Homologs of GFF4902 from Variovorax sp. SCN45

hypothetical protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4902 hypothetical protein insig. 100 100
  Paraburkholderia graminis OAS925 ABIE53_000505 EAL domain-containing protein (putative c-di-GMP-specific phosphodiesterase class I) insig. 31 80
  Paraburkholderia sabiae LMG 24235 QEN71_RS35150 EAL domain-containing protein insig. 33 82
  Pseudomonas aeruginosa MRSN321 DY961_RS16905 EAL domain-containing protein insig. 35 50
  Pseudomonas aeruginosa PA14 IKLFDK_10415 EAL domain-containing protein sig. 35 50
  Pseudomonas aeruginosa PUPa3 DQ20_RS39180 EAL domain-containing protein insig. 35 50
  Dinoroseobacter shibae DFL-12 Dshi_3065 diguanylate phosphodiesterase (RefSeq) sig. 33 49
  Rhodopseudomonas palustris CGA009 TX73_002740 bifunctional diguanylate cyclase/phosphodiesterase insig. 27 51
  Sinorhizobium meliloti 1021 SM_b21517 hypothetical protein insig. 32 50
  Phaeobacter inhibens DSM 17395 PGA1_c03410 EAL domain-containing protein sig. 27 53
  Magnetospirillum magneticum AMB-1 AMB_RS08445 signal transduction protein cofit 28 49
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1842.1 Mlr3171 protein insig. 32 39
  Bosea sp. OAE506 ABIE41_RS08700 bifunctional diguanylate cyclase/phosphodiesterase insig. 28 52
  Shewanella amazonensis SB2B Sama_1829 putative diguanylate phosphodiesterase (RefSeq) insig. 25 52
  Vibrio cholerae E7946 ATCC 55056 CSW01_00390 GGDEF domain-containing protein insig. 24 82
  Shewanella sp. ANA-3 Shewana3_2167 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 27 50
  Shewanella amazonensis SB2B Sama_3600 putative diguanylate phosphodiesterase (RefSeq) insig. 30 39
  Shewanella oneidensis MR-1 SO2507 GGDEF domain protein (NCBI ptt file) insig. 27 50
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2165 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 51
  Escherichia coli ECRC100 OKFHMN_21790 pdeF cyclic-guanylate-specific phosphodiesterase PdeF insig. 26 55
  Escherichia coli ECRC101 MCAODC_12320 pdeF cyclic-guanylate-specific phosphodiesterase PdeF insig. 26 55
  Escherichia coli ECRC102 NIAGMN_19560 pdeF cyclic-guanylate-specific phosphodiesterase PdeF cofit 26 55
  Escherichia coli ECRC62 BNILDI_12250 pdeF cyclic-guanylate-specific phosphodiesterase PdeF cofit 26 55
  Escherichia coli ECRC98 JDDGAC_25735 pdeF cyclic-guanylate-specific phosphodiesterase PdeF insig. 26 55
  Escherichia coli ECRC99 KEDOAH_06430 pdeF cyclic-guanylate-specific phosphodiesterase PdeF no data 26 55
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01223 Cyclic di-GMP phosphodiesterase PdeF insig. 26 62
  Rhizobium sp. OAE497 ABIE40_RS16615 EAL domain-containing protein cofit 31 52
  Escherichia coli ECOR38 HEPCGN_20955 Cytochrome C-type biogenesis protein insig. 26 55
  Rhodanobacter denitrificans MT42 LRK55_RS09660 EAL domain-containing protein insig. 27 53
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10020 EAL domain-containing protein insig. 27 53
  Klebsiella michiganensis M5al BWI76_RS21005 sensor domain-containing phosphodiesterase sig. 24 55
  Escherichia coli BL21 ECD_02395 cyclic-di-GMP phosphodiesterase, anaerobic cofit 26 55
  Escherichia coli ECOR27 NOLOHH_13440 pdeF cyclic-guanylate-specific phosphodiesterase PdeF insig. 26 55
  Escherichia coli BW25113 b2503 yfgF predicted inner membrane protein (NCBI) insig. 26 55
  Escherichia fergusonii Becca EFB2_01395 Cyclic di-GMP phosphodiesterase PdeF insig. 26 55
  Escherichia coli Nissle 1917 ECOLIN_RS14210 cyclic-guanylate-specific phosphodiesterase PdeF insig. 26 55
  Pseudomonas sp. S08-1 OH686_11905 hypothetical protein insig. 29 53
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02790 EAL domain-containing protein insig. 28 40
  Enterobacter sp. TBS_079 MPMX20_03288 putative cyclic di-GMP phosphodiesterase PdeA sig. 27 51
  Rhodospirillum rubrum S1H Rru_A1659 Putative diguanylate phosphodiesterase (EAL domain) (NCBI) insig. 26 39
  Marinobacter adhaerens HP15 HP15_2525 EAL domain protein cofit 38 25
  Pseudomonas fluorescens FW300-N2C3 AO356_22830 diguanylate phosphodiesterase insig. 27 45
  Xanthobacter sp. DMC5 GFF2621 hypothetical protein insig. 26 50
  Enterobacter asburiae PDN3 EX28DRAFT_0230 FOG: EAL domain insig. 28 48
  Acidovorax sp. GW101-3H11 Ac3H11_4120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 24 80
  Pseudomonas aeruginosa PA14 IKLFDK_19700 cyclic diguanylate phosphodiesterase insig. 28 42
  Cupriavidus basilensis FW507-4G11 RR42_RS03995 diguanylate cyclase insig. 26 39
  Kangiella aquimarina DSM 16071 B158DRAFT_2394 diguanylate cyclase (GGDEF) domain strong 23 40
  Rhizobium sp. OAE497 ABIE40_RS16745 EAL domain-containing protein insig. 26 46
  Castellaniella sp019104865 MT123 ABCV34_RS12680 bifunctional diguanylate cyclase/phosphodiesterase sig. 25 36
  Enterobacter asburiae PDN3 EX28DRAFT_1002 diguanylate cyclase (GGDEF) domain insig. 23 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3621 FOG: EAL domain sig. 28 46
  Shewanella loihica PV-4 Shew_2065 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 24 46
  Mycobacterium tuberculosis H37Rv Rv1354c Conserved hypothetical protein insig. 30 40
  Pseudomonas aeruginosa MRSN321 DY961_RS13765 EAL domain-containing protein insig. 29 39
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_452 Rtn protein insig. 26 45
  Pseudomonas aeruginosa PUPa3 DQ20_RS49030 EAL domain-containing protein no data 29 39
  Paraburkholderia graminis OAS925 ABIE53_003996 diguanylate cyclase (GGDEF)-like protein sig. 27 37
  Rhizobium sp. OAE497 ABIE40_RS15540 EAL domain-containing protein insig. 27 60
  Enterobacter sp. TBS_079 MPMX20_01826 putative cyclic di-GMP phosphodiesterase PdeG insig. 27 48
  Rhodanobacter sp. FW510-T8 OKGIIK_16275 Diguanylate cyclase insig. 28 40
  Pseudomonas sp. S08-1 OH686_21075 Sensory box/GGDEF family protein insig. 23 77
  Klebsiella pneumoniae MKP103 KDGMDA_27405 Anti-FlhC(2)FlhD(4) factor YdiV insig. 24 50
  Klebsiella pneumoniae MRSN742743 KFA93_RS05730 EAL domain-containing protein insig. 24 50
  Klebsiella michiganensis M5al BWI76_RS20545 sensor domain-containing phosphodiesterase insig. 23 50
  Magnetospirillum magneticum AMB-1 AMB_RS15570 signal transduction protein insig. 29 47
  Pseudomonas sp. DMC3 GFF1254 hypothetical protein insig. 30 39
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2889.1 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 29 39
  Pseudomonas fluorescens SBW25 PFLU_RS14595 EAL domain-containing protein insig. 29 38
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14595 EAL domain-containing protein sig. 29 38
  Caulobacter crescentus NA1000 CCNA_00940 sensory box GGDEF/EAL protein insig. 27 53
  Caulobacter crescentus NA1000 Δfur CCNA_00940 sensory box GGDEF/EAL protein insig. 27 53
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02610 cyclic diguanylate phosphodiesterase cofit 25 51
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02935 putative cyclic di-GMP phosphodiesterase PdeG cofit 28 38
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01352 diguanylate cyclase/phosphodiesterase insig. 27 33
  Dechlorosoma suillum PS Dsui_2421 EAL domain-containing protein cofit 38 30
  Acidovorax sp. GW101-3H11 Ac3H11_2446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 26 42
  Rhizobium sp. OAE497 ABIE40_RS27590 EAL domain-containing protein insig. 27 40
  Enterobacter sp. TBS_079 MPMX20_02445 putative signaling protein insig. 23 80
  Shewanella loihica PV-4 Shew_3724 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 22 82
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2829 Rtn protein insig. 25 39
  Pseudomonas orientalis W4I3 QF045_RS15940 EAL domain-containing protein cofit 27 38
  Pseudomonas syringae pv. syringae B728a Psyr_2711 diguanylate cyclase/phosphodiesterase insig. 27 43
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2711 diguanylate cyclase/phosphodiesterase insig. 27 43
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 23 84
  Sinorhizobium meliloti 1021 SMa0137 Diguanylate cyclase/phosphodiesterase insig. 28 41
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_25385 sensor domain-containing phosphodiesterase cofit 25 49
  Erwinia tracheiphila SCR3 LU632_RS10990 sensor domain-containing phosphodiesterase strong 25 49
  Xanthobacter sp. DMC5 GFF741 putative cyclic di-GMP phosphodiesterase PdeB insig. 25 42
  Pseudomonas simiae WCS417 PS417_08615 diguanylate phosphodiesterase insig. 35 24
  Marinobacter adhaerens HP15 HP15_3980 diguanylate cyclase/phosphodiesterase insig. 28 39
  Rahnella sp. WP5 EX31_RS22670 sensor domain-containing phosphodiesterase insig. 25 58
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02124 EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) insig. 32 36
  Pseudomonas putida KT2440 PP_1761 diguanylate cyclase with phosphodiesterase domain strong 27 39
  Acidovorax sp. GW101-3H11 Ac3H11_2498 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 27 49
  Paraburkholderia graminis OAS925 ABIE53_000547 EAL domain-containing protein (putative c-di-GMP-specific phosphodiesterase class I) sig. 32 36
  Paraburkholderia sabiae LMG 24235 QEN71_RS00935 EAL domain-containing protein insig. 31 36
  Pseudomonas syringae pv. syringae B728a Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 30 40
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2432 diguanylate cyclase/phosphodiesterase insig. 30 40
  Shewanella loihica PV-4 Shew_3125 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 24 56