Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Dinoroseobacter shibae DFL-12 | 1.0 | Dshi_0083 | | 3-isopropylmalate dehydratase, small subunit (RefSeq) | 1.0 | Dshi_2639 | | carbamoyl-phosphate synthase, large subunit (RefSeq) | 0.71 | 10 |
Rhodospirillum rubrum S1H | 0.80 | Rru_A1190 | | 3-isopropylmalate dehydratase small subunit region (NCBI) | 0.66 | Rru_A2886 | | Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) | 0.74 | 15 |
Azospirillum sp. SherDot2 | 0.80 | MPMX19_00606 | | 3-isopropylmalate dehydratase small subunit 1 | 0.66 | MPMX19_02299 | | Carbamoyl-phosphate synthase large chain | — | — |
Magnetospirillum magneticum AMB-1 | 0.79 | AMB_RS20565 | | 3-isopropylmalate dehydratase small subunit | 0.67 | AMB_RS03605 | | carbamoyl-phosphate synthase large subunit | — | — |
Sinorhizobium meliloti 1021 | 0.79 | SMc03795 | | isopropylmalate isomerase small subunit | 0.64 | SMc01215 | | carbamoyl phosphate synthase large subunit | 0.67 | 89 |
Rhizobium sp. OAE497 | 0.79 | ABIE40_RS19040 | | 3-isopropylmalate dehydratase small subunit | 0.63 | ABIE40_RS12815 | | carbamoyl-phosphate synthase large subunit | — | — |
Phaeobacter inhibens DSM 17395 | 0.78 | PGA1_c29790 | | 3-isopropylmalate dehydratase small subunit | 0.81 | PGA1_c24560 | | carbamoyl-phosphate synthase large chain | 0.76 | 39 |
Azospirillum brasilense Sp245 | 0.77 | AZOBR_RS14135 | | isopropylmalate isomerase | 0.66 | AZOBR_RS12895 | | carbamoyl phosphate synthase large subunit | — | — |
Agrobacterium fabrum C58 | 0.77 | Atu2790 | | 3-isopropylmalate dehydratase, small subunit | 0.63 | Atu2178 | | carbamoylphosphate synthase large subunit | — | — |
Rhodopseudomonas palustris CGA009 | 0.75 | TX73_001215 | | 3-isopropylmalate dehydratase small subunit | 0.63 | TX73_021090 | | carbamoyl-phosphate synthase large subunit | — | — |
Bosea sp. OAE506 | 0.74 | ABIE41_RS11640 | | 3-isopropylmalate dehydratase small subunit | 0.62 | ABIE41_RS11910 | | carbamoyl-phosphate synthase large subunit | — | — |
Acinetobacter radioresistens SK82 | 0.61 | MPMX26_00346 | | 3-isopropylmalate dehydratase small subunit 1 | 0.59 | MPMX26_00766 | | Carbamoyl-phosphate synthase large chain | low | > 36 |
Pseudomonas stutzeri RCH2 | 0.60 | Psest_2590 | | 3-isopropylmalate dehydratase, small subunit | 0.59 | Psest_0968 | | carbamoyl-phosphate synthase, large subunit | — | — |
Marinobacter adhaerens HP15 | 0.60 | HP15_1833 | | isopropylmalate isomerase small subunit | 0.58 | HP15_3077 | | carbamoyl-phosphate synthase, large subunit | — | — |
Pseudomonas putida KT2440 | 0.59 | PP_1986 | | 3-isopropylmalate dehydratase small subunit | 0.59 | PP_4723 | | Carbamoyl-phosphate synthase large chain | 0.43 | 65 |
Ralstonia solanacearum IBSBF1503 | 0.59 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | 0.58 | RALBFv3_RS02190 | | carbamoyl-phosphate synthase large subunit | — | — |
Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_3947 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.58 | PfGW456L13_5099 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Ralstonia solanacearum UW163 | 0.59 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | 0.58 | UW163_RS15500 | | carbamoyl-phosphate synthase large subunit | — | — |
Variovorax sp. OAS795 | 0.59 | ABID97_RS08460 | | 3-isopropylmalate dehydratase small subunit | 0.57 | ABID97_RS17080 | | carbamoyl-phosphate synthase large subunit | — | — |
Pseudomonas sp. S08-1 | 0.59 | OH686_04475 | | 3-isopropylmalate dehydratase small subunit | 0.58 | OH686_17080 | | Carbamoyl-phosphate synthase large chain | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.59 | Pf1N1B4_14 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.59 | Pf1N1B4_1172 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Pseudomonas simiae WCS417 | 0.59 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.58 | PS417_24040 | | carbamoyl phosphate synthase large subunit | — | — |
Pseudomonas sp. RS175 | 0.59 | PFR28_02823 | | 3-isopropylmalate dehydratase small subunit 1 | 0.58 | PFR28_00077 | | Carbamoyl-phosphate synthase large chain | — | — |
Dechlorosoma suillum PS | 0.59 | Dsui_3199 | | 3-isopropylmalate dehydratase, small subunit | 0.58 | Dsui_3064 | | carbamoyl-phosphate synthase, large subunit | — | — |
Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | 0.57 | BPHYT_RS14190 | | carbamoyl phosphate synthase large subunit | 0.59 | 57 |
Ralstonia solanacearum PSI07 | 0.58 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | 0.58 | RPSI07_RS15255 | | carbamoyl-phosphate synthase large subunit | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.58 | AO353_20625 | | 3-isopropylmalate dehydratase | 0.59 | AO353_05630 | | carbamoyl phosphate synthase large subunit | — | — |
Caulobacter crescentus NA1000 Δfur | 0.58 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.65 | CCNA_02994 | | carbamoyl-phosphate synthase large chain | low | > 67 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.58 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.59 | Psyr_4191 | | carbamoyl-phosphate synthase large subunit | — | — |
Pseudomonas syringae pv. syringae B728a | 0.58 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.59 | Psyr_4191 | | carbamoyl-phosphate synthase large subunit | — | — |
Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.58 | PFLU_RS25880 | | carbamoyl-phosphate synthase large subunit | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.58 | PFLU_RS25880 | | carbamoyl-phosphate synthase large subunit | — | — |
Caulobacter crescentus NA1000 | 0.58 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.65 | CCNA_02994 | | carbamoyl-phosphate synthase large chain | — | — |
Kangiella aquimarina DSM 16071 | 0.58 | B158DRAFT_1320 | | 3-isopropylmalate dehydratase, small subunit | 0.57 | B158DRAFT_0616 | | carbamoyl-phosphate synthase, large subunit | — | — |
Ralstonia sp. UNC404CL21Col | 0.58 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | 0.58 | ABZR87_RS14140 | | carbamoyl-phosphate synthase large subunit | — | — |
Ralstonia solanacearum GMI1000 | 0.58 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | 0.58 | RS_RS07630 | | carbamoyl-phosphate synthase large chain | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_64 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.58 | Pf6N2E2_3364 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF3361 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.56 | GFF4898 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.58 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | 0.57 | H281DRAFT_04403 | | carbamoyl-phosphate synthase large subunit | — | — |
Variovorax sp. SCN45 | 0.58 | GFF3889 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.57 | GFF376 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.57 | QEN71_RS04780 | | carbamoyl-phosphate synthase large subunit | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_21405 | | 3-isopropylmalate dehydratase | 0.58 | AO356_07480 | | carbamoyl phosphate synthase large subunit | low | > 104 |
Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_1527 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.57 | Ac3H11_436 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Paraburkholderia graminis OAS925 | 0.57 | ABIE53_004803 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit | 0.57 | ABIE53_003004 | | carbamoyl-phosphate synthase large subunit | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.56 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.58 | Xcc-8004.2912.1 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | — | — |
Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS16505 | | 3-isopropylmalate dehydratase small subunit | 0.58 | HSERO_RS06925 | | carbamoyl phosphate synthase large subunit | — | — |
Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS14390 | | 3-isopropylmalate dehydratase | 0.58 | RR42_RS13510 | | carbamoyl phosphate synthase large subunit | — | — |
Castellaniella sp019104865 MT123 | 0.54 | ABCV34_RS04285 | | 3-isopropylmalate dehydratase small subunit | 0.58 | ABCV34_RS15510 | | carbamoyl-phosphate synthase large subunit | — | — |
Dickeya dianthicola ME23 | 0.53 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | 0.59 | DZA65_RS19380 | | carbamoyl-phosphate synthase large subunit | 0.75 | 27 |
Dickeya dadantii 3937 | 0.53 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | 0.59 | DDA3937_RS18305 | | carbamoyl-phosphate synthase large subunit | 0.75 | 11 |
Serratia liquefaciens MT49 | 0.53 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | 0.59 | IAI46_03195 | | carbamoyl-phosphate synthase large subunit | low | > 86 |
Dickeya dianthicola 67-19 | 0.53 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | 0.59 | HGI48_RS18240 | | carbamoyl-phosphate synthase large subunit | 0.80 | 8 |
Pantoea sp. MT58 | 0.52 | IAI47_16015 | | 3-isopropylmalate dehydratase small subunit | 0.59 | IAI47_16115 | | carbamoyl-phosphate synthase large subunit | 0.87 | 46 |
Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | 0.59 | CSW01_12100 | | carbamoyl-phosphate synthase large chain | low | > 62 |
Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS03070 | | 3-isopropylmalate dehydratase small subunit | 0.59 | HER17_RS02900 | | carbamoyl-phosphate synthase large subunit | 0.98 | 6 |
Shewanella loihica PV-4 | 0.51 | Shew_3469 | | isopropylmalate isomerase small subunit (RefSeq) | 0.58 | Shew_2838 | carB | carbamoyl phosphate synthase large subunit (RefSeq) | 0.88 | 54 |
Klebsiella michiganensis M5al | 0.51 | BWI76_RS04665 | | 3-isopropylmalate dehydratase small subunit | 0.59 | BWI76_RS04470 | | carbamoyl phosphate synthase large subunit | 0.60 | 78 |
Shewanella oneidensis MR-1 | 0.51 | SO4233 | leuD | 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) | 0.59 | SO1142 | carB | carbamoyl-phosphate synthase, large subunit (NCBI ptt file) | 0.89 | 56 |
Erwinia tracheiphila SCR3 | 0.50 | LU632_RS02865 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | LU632_RS02750 | carB | carbamoyl-phosphate synthase large subunit | 0.73 | 33 |
Escherichia coli ECRC62 | 0.50 | BNILDI_08535 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | BNILDI_08330 | carB | carbamoyl-phosphate synthase large subunit | — | — |
Escherichia coli ECOR27 | 0.50 | NOLOHH_03075 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | NOLOHH_03270 | carB | carbamoyl-phosphate synthase large subunit | low | > 57 |
Escherichia coli BW25113 | 0.50 | b0071 | leuD | isopropylmalate isomerase small subunit (NCBI) | 0.59 | b0033 | carB | carbamoyl-phosphate synthase large subunit (NCBI) | 0.84 | 58 |
Shewanella sp. ANA-3 | 0.50 | Shewana3_3758 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.59 | Shewana3_0968 | carB | carbamoyl phosphate synthase large subunit (RefSeq) | 0.91 | 38 |
Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_3667 | | 3-isopropylmalate dehydratase, small subunit | 0.59 | EX28DRAFT_3638 | | carbamoyl-phosphate synthase, large subunit | — | — |
Escherichia coli BL21 | 0.50 | ECD_00073 | | 3-isopropylmalate dehydratase small subunit | 0.59 | ECD_00037 | | carbamoyl-phosphate synthase large subunit | low | > 60 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_03586 | | 3-isopropylmalate dehydratase small subunit | 0.59 | OHPLBJKB_03624 | | Carbamoyl-phosphate synthase large chain | low | > 73 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF167 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.59 | GFF213 | | Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) | low | > 78 |
Shewanella amazonensis SB2B | 0.50 | Sama_0338 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.59 | Sama_2503 | carB | carbamoyl phosphate synthase large subunit (RefSeq) | low | > 62 |
Escherichia coli ECRC101 | 0.50 | OKFHMN_10730 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | OKFHMN_10940 | carB | carbamoyl-phosphate synthase large subunit | — | — |
Escherichia fergusonii Becca | 0.50 | EFB2_03974 | | 3-isopropylmalate dehydratase small subunit | 0.59 | EFB2_04012 | | Carbamoyl-phosphate synthase large chain | low | > 86 |
Escherichia coli ECRC98 | 0.50 | JDDGAC_14325 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | JDDGAC_14535 | carB | carbamoyl-phosphate synthase large subunit | — | — |
Escherichia coli ECOR38 | 0.50 | HEPCGN_08710 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | HEPCGN_08925 | carB | carbamoyl-phosphate synthase large subunit | low | > 85 |
Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS00385 | | 3-isopropylmalate dehydratase small subunit | 0.59 | ECOLIN_RS00180 | | carbamoyl-phosphate synthase large subunit | low | > 52 |
Escherichia coli ECRC102 | 0.50 | NIAGMN_08580 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | NIAGMN_08790 | carB | carbamoyl-phosphate synthase large subunit | — | — |
Escherichia coli ECRC99 | 0.50 | KEDOAH_17425 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | KEDOAH_17215 | carB | carbamoyl-phosphate synthase large subunit | — | — |
Escherichia coli ECRC101 | 0.50 | MCAODC_01245 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | MCAODC_01455 | carB | carbamoyl-phosphate synthase large subunit | — | — |
Rahnella sp. WP5 | 0.50 | EX31_RS03695 | | 3-isopropylmalate dehydratase small subunit | 0.59 | EX31_RS03830 | | carbamoyl-phosphate synthase large subunit | 0.96 | 21 |
Enterobacter sp. TBS_079 | 0.49 | MPMX20_00766 | | 3-isopropylmalate dehydratase small subunit 1 | 0.59 | MPMX20_00740 | | Carbamoyl-phosphate synthase large chain | 0.79 | 52 |
Sphingomonas koreensis DSMZ 15582 | 0.46 | Ga0059261_4225 | | 3-isopropylmalate dehydratase, small subunit | 0.64 | Ga0059261_0007 | | carbamoyl-phosphate synthase, large subunit | — | — |
Alteromonas macleodii MIT1002 | 0.46 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | 0.59 | MIT1002_01467 | | Carbamoyl-phosphate synthase large chain | 0.94 | 36 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.45 | CA264_09440 | | 3-isopropylmalate dehydratase small subunit | 0.40 | CA264_15430 | | carbamoyl phosphate synthase large subunit | low | > 74 |
Dyella japonica UNC79MFTsu3.2 | 0.43 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.59 | ABZR86_RS05600 | | carbamoyl-phosphate synthase large subunit | — | — |
Bacteroides stercoris CC31F | 0.43 | HMPREF1181_RS14140 | | 3-isopropylmalate dehydratase small subunit | 0.33 | HMPREF1181_RS16075 | | carbamoyl-phosphate synthase large subunit | low | > 56 |
Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS09970 | | 3-isopropylmalate dehydratase small subunit | 0.59 | LRK55_RS17855 | | carbamoyl-phosphate synthase large subunit | — | — |
Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_13590 | leuD | 3-isopropylmalate dehydratase small subunit | 0.59 | OKGIIK_07295 | carB | carbamoyl-phosphate synthase large subunit | low | > 52 |
Pedobacter sp. GW460-11-11-14-LB5 | 0.42 | CA265_RS15840 | | 3-isopropylmalate dehydratase small subunit | 0.40 | CA265_RS20080 | | carbamoyl phosphate synthase large subunit | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS10330 | | 3-isopropylmalate dehydratase small subunit | 0.59 | LRK54_RS18000 | | carbamoyl-phosphate synthase large subunit | — | — |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.42 | ABZR88_RS11600 | | 3-isopropylmalate dehydratase small subunit | 0.42 | ABZR88_RS20475 | | carbamoyl-phosphate synthase large subunit | — | — |
Parabacteroides merdae CL09T00C40 | 0.42 | HMPREF1078_RS16655 | | 3-isopropylmalate dehydratase small subunit | 0.33 | HMPREF1078_RS01300 | | carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | low | > 61 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.41 | Echvi_2060 | | 3-isopropylmalate dehydratase, small subunit | 0.40 | Echvi_0768 | | carbamoyl-phosphate synthase, large subunit | — | — |
Bifidobacterium breve UCC2003 | 0.40 | BBR_RS19625 | | 3-isopropylmalate dehydratase small subunit | 0.50 | BBR_RS13635 | | carbamoyl-phosphate synthase large subunit | 0.48 | 32 |
Lysobacter sp. OAE881 | 0.40 | ABIE51_RS17580 | | 3-isopropylmalate dehydratase small subunit | 0.58 | ABIE51_RS11615 | | carbamoyl-phosphate synthase large subunit | low | > 62 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.40 | A4249_RS10000 | | 3-isopropylmalate dehydratase small subunit | 0.64 | A4249_RS00725 | | carbamoyl-phosphate synthase large subunit | — | — |
Phocaeicola vulgatus CL09T03C04 | 0.40 | HMPREF1058_RS14555 | | 3-isopropylmalate dehydratase small subunit | 0.35 | HMPREF1058_RS06870 | | carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | low | > 67 |
Phocaeicola dorei CL03T12C01 | 0.39 | ABI39_RS10205 | | 3-isopropylmalate dehydratase small subunit | 0.34 | ABI39_RS20665 | | carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | low | > 72 |
Bacteroides ovatus ATCC 8483 | 0.39 | BACOVA_04602 | | 3-isopropylmalate dehydratase, small subunit | 0.34 | BACOVA_03752 | | carbamoyl-phosphate synthase, large subunit | low | > 94 |
Bacteroides thetaiotaomicron VPI-5482 | 0.39 | BT1859 | | 3-isopropylmalate dehydratase small subunit (NCBI ptt file) | 0.34 | BT0557 | | carbamyl phosphate synthetase (NCBI ptt file) | low | > 81 |
Mycobacterium tuberculosis H37Rv | 0.34 | Rv2987c | | Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | 0.50 | Rv1384 | | Probable carbamoyl-phosphate synthase large chain CarB (carbamoyl-phosphate synthetase ammonia chain) | — | — |
Not shown: 0 genomes with orthologs for Dshi_0083 only; 6 genomes with orthologs for Dshi_2639 only