Conservation of cofitness between Atu1463 and Atu3482 in Agrobacterium fabrum C58

96 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1463 glycine cleavage system component H 1.0 Atu3482 pantoate--beta-alanine ligase 0.76 4
Rhizobium sp. OAE497 0.85 ABIE40_RS09945 glycine cleavage system protein GcvH 0.67 ABIE40_RS09460 pantoate--beta-alanine ligase low > 107
Sinorhizobium meliloti 1021 0.82 SMc02048 glycine cleavage system protein H 0.72 SMc01880 pantoate--beta-alanine ligase low > 103
Phaeobacter inhibens DSM 17395 0.61 PGA1_c05560 glycine cleavage system protein GcvH 0.35 PGA1_c32040 pantothenate synthetase PanC — —
Azospirillum brasilense Sp245 0.61 AZOBR_RS10465 glycine cleavage system protein H 0.37 AZOBR_RS09715 pantoate--beta-alanine ligase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF5214 Glycine cleavage system H protein 0.32 GFF1220 Pantoate--beta-alanine ligase (EC 6.3.2.1) — —
Azospirillum sp. SherDot2 0.60 MPMX19_01030 Glycine cleavage system H protein 0.34 MPMX19_04465 Pantothenate synthetase low > 112
Variovorax sp. SCN45 0.59 GFF6477 Glycine cleavage system H protein 0.35 GFF2578 Pantoate--beta-alanine ligase (EC 6.3.2.1) — —
Sphingomonas koreensis DSMZ 15582 0.59 Ga0059261_3257 glycine cleavage system H protein 0.42 Ga0059261_2453 pantoate--beta-alanine ligase — —
Escherichia coli ECOR38 0.58 HEPCGN_18815 gcvH glycine cleavage system protein GcvH 0.39 HEPCGN_08380 panC pantoate--beta-alanine ligase low > 85
Variovorax sp. OAS795 0.58 ABID97_RS19650 glycine cleavage system protein GcvH 0.37 ABID97_RS07430 pantoate--beta-alanine ligase — —
Escherichia coli ECRC101 0.57 MCAODC_10045 gcvH glycine cleavage system protein GcvH 0.39 MCAODC_00920 panC pantoate--beta-alanine ligase — —
Escherichia coli ECRC62 0.57 BNILDI_09975 gcvH glycine cleavage system protein GcvH 0.39 BNILDI_08920 panC pantoate--beta-alanine ligase — —
Escherichia coli ECRC99 0.57 KEDOAH_08615 gcvH glycine cleavage system protein GcvH 0.39 KEDOAH_17750 panC pantoate--beta-alanine ligase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00811 Glycine cleavage system H protein 0.40 OHPLBJKB_03528 Pantothenate synthetase low > 73
Escherichia coli ECOR27 0.57 NOLOHH_11440 gcvH glycine cleavage system protein GcvH 0.39 NOLOHH_02750 panC pantoate--beta-alanine ligase low > 57
Escherichia coli ECRC101 0.57 OKFHMN_19525 gcvH glycine cleavage system protein GcvH 0.39 OKFHMN_10405 panC pantoate--beta-alanine ligase — —
Escherichia coli BW25113 0.57 b2904 gcvH glycine cleavage system protein H (NCBI) 0.40 b0133 panC pantoate--beta-alanine ligase (NCBI) low > 76
Escherichia coli ECRC98 0.57 JDDGAC_23165 gcvH glycine cleavage system protein GcvH 0.39 JDDGAC_14000 panC pantoate--beta-alanine ligase — —
Escherichia coli BL21 0.57 ECD_02736 glycine cleavage complex lipoylprotein 0.39 ECD_00132 pantothenate synthetase low > 60
Escherichia coli ECRC102 0.57 NIAGMN_17290 gcvH glycine cleavage system protein GcvH 0.39 NIAGMN_08255 panC pantoate--beta-alanine ligase — —
Escherichia fergusonii Becca 0.57 EFB2_00998 Glycine cleavage system H protein 0.40 EFB2_03911 Pantothenate synthetase low > 86
Rhodopseudomonas palustris CGA009 0.57 TX73_019930 glycine cleavage system protein GcvH 0.35 TX73_016310 pantoate--beta-alanine ligase — —
Acidovorax sp. GW101-3H11 0.57 Ac3H11_166 Glycine cleavage system H protein 0.34 Ac3H11_3840 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 79
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF3004 Glycine cleavage system H protein 0.39 GFF92 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 78
Brevundimonas sp. GW460-12-10-14-LB2 0.56 A4249_RS09330 glycine cleavage system protein GcvH 0.35 A4249_RS06825 pantoate--beta-alanine ligase — —
Magnetospirillum magneticum AMB-1 0.56 AMB_RS03930 glycine cleavage system protein H 0.40 AMB_RS22115 pantoate--beta-alanine ligase — —
Pantoea sp. MT58 0.56 IAI47_03770 glycine cleavage system protein GcvH 0.41 IAI47_15660 pantoate--beta-alanine ligase low > 76
Bosea sp. OAE506 0.55 ABIE41_RS22925 glycine cleavage system protein GcvH 0.35 ABIE41_RS14875 pantoate--beta-alanine ligase low > 77
Klebsiella michiganensis M5al 0.55 BWI76_RS23875 glycine cleavage system protein H 0.40 BWI76_RS04990 pantoate--beta-alanine ligase low > 92
Enterobacter sp. TBS_079 0.55 MPMX20_03763 Glycine cleavage system H protein 0.38 MPMX20_00826 Pantothenate synthetase low > 85
Pseudomonas sp. S08-1 0.54 OH686_11170 glycine cleavage system H protein 0.40 OH686_17240 pantoate--beta-alanine ligase — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_1869 glycine cleavage system H protein (EC 1.4.1.27) (from data) 0.43 PfGW456L13_1520 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 87
Caulobacter crescentus NA1000 0.54 CCNA_03464 glycine cleavage system H protein 0.36 CCNA_02247 pantoate-beta-alanine ligase — —
Shewanella amazonensis SB2B 0.54 Sama_2720 glycine cleavage system protein H (RefSeq) 0.39 Sama_0775 panC pantoate--beta-alanine ligase (RefSeq) — —
Acinetobacter radioresistens SK82 0.54 MPMX26_01479 Glycine cleavage system H protein 0.38 MPMX26_00546 Pantothenate synthetase — —
Bacteroides thetaiotaomicron VPI-5482 0.54 BT2519 putative glycine cleavage system H protein (NCBI ptt file) 0.38 BT4308 pantoate--beta-alanine ligase (NCBI ptt file) — —
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_03464 glycine cleavage system H protein 0.36 CCNA_02247 pantoate-beta-alanine ligase — —
Enterobacter asburiae PDN3 0.54 EX28DRAFT_2956 glycine cleavage system H protein 0.38 EX28DRAFT_3729 pantoate--beta-alanine ligase low > 76
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_620 Glycine cleavage system H protein 0.42 Pf1N1B4_2853 Pantoate--beta-alanine ligase (EC 6.3.2.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_5559 Glycine cleavage system H protein 0.43 Pf6N2E2_5152 Pantoate--beta-alanine ligase (EC 6.3.2.1) — —
Rhodospirillum rubrum S1H 0.54 Rru_A3050 Glycine cleavage H-protein (NCBI) 0.37 Rru_A3320 Cytidyltransferase-related (NCBI) — —
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS28910 glycine cleavage system protein GcvH 0.42 PFLU_RS25755 pantoate--beta-alanine ligase low > 109
Pectobacterium carotovorum WPP14 0.54 HER17_RS18000 glycine cleavage system protein GcvH 0.40 HER17_RS05555 pantoate--beta-alanine ligase 0.59 71
Pseudomonas fluorescens SBW25 0.54 PFLU_RS28910 glycine cleavage system protein GcvH 0.42 PFLU_RS25755 pantoate--beta-alanine ligase low > 109
Phocaeicola vulgatus CL09T03C04 0.54 HMPREF1058_RS12495 glycine cleavage system protein GcvH 0.36 HMPREF1058_RS18260 pantoate--beta-alanine ligase — —
Pseudomonas simiae WCS417 0.54 PS417_27250 glycine cleavage system protein H 0.43 PS417_23915 pantoate--beta-alanine ligase low > 88
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_0544 glycine cleavage system H protein 0.41 B158DRAFT_0062 pantoate--beta-alanine ligase — —
Shewanella sp. ANA-3 0.53 Shewana3_3500 glycine cleavage system protein H (RefSeq) 0.39 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq) — —
Phocaeicola dorei CL03T12C01 0.53 ABI39_RS04240 glycine cleavage system protein GcvH 0.36 ABI39_RS14555 pantoate--beta-alanine ligase — —
Shewanella oneidensis MR-1 0.53 SO0780 gcvH glycine cleavage system H protein (NCBI ptt file) 0.40 SO0869 panC pantoate--beta-alanine ligase (NCBI ptt file) — —
Shewanella loihica PV-4 0.53 Shew_3063 glycine cleavage system protein H (RefSeq) 0.38 Shew_3134 pantoate--beta-alanine ligase (RefSeq) — —
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_03495 glycine cleavage system protein H 0.43 AO353_14380 pantoate--beta-alanine ligase low > 101
Dechlorosoma suillum PS 0.53 Dsui_2736 glycine cleavage system H protein 0.36 Dsui_1470 pantoate--beta-alanine ligase — —
Alteromonas macleodii MIT1002 0.52 MIT1002_02972 Glycine cleavage system H protein 0.42 MIT1002_03695 Pantothenate synthetase — —
Bacteroides stercoris CC31F 0.52 HMPREF1181_RS00935 glycine cleavage system protein GcvH 0.39 HMPREF1181_RS06090 pantoate--beta-alanine ligase — —
Erwinia tracheiphila SCR3 0.52 LU632_RS05910 gcvH glycine cleavage system protein GcvH 0.39 LU632_RS20105 panC pantoate--beta-alanine ligase 0.52 40
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_13040 glycine cleavage system protein H 0.43 AO356_16055 pantoate--beta-alanine ligase — —
Pseudomonas sp. RS175 0.52 PFR28_03382 Glycine cleavage system H protein 0.43 PFR28_03722 Pantothenate synthetase — —
Bacteroides ovatus ATCC 8483 0.51 BACOVA_01614 glycine cleavage system H protein 0.39 BACOVA_05108 pantoate--beta-alanine ligase — —
Dickeya dianthicola 67-19 0.51 HGI48_RS03395 glycine cleavage system protein GcvH 0.35 HGI48_RS16075 pantoate--beta-alanine ligase 0.54 68
Dinoroseobacter shibae DFL-12 0.51 Dshi_2681 glycine cleavage system H protein (RefSeq) 0.37 Dshi_2952 pantoate--beta-alanine ligase (RefSeq) — —
Pseudomonas putida KT2440 0.51 PP_0989 glycine cleavage system H protein 1 0.44 PP_4700 pantothenate synthetase low > 96
Serratia liquefaciens MT49 0.51 IAI46_20855 glycine cleavage system protein GcvH 0.40 IAI46_21245 pantoate--beta-alanine ligase low > 86
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_0247 glycine cleavage system H protein 0.41 Psyr_0827 pantothenate synthetase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_0247 glycine cleavage system H protein 0.41 Psyr_0827 pantothenate synthetase low > 86
Dickeya dianthicola ME23 0.51 DZA65_RS03440 glycine cleavage system protein GcvH 0.37 DZA65_RS17160 pantoate--beta-alanine ligase low > 75
Rahnella sp. WP5 0.50 EX31_RS21515 glycine cleavage system protein GcvH 0.39 EX31_RS03285 pantoate--beta-alanine ligase low > 89
Desulfovibrio vulgaris Hildenborough JW710 0.50 DVU1426 gcvH glycine cleavage system H protein (TIGR) 0.39 DVU2448 panC pantoate--beta-alanine ligase (TIGR) low > 55
Pedobacter sp. GW460-11-11-14-LB5 0.50 CA265_RS18980 glycine cleavage system protein H 0.32 CA265_RS22700 pantoate--beta-alanine ligase — —
Marinobacter adhaerens HP15 0.50 HP15_459 glycine cleavage H-protein, subgroup 0.41 HP15_323 pantothenate synthetase — —
Pseudomonas stutzeri RCH2 0.49 Psest_0182 glycine cleavage system H protein 0.42 Psest_0995 pantoate--beta-alanine ligase — —
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS18880 glycine cleavage system protein GcvH 0.41 ABZR86_RS00820 pantoate--beta-alanine ligase — —
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_01310 gcvH glycine cleavage system protein GcvH 0.42 OKGIIK_03890 panC pantoate--beta-alanine ligase low > 52
Castellaniella sp019104865 MT123 0.46 ABCV34_RS08840 glycine cleavage system protein GcvH 0.34 ABCV34_RS14585 pantoate--beta-alanine ligase — —
Dickeya dadantii 3937 0.46 DDA3937_RS03250 glycine cleavage system protein GcvH 0.37 DDA3937_RS15960 pantoate--beta-alanine ligase low > 74
Pontibacter actiniarum KMM 6156, DSM 19842 0.46 CA264_14555 glycine cleavage system protein H 0.39 CA264_17615 pantoate--beta-alanine ligase — —
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_0225 glycine cleavage system protein H (RefSeq) 0.40 DvMF_2942 panC pantoate--beta-alanine ligase (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_02410 glycine cleavage system H protein 0.37 H281DRAFT_00150 pantothenate synthetase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.45 ABZR88_RS00300 glycine cleavage system protein GcvH 0.40 ABZR88_RS18500 pantoate--beta-alanine ligase — —
Paraburkholderia graminis OAS925 0.45 ABIE53_000237 glycine cleavage system H protein 0.35 ABIE53_001260 pantoate--beta-alanine ligase — —
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_15335 glycine cleavage system protein H 0.42 CSW01_03130 pantoate--beta-alanine ligase — —
Parabacteroides merdae CL09T00C40 0.45 HMPREF1078_RS05930 glycine cleavage system protein GcvH 0.41 HMPREF1078_RS14680 pantoate--beta-alanine ligase low > 61
Rhodanobacter denitrificans MT42 0.45 LRK55_RS05275 glycine cleavage system protein GcvH 0.41 LRK55_RS14835 pantoate--beta-alanine ligase low > 63
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS05505 glycine cleavage system protein GcvH 0.41 LRK54_RS15120 pantoate--beta-alanine ligase — —
Lysobacter sp. OAE881 0.45 ABIE51_RS16360 glycine cleavage system protein GcvH 0.38 ABIE51_RS08030 pantoate--beta-alanine ligase — —
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS19325 glycine cleavage system H protein 0.35 BPHYT_RS04925 pantothenate synthetase — —
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1568.1 Glycine cleavage system H protein 0.37 Xcc-8004.3051.1 Pantoate--beta-alanine ligase (EC 6.3.2.1) — —
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS29210 glycine cleavage system protein GcvH 0.36 QEN71_RS25065 pantoate--beta-alanine ligase — —
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS20065 glycine cleavage system protein H 0.35 RR42_RS16055 pantothenate synthetase — —
Ralstonia solanacearum GMI1000 0.42 RS_RS16505 glycine cleavage system protein H 0.38 RS_RS11985 pantoate--beta-alanine ligase — —
Mycobacterium tuberculosis H37Rv 0.42 Rv1826 Probable glycine cleavage system H protein GcvH 0.33 Rv3602c Pantoate--beta-alanine ligase PanC (pantothenate synthetase) (pantoate activating enzyme) — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS08655 glycine cleavage system protein H 0.37 RALBFv3_RS04435 pantoate--beta-alanine ligase — —
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS07915 glycine cleavage system protein H 0.35 HSERO_RS15520 pantoate--beta-alanine ligase — —
Ralstonia solanacearum UW163 0.41 UW163_RS04955 glycine cleavage system protein H 0.37 UW163_RS09235 pantoate--beta-alanine ligase — —
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS03930 glycine cleavage system protein GcvH 0.37 ABZR87_RS00030 pantoate--beta-alanine ligase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS08580 glycine cleavage system protein H 0.37 RPSI07_RS12935 pantoate--beta-alanine ligase — —

Not shown: 4 genomes with orthologs for Atu1463 only; 0 genomes with orthologs for Atu3482 only