| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu1677 | | queuine tRNA-ribosyltransferase | 1.0 | Atu4617 | | dTDP-D-glucose-4,6-dehydratase | 0.37 | 19 |
| Rhizobium sp. OAE497 | 0.90 | ABIE40_RS09435 | | tRNA guanosine(34) transglycosylase Tgt | 0.79 | ABIE40_RS08670 | | dTDP-glucose 4,6-dehydratase | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.84 | SMc01206 | | queuine tRNA-ribosyltransferase | 0.57 | SM_b21326 | | dTDP-D-glucose 4,6-dehydratase | low | > 103 |
| Bosea sp. OAE506 | 0.70 | ABIE41_RS18290 | | tRNA guanosine(34) transglycosylase Tgt | 0.65 | ABIE41_RS02850 | | dTDP-glucose 4,6-dehydratase | low | > 77 |
| Dinoroseobacter shibae DFL-12 | 0.64 | Dshi_2346 | | queuine tRNA-ribosyltransferase (RefSeq) | 0.61 | Dshi_4115 | | dTDP-glucose 4,6-dehydratase (RefSeq) | low | > 64 |
| Rhodopseudomonas palustris CGA009 | 0.64 | TX73_013485 | | tRNA guanosine(34) transglycosylase Tgt | 0.18 | TX73_020345 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Phaeobacter inhibens DSM 17395 | 0.63 | PGA1_c20570 | | queuine tRNA-ribosyltransferase Tgt | 0.59 | PGA1_65p00240 | | dTDP-glucose 4,6-dehydratase RffG | low | > 62 |
| Rhodospirillum rubrum S1H | 0.61 | Rru_A0280 | | Queuine tRNA-ribosyltransferase (NCBI) | 0.67 | Rru_B0050 | | dTDP-glucose 4,6-dehydratase (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.60 | AMB_RS03090 | | tRNA guanosine(34) transglycosylase Tgt | 0.58 | AMB_RS00295 | | dTDP-glucose 4,6-dehydratase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.58 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.67 | CCNA_03744 | | dTDP-glucose 4,6-dehydratase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.58 | CCNA_01659 | | queuine tRNA-ribosyltransferase | 0.67 | CCNA_03744 | | dTDP-glucose 4,6-dehydratase | low | > 66 |
| Azospirillum sp. SherDot2 | 0.58 | MPMX19_01697 | | Queuine tRNA-ribosyltransferase | 0.66 | MPMX19_06725 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Azospirillum brasilense Sp245 | 0.57 | AZOBR_RS06295 | | queuine tRNA-ribosyltransferase | 0.60 | AZOBR_RS33415 | | dTDP-glucose 4 6-dehydratase | low | > 97 |
| Sphingomonas koreensis DSMZ 15582 | 0.52 | Ga0059261_1017 | | tRNA-guanine transglycosylase | 0.56 | Ga0059261_3099 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 68 |
| Dickeya dianthicola ME23 | 0.51 | DZA65_RS05855 | | tRNA guanosine(34) transglycosylase Tgt | 0.68 | DZA65_RS07110 | | dTDP-glucose 4,6-dehydratase | 0.65 | 26 |
| Dickeya dianthicola 67-19 | 0.51 | HGI48_RS05530 | | tRNA guanosine(34) transglycosylase Tgt | 0.68 | HGI48_RS06755 | | dTDP-glucose 4,6-dehydratase | low | > 71 |
| Dickeya dadantii 3937 | 0.51 | DDA3937_RS05470 | | tRNA guanosine(34) transglycosylase Tgt | 0.68 | DDA3937_RS06735 | | dTDP-glucose 4,6-dehydratase | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_10000 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.55 | OKGIIK_01175 | rfbB | dTDP-glucose 4,6-dehydratase | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.50 | ABZR86_RS09540 | | tRNA guanosine(34) transglycosylase Tgt | 0.56 | ABZR86_RS18735 | | dTDP-glucose 4,6-dehydratase | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.50 | HSERO_RS06175 | | queuine tRNA-ribosyltransferase | 0.53 | HSERO_RS22050 | | spore coat protein | — | — |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_1242 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.67 | Psest_4262 | | dTDP-glucose 4,6-dehydratase | — | — |
| Alteromonas macleodii MIT1002 | 0.50 | MIT1002_02813 | | Queuine tRNA-ribosyltransferase | 0.64 | MIT1002_03557 | | dTDP-glucose 4,6-dehydratase | — | — |
| Marinobacter adhaerens HP15 | 0.50 | HP15_1479 | | queuine tRNA-ribosyltransferase | 0.66 | HP15_p187g47 | | dTDP-glucose 4,6-dehydratase | low | > 73 |
| Rhodanobacter denitrificans FW104-10B01 | 0.50 | LRK54_RS03130 | | tRNA guanosine(34) transglycosylase Tgt | 0.55 | LRK54_RS05665 | | dTDP-glucose 4,6-dehydratase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.50 | LRK55_RS02880 | | tRNA guanosine(34) transglycosylase Tgt | 0.55 | LRK55_RS05420 | | dTDP-glucose 4,6-dehydratase | low | > 63 |
| Serratia liquefaciens MT49 | 0.50 | IAI46_04840 | | tRNA guanosine(34) transglycosylase Tgt | 0.67 | IAI46_00610 | | dTDP-glucose 4,6-dehydratase | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS15990 | | tRNA guanosine(34) transglycosylase Tgt | 0.67 | HER17_RS01165 | | dTDP-glucose 4,6-dehydratase | — | — |
| Rahnella sp. WP5 | 0.50 | EX31_RS22095 | | tRNA guanosine(34) transglycosylase Tgt | 0.67 | EX31_RS11515 | | dTDP-glucose 4,6-dehydratase | — | — |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_2565 | | tRNA-guanine transglycosylase | 0.62 | EX28DRAFT_0515 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Enterobacter sp. TBS_079 | 0.50 | MPMX20_00997 | | Queuine tRNA-ribosyltransferase | 0.63 | MPMX20_03013 | | dTDP-glucose 4,6-dehydratase | 0.47 | 3 |
| Klebsiella michiganensis M5al | 0.49 | BWI76_RS06300 | | tRNA guanosine(34) transglycosylase Tgt | 0.61 | BWI76_RS19065 | | dTDP-glucose 4,6-dehydratase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.49 | GFF4305 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.66 | GFF2885 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 78 |
| Pantoea sp. MT58 | 0.49 | IAI47_14805 | | tRNA guanosine(34) transglycosylase Tgt | 0.64 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | — | — |
| Shewanella sp. ANA-3 | 0.49 | Shewana3_1435 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.66 | Shewana3_1379 | | dTDP-glucose 4,6 dehydratase (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.49 | Sama_2193 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.57 | Sama_2242 | | dTDP-glucose 4,6-dehydratase (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.49 | Shew_2337 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.66 | Shew_1401 | | dTDP-glucose 4,6 dehydratase (RefSeq) | low | > 60 |
| Fusobacterium nucleatum SB010 | 0.49 | HUW76_09025 | | tRNA guanosine(34) transglycosylase Tgt | 0.43 | HUW76_01440 | | dTDP-glucose 4,6-dehydratase | — | — |
| Lysobacter sp. OAE881 | 0.49 | ABIE51_RS15020 | | tRNA guanosine(34) transglycosylase Tgt | 0.52 | ABIE51_RS15620 | | dTDP-glucose 4,6-dehydratase | low | > 62 |
| Pseudomonas sp. S08-1 | 0.49 | OH686_17430 | | tRNA-guanine transglycosylase | 0.65 | OH686_14380 | | dTDP-glucose 4,6-dehydratase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS17400 | | queuine tRNA-ribosyltransferase | 0.57 | RR42_RS15840 | | spore coat protein | — | — |
| Shewanella oneidensis MR-1 | 0.49 | SO3113 | tgt | queuine tRNA-ribosyltransferase (NCBI ptt file) | 0.65 | SO3188 | rfbB | dTDP-glucose 4,6-dehydratase (NCBI ptt file) | low | > 76 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.65 | Psyr_4935 | | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECRC102 | 0.49 | NIAGMN_06560 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.65 | NIAGMN_12315 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli BL21 | 0.49 | ECD_00354 | | tRNA-guanine transglycosylase | 0.65 | ECD_03666 | | dTDP-glucose 4,6-dehydratase | low | > 60 |
| Escherichia coli ECRC101 | 0.49 | OKFHMN_08505 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.65 | OKFHMN_14560 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECOR27 | 0.49 | NOLOHH_01440 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.65 | NOLOHH_06695 | rffG | dTDP-glucose 4,6-dehydratase | low | > 57 |
| Desulfovibrio vulgaris Miyazaki F | 0.49 | DvMF_2757 | tgt | queuine tRNA-ribosyltransferase (RefSeq) | 0.43 | DvMF_0141 | | dTDP-glucose 4,6-dehydratase (RefSeq) | — | — |
| Escherichia coli BW25113 | 0.49 | b0406 | tgt | queuine tRNA-ribosyltransferase (NCBI) | 0.65 | b3788 | rffG | dTDP-glucose 4,6-dehydratase (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.49 | ECOLIN_RS02445 | | tRNA guanosine(34) transglycosylase Tgt | 0.65 | ECOLIN_RS21745 | | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECRC99 | 0.49 | KEDOAH_19460 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.65 | KEDOAH_13590 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli ECOR38 | 0.49 | HEPCGN_07145 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.65 | HEPCGN_13270 | rffG | dTDP-glucose 4,6-dehydratase | low | > 85 |
| Escherichia coli ECRC101 | 0.49 | MCAODC_27730 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.65 | MCAODC_05065 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_1228 | | tRNA-guanine transglycosylase | 0.65 | Psyr_4935 | | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia fergusonii Becca | 0.49 | EFB2_03651 | | Queuine tRNA-ribosyltransferase | 0.65 | EFB2_04851 | | dTDP-glucose 4,6-dehydratase 2 | low | > 86 |
| Escherichia coli ECRC62 | 0.49 | BNILDI_22855 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.65 | BNILDI_04830 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.49 | OHPLBJKB_03270 | | Queuine tRNA-ribosyltransferase | 0.65 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | low | > 73 |
| Erwinia tracheiphila SCR3 | 0.49 | LU632_RS18500 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.63 | LU632_RS08850 | rfbB | dTDP-glucose 4,6-dehydratase | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.49 | Xcc-8004.2168.1 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.56 | Xcc-8004.4486.1 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 74 |
| Escherichia coli ECRC98 | 0.49 | JDDGAC_12160 | tgt | tRNA guanosine(34) transglycosylase Tgt | 0.65 | JDDGAC_18185 | rffG | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas putida KT2440 | 0.48 | PP_0833 | | queuine tRNA-ribosyltransferase | 0.58 | PP_1785 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_3006 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.67 | Pf1N1B4_5939 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_3198 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.66 | Pf6N2E2_3878 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_06690 | | queuine tRNA-ribosyltransferase | 0.67 | AO356_10040 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_4882 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.61 | PfGW456L13_2200 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Acinetobacter radioresistens SK82 | 0.48 | MPMX26_00438 | | Queuine tRNA-ribosyltransferase | 0.61 | MPMX26_00450 | | dTDP-glucose 4,6-dehydratase 2 | low | > 36 |
| Pseudomonas sp. RS175 | 0.48 | PFR28_00277 | | Queuine tRNA-ribosyltransferase | 0.65 | PFR28_04894 | | dTDP-glucose 4,6-dehydratase 2 | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_15790 | | queuine tRNA-ribosyltransferase | 0.67 | AO353_11885 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.66 | PFLU_RS01425 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS24900 | | tRNA guanosine(34) transglycosylase Tgt | 0.66 | PFLU_RS01425 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pseudomonas simiae WCS417 | 0.48 | PS417_23245 | | queuine tRNA-ribosyltransferase | 0.67 | PS417_01330 | | dTDP-glucose 4,6-dehydratase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.48 | DVU0726 | tgt | queuine tRNA-ribosyltransferase (TIGR) | 0.41 | DVU1364 | rfbB | dTDP-glucose 4,6-dehydratase (TIGR) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_04670 | | tRNA-guanine transglycosylase | 0.59 | H281DRAFT_04822 | | dTDP-glucose 4,6-dehydratase | — | — |
| Dechlorosoma suillum PS | 0.47 | Dsui_3323 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.55 | Dsui_1948 | | dTDP-glucose 4,6-dehydratase | — | — |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS03410 | | queuine tRNA-ribosyltransferase | 0.59 | BPHYT_RS04265 | | dTDP-glucose 4,6-dehydratase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS26640 | | tRNA guanosine(34) transglycosylase Tgt | 0.58 | QEN71_RS25755 | | dTDP-glucose 4,6-dehydratase | — | — |
| Acidovorax sp. GW101-3H11 | 0.47 | Ac3H11_861 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.55 | Ac3H11_1880 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS15365 | | tRNA guanosine(34) transglycosylase Tgt | 0.65 | ABCV34_RS02410 | | dTDP-glucose 4,6-dehydratase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.46 | GFF2798 | | tRNA-guanine transglycosylase (EC 2.4.2.29) | 0.56 | GFF1837 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Synechococcus elongatus PCC 7942 | 0.46 | Synpcc7942_0455 | tgt | queuine tRNA-ribosyltransferase | 0.62 | Synpcc7942_2100 | rfbB | dTDP-glucose 4,6-dehydratase | low | > 38 |
| Ralstonia sp. UNC404CL21Col | 0.46 | ABZR87_RS01280 | | tRNA guanosine(34) transglycosylase Tgt | 0.59 | ABZR87_RS08645 | | dTDP-glucose 4,6-dehydratase | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS13575 | | tRNA guanosine(34) transglycosylase Tgt | 0.59 | RS_RS03430 | | dTDP-glucose 4,6-dehydratase | — | — |
| Variovorax sp. SCN45 | 0.45 | GFF5534 | | Queuine tRNA-ribosyltransferase (EC 2.4.2.29) | 0.57 | GFF6882 | | dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) | — | — |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS01595 | | tRNA guanosine(34) transglycosylase Tgt | 0.57 | ABID97_RS05660 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS07940 | | tRNA guanosine(34) transglycosylase Tgt | 0.60 | UW163_RS00920 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS05685 | | tRNA guanosine(34) transglycosylase Tgt | 0.60 | RALBFv3_RS12645 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.44 | CA265_RS13030 | | tRNA guanosine(34) transglycosylase Tgt | 0.52 | CA265_RS19340 | | dTDP-glucose 4,6-dehydratase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.44 | HMPREF1078_RS01080 | | tRNA guanosine(34) transglycosylase Tgt | 0.48 | HMPREF1078_RS00705 | | dTDP-glucose 4,6-dehydratase | — | — |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS11615 | | tRNA guanosine(34) transglycosylase Tgt | 0.60 | RPSI07_RS20615 | | dTDP-glucose 4,6-dehydratase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.44 | Echvi_2049 | | tRNA-guanine transglycosylase, queuosine-34-forming | 0.51 | Echvi_2329 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.44 | CA264_00655 | | tRNA-guanine(34) transglycosylase | 0.52 | CA264_17910 | | dTDP-glucose 4,6-dehydratase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.43 | ABZR88_RS13980 | | tRNA guanosine(34) transglycosylase Tgt | 0.54 | ABZR88_RS17425 | | dTDP-glucose 4,6-dehydratase | — | — |
| Bacteroides stercoris CC31F | 0.43 | HMPREF1181_RS14345 | | tRNA guanosine(34) transglycosylase Tgt | 0.46 | HMPREF1181_RS08020 | | dTDP-glucose 4,6-dehydratase | — | — |
| Phocaeicola dorei CL03T12C01 | 0.43 | ABI39_RS16515 | | tRNA guanosine(34) transglycosylase Tgt | 0.53 | ABI39_RS13370 | | dTDP-glucose 4,6-dehydratase | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.43 | HMPREF1058_RS01215 | | tRNA guanosine(34) transglycosylase Tgt | 0.47 | HMPREF1058_RS02350 | | dTDP-glucose 4,6-dehydratase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.41 | BACOVA_02570 | | tRNA-guanine transglycosylase | 0.49 | BACOVA_03743 | | dTDP-glucose 4,6-dehydratase | low | > 94 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.41 | BT0835 | | tRNA-guanine transglycosylase (NCBI ptt file) | 0.49 | BT0466 | | dTDP-glucose 4,6-dehydratase (NCBI ptt file) | — | — |
| Bifidobacterium breve UCC2003 | 0.34 | BBR_RS10715 | | tRNA-guanine(34) transglycosylase | 0.40 | BBR_RS19790 | | dTDP-glucose 4,6-dehydratase | — | — |
Not shown: 3 genomes with orthologs for Atu1677 only; 2 genomes with orthologs for Atu4617 only