| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BW25113 | 1.0 | b2616 | recN | recombination and repair protein (NCBI) | 1.0 | b2509 | xseA | exodeoxyribonuclease VII large subunit (NCBI) | 0.54 | 6 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_01091 | | DNA repair protein RecN | 0.99 | OHPLBJKB_01200 | | Exodeoxyribonuclease 7 large subunit | low | > 73 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_11620 | recN | DNA repair protein RecN | 0.99 | BNILDI_12205 | xseA | exodeoxyribonuclease VII large subunit | — | — |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_12815 | recN | DNA repair protein RecN | 0.99 | NOLOHH_13405 | xseA | exodeoxyribonuclease VII large subunit | low | > 57 |
| Escherichia coli BL21 | 1.00 | ECD_02504 | | recombination and repair protein | 1.00 | ECD_02401 | | exonuclease VII, large subunit | low | > 60 |
| Escherichia coli ECRC101 | 0.99 | MCAODC_11670 | recN | DNA repair protein RecN | 0.98 | MCAODC_12285 | xseA | exodeoxyribonuclease VII large subunit | — | — |
| Escherichia coli ECRC101 | 0.99 | OKFHMN_21145 | recN | DNA repair protein RecN | 0.98 | OKFHMN_21755 | xseA | exodeoxyribonuclease VII large subunit | — | — |
| Escherichia coli ECRC102 | 0.99 | NIAGMN_18915 | recN | DNA repair protein RecN | 0.98 | NIAGMN_19525 | xseA | exodeoxyribonuclease VII large subunit | — | — |
| Escherichia coli ECRC99 | 0.99 | KEDOAH_07075 | recN | DNA repair protein RecN | 0.98 | KEDOAH_06465 | xseA | exodeoxyribonuclease VII large subunit | — | — |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_20265 | recN | DNA repair protein RecN | 0.92 | HEPCGN_20895 | xseA | exodeoxyribonuclease VII large subunit | low | > 85 |
| Escherichia coli ECRC98 | 0.99 | JDDGAC_24810 | recN | DNA repair protein RecN | 0.98 | JDDGAC_25430 | xseA | exodeoxyribonuclease VII large subunit | — | — |
| Escherichia fergusonii Becca | 0.99 | EFB2_01277 | | DNA repair protein RecN | 0.90 | EFB2_01384 | | Exodeoxyribonuclease 7 large subunit | low | > 86 |
| Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS14775 | | DNA repair protein RecN | 0.91 | ECOLIN_RS14245 | | exodeoxyribonuclease VII large subunit | low | > 52 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.92 | GFF4162 | | DNA repair protein RecN | 0.87 | GFF2159 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | — | — |
| Enterobacter asburiae PDN3 | 0.86 | EX28DRAFT_2719 | | DNA repair protein RecN | 0.90 | EX28DRAFT_0138 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.85 | MPMX20_03486 | | DNA repair protein RecN | 0.89 | MPMX20_03383 | | Exodeoxyribonuclease 7 large subunit | low | > 85 |
| Klebsiella michiganensis M5al | 0.84 | BWI76_RS21560 | | DNA repair protein RecN | 0.87 | BWI76_RS21035 | | exodeoxyribonuclease VII large subunit | low | > 92 |
| Serratia liquefaciens MT49 | 0.77 | IAI46_19635 | | DNA repair protein RecN | 0.71 | IAI46_19215 | | exodeoxyribonuclease VII large subunit | low | > 86 |
| Pantoea sp. MT58 | 0.77 | IAI47_04810 | | DNA repair protein RecN | 0.70 | IAI47_05100 | | exodeoxyribonuclease VII large subunit | low | > 76 |
| Rahnella sp. WP5 | 0.75 | EX31_RS21760 | | DNA repair protein RecN | 0.72 | EX31_RS20455 | | exodeoxyribonuclease VII large subunit | low | > 89 |
| Dickeya dadantii 3937 | 0.73 | DDA3937_RS04325 | | DNA repair protein RecN | 0.73 | DDA3937_RS15425 | | exodeoxyribonuclease VII large subunit | low | > 74 |
| Erwinia tracheiphila SCR3 | 0.73 | LU632_RS16985 | recN | DNA repair protein RecN | 0.68 | LU632_RS17760 | xseA | exodeoxyribonuclease VII large subunit | low | > 74 |
| Dickeya dianthicola 67-19 | 0.72 | HGI48_RS04320 | | DNA repair protein RecN | 0.73 | HGI48_RS15540 | | exodeoxyribonuclease VII large subunit | low | > 71 |
| Dickeya dianthicola ME23 | 0.72 | DZA65_RS04235 | | DNA repair protein RecN | 0.73 | DZA65_RS16615 | | exodeoxyribonuclease VII large subunit | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS17420 | | DNA repair protein RecN | 0.71 | HER17_RS06150 | | exodeoxyribonuclease VII large subunit | low | > 75 |
| Shewanella oneidensis MR-1 | 0.55 | SO3462 | recN | DNA repair protein RecN (NCBI ptt file) | 0.47 | SO3294 | xseA | exodeoxyribonuclease VII, large subunit (NCBI ptt file) | 0.42 | 14 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_1104 | | recombination and repair protein (RefSeq) | 0.47 | Shewana3_1234 | xseA | exodeoxyribonuclease VII large subunit (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.54 | Sama_1026 | | recombination and repair protein (RefSeq) | 0.46 | Sama_2360 | xseA | exodeoxyribonuclease VII large subunit (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.53 | Shew_1196 | | recombination and repair protein (RefSeq) | 0.50 | Shew_1296 | xseA | exodeoxyribonuclease VII large subunit (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.53 | CSW01_04395 | | DNA repair protein RecN | 0.53 | CSW01_03975 | | exodeoxyribonuclease VII large subunit | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.43 | MIT1002_01443 | | Recombination protein N | 0.47 | MIT1002_02780 | | Exodeoxyribonuclease 7 large subunit | low | > 70 |
| Pseudomonas fluorescens GW456-L13 | 0.40 | PfGW456L13_5106 | | DNA repair protein RecN | 0.38 | PfGW456L13_4851 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | 0.32 | 42 |
| Marinobacter adhaerens HP15 | 0.40 | HP15_3084 | | DNA repair protein RecN | 0.44 | HP15_2052 | | exodeoxyribonuclease VII large subunit | low | > 73 |
| Pseudomonas fluorescens FW300-N1B4 | 0.39 | Pf1N1B4_1178 | | DNA repair protein RecN | 0.38 | Pf1N1B4_844 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | 0.22 | 78 |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_3370 | | DNA repair protein RecN | 0.39 | Pf6N2E2_3168 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | 0.44 | 15 |
| Pseudomonas sp. S08-1 | 0.39 | OH686_17050 | | DNA repair protein RecN | 0.37 | OH686_17580 | | exodeoxyribonuclease VII, large subunit | low | > 80 |
| Pseudomonas simiae WCS417 | 0.39 | PS417_24070 | | recombination and repair protein | 0.39 | PS417_23095 | | exodeoxyribonuclease | low | > 88 |
| Pseudomonas sp. RS175 | 0.39 | PFR28_00071 | | DNA repair protein RecN | 0.39 | PFR28_00307 | | Exodeoxyribonuclease 7 large subunit | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.38 | PFLU_RS25910 | | DNA repair protein RecN | 0.39 | PFLU_RS24755 | | exodeoxyribonuclease VII large subunit | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.38 | PFLU_RS25910 | | DNA repair protein RecN | 0.39 | PFLU_RS24755 | | exodeoxyribonuclease VII large subunit | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.38 | AO356_07510 | | DNA repair protein RecN | 0.39 | AO356_06540 | | exodeoxyribonuclease | 0.52 | 15 |
| Pseudomonas fluorescens FW300-N2E3 | 0.38 | AO353_05660 | | DNA repair protein RecN | 0.38 | AO353_15935 | | exodeoxyribonuclease | 0.40 | 25 |
| Pseudomonas syringae pv. syringae B728a | 0.38 | Psyr_4197 | | DNA replication and repair protein RecN | 0.38 | Psyr_1259 | | Exodeoxyribonuclease VII large subunit | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.38 | Psyr_4197 | | DNA replication and repair protein RecN | 0.38 | Psyr_1259 | | Exodeoxyribonuclease VII large subunit | low | > 86 |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS03060 | | DNA repair protein | 0.36 | HSERO_RS05850 | | exodeoxyribonuclease VII large subunit | 0.28 | 50 |
| Pseudomonas stutzeri RCH2 | 0.38 | Psest_0962 | | DNA repair protein RecN | 0.39 | Psest_1284 | | exodeoxyribonuclease VII, large subunit | 0.20 | 52 |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS26535 | | DNA repair protein RecN | 0.36 | QEN71_RS02835 | | exodeoxyribonuclease VII large subunit | low | > 153 |
| Pseudomonas putida KT2440 | 0.37 | PP_4729 | | factor used in recombination and DNA repair | 0.37 | PP_1027 | | Exodeoxyribonuclease 7 large subunit | low | > 96 |
| Kangiella aquimarina DSM 16071 | 0.37 | B158DRAFT_0601 | | DNA replication and repair protein RecN | 0.41 | B158DRAFT_1157 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | 0.81 | 3 |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS01065 | | DNA repair protein RecN | 0.36 | ABZR87_RS00710 | | exodeoxyribonuclease VII large subunit | 0.26 | 35 |
| Ralstonia solanacearum PSI07 | 0.36 | RPSI07_RS11890 | | DNA repair protein RecN | 0.35 | RPSI07_RS12235 | | exodeoxyribonuclease VII large subunit | 0.52 | 7 |
| Ralstonia solanacearum UW163 | 0.36 | UW163_RS08210 | | DNA repair protein RecN | 0.36 | UW163_RS08565 | | exodeoxyribonuclease VII large subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.36 | RALBFv3_RS05415 | | DNA repair protein RecN | 0.36 | RALBFv3_RS05060 | | exodeoxyribonuclease VII large subunit | 0.66 | 1 |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS05910 | | DNA repair protein | 0.35 | RR42_RS03475 | | exodeoxyribonuclease VII large subunit | 0.38 | 21 |
| Ralstonia solanacearum GMI1000 | 0.35 | RS_RS13275 | | DNA repair protein RecN | 0.36 | RS_RS12670 | | exodeoxyribonuclease VII large subunit | 0.35 | 11 |
| Paraburkholderia graminis OAS925 | 0.35 | ABIE53_000856 | | DNA repair protein RecN (Recombination protein N) | 0.35 | ABIE53_003344 | | exodeoxyribonuclease VII large subunit | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS03560 | | DNA repair protein | 0.35 | BPHYT_RS15865 | | exodeoxyribonuclease VII large subunit | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.35 | H281DRAFT_04692 | | DNA replication and repair protein RecN | 0.36 | H281DRAFT_04109 | | Exodeoxyribonuclease VII large subunit | low | > 103 |
| Dyella japonica UNC79MFTsu3.2 | 0.34 | ABZR86_RS05665 | | DNA repair protein RecN | 0.41 | ABZR86_RS06815 | | exodeoxyribonuclease VII large subunit | low | > 74 |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS07470 | | DNA repair protein RecN | 0.33 | ABCV34_RS05330 | | exodeoxyribonuclease VII large subunit | low | > 48 |
| Rhodanobacter sp. FW510-T8 | 0.33 | OKGIIK_07340 | recN | DNA repair protein RecN | 0.40 | OKGIIK_07700 | xseA | exodeoxyribonuclease VII large subunit | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.33 | LRK55_RS17815 | | DNA repair protein RecN | 0.41 | LRK55_RS17410 | | exodeoxyribonuclease VII large subunit | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.33 | LRK54_RS17960 | | DNA repair protein RecN | 0.40 | LRK54_RS17185 | | exodeoxyribonuclease VII large subunit | low | > 59 |
| Dechlorosoma suillum PS | 0.33 | Dsui_3072 | | DNA repair protein RecN | 0.37 | Dsui_3268 | | exodeoxyribonuclease VII, large subunit | 0.38 | 41 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF829 | | DNA repair protein RecN | 0.33 | GFF4511 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.32 | Ac3H11_3460 | | DNA repair protein RecN | 0.31 | Ac3H11_2382 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | low | > 79 |
| Variovorax sp. SCN45 | 0.32 | GFF2357 | | DNA repair protein RecN | 0.33 | GFF349 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | low | > 127 |
| Lysobacter sp. OAE881 | 0.31 | ABIE51_RS11655 | | DNA repair protein RecN | 0.36 | ABIE51_RS13750 | | exodeoxyribonuclease VII large subunit | low | > 62 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.30 | Xcc-8004.3431.1 | | DNA repair protein RecN | 0.37 | Xcc-8004.2251.1 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | low | > 74 |
| Sinorhizobium meliloti 1021 | 0.27 | SMc01877 | | DNA repair protein | 0.26 | SMc00378 | | exodeoxyribonuclease VII large subunit | 0.30 | 56 |
| Agrobacterium fabrum C58 | 0.26 | Atu2083 | | DNA repair protein RecN | 0.25 | Atu0269 | | exodeoxyribonuclease VII large subunit | 0.69 | 1 |
| Sphingomonas koreensis DSMZ 15582 | 0.25 | Ga0059261_1026 | | DNA repair protein RecN | 0.25 | Ga0059261_1440 | | Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.25 | BT1361 | | DNA repair protein recN (Recombination protein N) (NCBI ptt file) | 0.14 | BT3890 | | putative exodeoxyribonuclease VII large subunit (NCBI ptt file) | low | > 81 |
| Parabacteroides merdae CL09T00C40 | 0.25 | HMPREF1078_RS02000 | | DNA repair protein RecN | 0.15 | HMPREF1078_RS12780 | | exodeoxyribonuclease VII large subunit | low | > 61 |
| Bosea sp. OAE506 | 0.24 | ABIE41_RS12645 | | DNA repair protein RecN | 0.24 | ABIE41_RS23155 | | exodeoxyribonuclease VII large subunit | 0.52 | 29 |
| Rhodospirillum rubrum S1H | 0.24 | Rru_A0940 | | DNA repair protein RecN (NCBI) | 0.23 | Rru_A0159 | | Exodeoxyribonuclease VII (NCBI) | — | — |
| Bacteroides stercoris CC31F | 0.24 | HMPREF1181_RS10900 | | DNA repair protein RecN | 0.12 | HMPREF1181_RS06920 | | exodeoxyribonuclease VII large subunit | low | > 56 |
| Phaeobacter inhibens DSM 17395 | 0.24 | PGA1_c09720 | | DNA repair protein RecN | 0.27 | PGA1_c23600 | | exodeoxyribonuclease 7 large subunit | 0.29 | 19 |
| Bacteroides ovatus ATCC 8483 | 0.24 | BACOVA_00200 | | DNA repair protein RecN | 0.13 | BACOVA_01111 | | Exonuclease VII, large subunit | low | > 94 |
| Rhodopseudomonas palustris CGA009 | 0.24 | TX73_018240 | | DNA repair protein RecN | 0.25 | TX73_005960 | | exodeoxyribonuclease VII large subunit | low | > 86 |
| Azospirillum sp. SherDot2 | 0.24 | MPMX19_01601 | | DNA repair protein RecN | 0.26 | MPMX19_01631 | | Exodeoxyribonuclease 7 large subunit | 0.59 | 15 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.23 | Echvi_2067 | | DNA repair protein RecN | 0.12 | Echvi_3954 | | exodeoxyribonuclease VII, large subunit | low | > 79 |
| Phocaeicola vulgatus CL09T03C04 | 0.23 | HMPREF1058_RS18225 | | DNA repair protein RecN | 0.14 | HMPREF1058_RS02230 | | exodeoxyribonuclease VII large subunit | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.23 | ABI39_RS14500 | | DNA repair protein RecN | 0.14 | ABI39_RS01425 | | exodeoxyribonuclease VII large subunit | low | > 72 |
| Synechococcus elongatus PCC 7942 | 0.23 | Synpcc7942_1779 | recN | DNA repair protein RecN | 0.19 | Synpcc7942_0368 | xseA | exodeoxyribonuclease VII large subunit | low | > 38 |
| Fusobacterium nucleatum SB010 | 0.22 | HUW76_08055 | | DNA repair protein RecN | 0.26 | HUW76_06820 | | exodeoxyribonuclease VII large subunit | low | > 35 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.21 | CA264_13235 | | DNA repair protein RecN | 0.14 | CA264_02365 | | exodeoxyribonuclease VII large subunit | 0.59 | 12 |
| Caulobacter crescentus NA1000 | 0.21 | CCNA_02062 | | DNA repair protein recN | 0.26 | CCNA_02329 | | exodeoxyribonuclease VII large subunit | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.21 | CCNA_02062 | | DNA repair protein recN | 0.26 | CCNA_02329 | | exodeoxyribonuclease VII large subunit | low | > 67 |
| Mycobacterium tuberculosis H37Rv | 0.21 | Rv1696 | | Probable DNA repair protein RecN (recombination protein N) | 0.19 | Rv1108c | | Probable exodeoxyribonuclease VII (large subunit) XseA (exonuclease VII large subunit) | low | > 58 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.17 | DVU2463 | recN | DNA repair protein RecN (TIGR) | 0.29 | DVU1346 | xseA | exodeoxyribonuclease VII, large subunit (TIGR) | low | > 55 |
| Bifidobacterium breve UCC2003 | 0.15 | BBR_RS14030 | | DNA repair protein RecN | 0.17 | BBR_RS17920 | | exodeoxyribonuclease VII large subunit | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.09 | DvMF_0923 | | SMC domain protein (RefSeq) | 0.28 | DvMF_0122 | | exodeoxyribonuclease VII, large subunit (RefSeq) | 0.79 | 1 |
Not shown: 7 genomes with orthologs for b2616 only; 4 genomes with orthologs for b2509 only