triose-phosphate isomerase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.56 Echvi_0220 cysteine synthase B 0.44 Echvi_1196 triosephosphate isomerase — —
Erwinia tracheiphila SCR3 0.55 LU632_RS06675 cysM cysteine synthase CysM 0.43 LU632_RS19730 tpiA triose-phosphate isomerase — —
Pedobacter sp. GW460-11-11-14-LB5 0.55 CA265_RS10150 cysteine synthase B 0.42 CA265_RS10795 triose-phosphate isomerase — —
Serratia liquefaciens MT49 0.55 IAI46_18490 cysteine synthase CysM 0.42 IAI46_24635 triose-phosphate isomerase — —
Pantoea sp. MT58 0.54 IAI47_05405 cysteine synthase CysM 0.42 IAI47_00795 triose-phosphate isomerase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.54 ABZR88_RS13695 cysteine synthase CysM 0.44 ABZR88_RS14455 triose-phosphate isomerase — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT1852 cysteine synthase A (NCBI ptt file) 0.44 BT3929 triosephosphate isomerase (NCBI ptt file) — —
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU0663 cysK cysteine synthase A (TIGR) 0.34 DVU1677 tpiA triosephosphate isomerase (TIGR) — —
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS08075 cysteine synthase A 0.42 HMPREF1078_RS12745 triose-phosphate isomerase — —
Bacteroides ovatus ATCC 8483 0.37 BACOVA_04596 cysteine synthase A 0.44 BACOVA_01155 triose-phosphate isomerase — —
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS14120 cysteine synthase A 0.43 HMPREF1181_RS06595 triose-phosphate isomerase — —
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS02875 cysteine synthase A 0.43 HMPREF1058_RS08270 triose-phosphate isomerase — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1247.1 Cysteine synthase (EC 2.5.1.47) 0.49 Xcc-8004.1979.1 Triosephosphate isomerase (EC 5.3.1.1) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS10255 cysteine synthase A 0.37 A4249_RS06145 triose-phosphate isomerase — —
Lysobacter sp. OAE881 0.35 ABIE51_RS16995 cysteine synthase A 0.40 ABIE51_RS08295 triose-phosphate isomerase — —
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_B2664 srpG cysteine synthase 0.37 Synpcc7942_1261 tpiA triosephosphate isomerase — —
Mycobacterium tuberculosis H37Rv 0.35 Rv2334 Cysteine synthase a CysK1 (O-acetylserine sulfhydrylase A) (O-acetylserine (thiol)-lyase A) (CSASE A) 0.33 Rv1438 Probable triosephosphate isomerase Tpi (TIM) — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00680 cysteine synthase A 0.45 LRK55_RS17720 triose-phosphate isomerase — —
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00905 cysteine synthase A 0.46 LRK54_RS17500 triose-phosphate isomerase — —
Rhodospirillum rubrum S1H 0.34 Rru_A3794 Cysteine synthase (NCBI) 0.35 Rru_A1889 Triosephosphate isomerase (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_2658 cysteine synthase (RefSeq) 0.30 DvMF_0348 Triose-phosphate isomerase (RefSeq) — —
Sinorhizobium meliloti 1021 0.33 SMc00421 O-acetylserine sulfhydrylase A 0.37 SMc01023 triosephosphate isomerase low > 103
Rhizobium sp. OAE497 0.32 ABIE40_RS01415 cysteine synthase A 0.35 ABIE40_RS09645 triose-phosphate isomerase low > 107
Magnetospirillum magneticum AMB-1 0.32 AMB_RS01005 cysteine synthase A 0.37 AMB_RS09205 triose-phosphate isomerase — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_1208 cystathionine beta-synthase (acetylserine-dependent) (EC 4.2.1.-) 0.48 B158DRAFT_0649 triosephosphate isomerase (EC 5.3.1.1) — —
Alteromonas macleodii MIT1002 0.31 MIT1002_02237 Cysteine synthase A 0.46 MIT1002_01868 Triosephosphate isomerase — —
Agrobacterium fabrum C58 0.31 Atu0312 cysteine synthase 0.35 Atu1620 triosephosphate isomerase low > 89
Shewanella loihica PV-4 0.31 Shew_2382 cysteine synthase A (RefSeq) 0.40 Shew_2831 Triose-phosphate isomerase (RefSeq) — —
Shewanella amazonensis SB2B 0.30 Sama_1508 cysteine synthase A (RefSeq) 0.40 Sama_0957 Triose-phosphate isomerase (RefSeq) — —
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03740 cysteine synthase 0.33 CCNA_01970 triosephosphate isomerase — —
Caulobacter crescentus NA1000 0.30 CCNA_03740 cysteine synthase 0.33 CCNA_01970 triosephosphate isomerase — —
Azospirillum sp. SherDot2 0.30 MPMX19_00237 Cysteine synthase 0.35 MPMX19_01241 Triosephosphate isomerase — —
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3644 cysteine synthase A 0.32 Ga0059261_0254 triosephosphate isomerase (EC 5.3.1.1) — —
Bifidobacterium breve UCC2003 0.29 BBR_RS13140 cysteine synthase 0.34 BBR_RS15540 triose-phosphate isomerase — —
Fusobacterium nucleatum SB010 0.27 HUW76_04155 cysteine synthase A 0.40 HUW76_08545 triose-phosphate isomerase — —
Dinoroseobacter shibae DFL-12 0.25 Dshi_0891 cysteine synthase A (RefSeq) 0.33 Dshi_2078 Triose-phosphate isomerase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.25 PGA1_c13950 cysteine synthase CysK 0.37 PGA1_c20650 triosephosphate isomerase TpiA — —

Not shown: 3 genomes with orthologs for BPHYT_RS14845 only; 3 genomes with orthologs for BPHYT_RS06610 only