Homologs of PS417_22750 from Pseudomonas simiae WCS417

RND transporter
SEED: Probable RND efflux membrane fusion protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_22750 RND transporter insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS24400 efflux RND transporter periplasmic adaptor subunit insig. 95 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24400 efflux RND transporter periplasmic adaptor subunit insig. 95 100
o Pseudomonas fluorescens FW300-N2E3 AO353_03995 RND transporter insig. 81 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1772 Probable Co/Zn/Cd efflux system membrane fusion protein insig. 78 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5615 Probable Co/Zn/Cd efflux system membrane fusion protein sig. 80 99
o Pseudomonas fluorescens FW300-N2C3 AO356_18445 RND transporter sig. 79 99
o Pseudomonas sp. RS175 PFR28_03329 Multidrug export protein AcrE insig. 79 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_719 Probable Co/Zn/Cd efflux system membrane fusion protein insig. 77 99
o Pseudomonas sp. DMC3 GFF5068 Multidrug resistance protein MdtA insig. 78 99
o Pseudomonas sp. SVBP6 COO64_RS12060 efflux RND transporter periplasmic adaptor subunit insig. 73 99
o Pseudomonas sp. BP01 JOY50_RS14950 efflux RND transporter periplasmic adaptor subunit insig. 67 99
o Pseudomonas putida KT2440 PP_0907 RND efflux membrane fusion protein-related protein insig. 67 99
o Pseudomonas sp. S08-1 OH686_17365 Multidrug efflux system, membrane fusion component strong 64 99
o Pseudomonas aeruginosa PA14 IKLFDK_02230 multidrug efflux RND transporter periplasmic adaptor subunit MexV insig. 59 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS57070 mexV;inference=COORDINATES multidrug efflux RND transporter periplasmic adaptor subunit MexV insig. 59 100
o Pseudomonas aeruginosa MRSN321 DY961_RS24620 mexV;inference=COORDINATES multidrug efflux RND transporter periplasmic adaptor subunit MexV insig. 59 100
o Pseudomonas segetis P6 ACVTMO_RS18675 efflux RND transporter periplasmic adaptor subunit cofit 61 97
o Pseudomonas stutzeri RCH2 Psest_1154 RND family efflux transporter, MFP subunit strong 59 98
  Pseudomonas fluorescens SBW25 PFLU_RS24390 efflux RND transporter periplasmic adaptor subunit insig. 57 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24390 efflux RND transporter periplasmic adaptor subunit insig. 57 98
o Magnetospirillum magneticum AMB-1 AMB_RS17265 MexH family multidrug efflux RND transporter periplasmic adaptor subunit insig. 41 100
o Rhodospirillum rubrum S1H Rru_A3700 Secretion protein HlyD (NCBI) strong 39 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS26020 efflux RND transporter periplasmic adaptor subunit insig. 41 97
o Azospirillum brasilense Sp245 AZOBR_RS31315 RND transporter strong 42 96
o Marinobacter adhaerens HP15 HP15_3261 efflux transporter, RND family, MFP subunit strong 39 97
o Azospirillum sp. SherDot2 MPMX19_05611 Multidrug resistance protein MdtA insig. 40 98
o Burkholderia phytofirmans PsJN BPHYT_RS29555 MexH family multidrug efflux RND transporter periplasmic adaptor subunit insig. 38 97
o Xanthobacter sp. DMC5 GFF2737 Multidrug resistance protein MdtE insig. 39 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS42080 efflux RND transporter periplasmic adaptor subunit insig. 39 97
o Rhodopseudomonas palustris CGA009 TX73_019550 efflux RND transporter periplasmic adaptor subunit cofit 39 92
o Variovorax sp. SCN45 GFF265 RND efflux system, membrane fusion protein insig. 40 95
o Shewanella sp. ANA-3 Shewana3_0372 RND family efflux transporter MFP subunit (RefSeq) sig. 37 89
o Vibrio cholerae E7946 ATCC 55056 CSW01_00855 MexH family multidrug efflux RND transporter periplasmic adaptor subunit cofit 37 97
o Shewanella oneidensis MR-1 SO4327 HlyD family secretion domain protein (NCBI ptt file) strong 36 89
o Shewanella amazonensis SB2B Sama_3268 HlyD family secretion protein (RefSeq) strong 34 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1218 Probable Co/Zn/Cd efflux system membrane fusion protein cofit 35 100
  Variovorax sp. SCN45 GFF3510 Multidrug efflux system, membrane fusion component => MexH of MexHI-OpmD system insig. 36 86
  Azospirillum sp. SherDot2 MPMX19_04344 Multidrug resistance protein MdtA insig. 37 85
  Pseudomonas sp. SVBP6 COO64_RS10720 efflux RND transporter periplasmic adaptor subunit insig. 36 88
  Dechlorosoma suillum PS Dsui_1556 RND family efflux transporter, MFP subunit insig. 36 85
  Pseudomonas putida KT2440 PP_2064 Multidrug efflux RND membrane fusion protein insig. 37 85
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1261.1 Membrane fusion protein of RND family multidrug efflux pump insig. 37 95
  Shewanella oneidensis MR-1 SO1881 HlyD family-related protein (NCBI ptt file) insig. 35 90
  Shewanella amazonensis SB2B Sama_1906 HlyD family-like protein (RefSeq) strong 32 93
  Shewanella sp. ANA-3 Shewana3_1658 RND family efflux transporter MFP subunit (RefSeq) insig. 35 87
  Azospirillum brasilense Sp245 AZOBR_RS22125 secretion protein insig. 34 85
  Pseudomonas sp. BP01 JOY50_RS22270 efflux RND transporter periplasmic adaptor subunit insig. 37 85
  Acidovorax sp. GW101-3H11 Ac3H11_481 Probable Co/Zn/Cd efflux system membrane fusion protein insig. 36 82
o Bosea sp. OAE506 ABIE41_RS07730 efflux RND transporter periplasmic adaptor subunit insig. 35 87
  Pseudomonas aeruginosa PA14 IKLFDK_21655 multidrug efflux RND transporter periplasmic adaptor MexH strong 39 88
  Pseudomonas aeruginosa MRSN321 DY961_RS28520 mexH;inference=COORDINATES multidrug efflux RND transporter periplasmic adaptor MexH sig. 39 88
o Lysobacter sp. OAE881 ABIE51_RS16990 efflux RND transporter periplasmic adaptor subunit insig. 36 86
o Shewanella loihica PV-4 Shew_1851 RND family efflux transporter MFP subunit (RefSeq) insig. 32 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4260 Probable Co/Zn/Cd efflux system membrane fusion protein insig. 36 82
o Alteromonas macleodii MIT1002 MIT1002_00728 Multidrug transporter MdtA insig. 32 87
  Pseudomonas sp. S08-1 OH686_22665 Probable RND efflux membrane fusion protein cofit 34 81
  Vibrio cholerae E7946 ATCC 55056 CSW01_04690 MexH family multidrug efflux RND transporter periplasmic adaptor subunit insig. 32 87
  Rhodospirillum rubrum S1H Rru_A2095 Secretion protein HlyD (NCBI) insig. 33 82
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13035 MexH family multidrug efflux RND transporter periplasmic adaptor subunit insig. 31 86
o Caulobacter crescentus NA1000 CCNA_01261 periplasmic multidrug efflux lipoprotein precursor cofit 30 86
o Caulobacter crescentus NA1000 Δfur CCNA_01261 periplasmic multidrug efflux lipoprotein precursor cofit 30 86
  Shewanella oneidensis MR-1 SO3483 HlyD family secretion protein (NCBI ptt file) sig. 30 94
  Shewanella loihica PV-4 Shew_1177 RND family efflux transporter MFP subunit (RefSeq) insig. 32 86
  Shewanella sp. ANA-3 Shewana3_1084 RND family efflux transporter MFP subunit (RefSeq) cofit 31 89
  Marinobacter adhaerens HP15 HP15_3694 efflux transporter, RND family, MFP subunit insig. 32 84
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07785 efflux RND transporter periplasmic adaptor subunit insig. 29 86
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19055 efflux RND transporter periplasmic adaptor subunit insig. 30 84
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0680 RND family efflux transporter, MFP subunit sig. 29 86
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17645 efflux transporter periplasmic adaptor subunit insig. 30 81
o Sphingobium sp. HT1-2 GFF2496 RND efflux system, membrane fusion protein cofit 31 95
  Rhizobium sp. OAE497 ABIE40_RS11660 efflux RND transporter periplasmic adaptor subunit insig. 28 81
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11900 efflux RND transporter periplasmic adaptor subunit strong 32 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05465 efflux RND transporter periplasmic adaptor subunit insig. 27 80
  Alteromonas macleodii MIT1002 MIT1002_01304 Multidrug transporter MdtA insig. 29 82
  Sinorhizobium meliloti 1021 SM_b21497 acriflavin resistance protein insig. 31 85
  Rhodopseudomonas palustris CGA009 TX73_013305 efflux RND transporter periplasmic adaptor subunit cofit 27 99
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03650 MexE family multidrug efflux RND transporter periplasmic adaptor subunit strong 30 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18125 multidrug transporter subunit MdtA insig. 27 97
  Ralstonia solanacearum UW163 UW163_RS21005 multidrug transporter subunit MdtA insig. 27 97
  Sinorhizobium meliloti 1021 SMc01458 transporter cofit 27 83
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2439.1 Probable Co/Zn/Cd efflux system membrane fusion protein insig. 29 95
o Bacteroides stercoris CC31F HMPREF1181_RS09450 efflux RND transporter periplasmic adaptor subunit insig. 27 81
  Variovorax sp. SCN45 GFF6660 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA insig. 27 87
o Bacteroides thetaiotaomicron VPI-5482 BT2251 putative membrane fusion protein precursor (NCBI ptt file) insig. 27 82
  Variovorax sp. OAS795 ABID97_RS17355 efflux RND transporter periplasmic adaptor subunit insig. 30 84
  Rhodanobacter denitrificans MT42 LRK55_RS11625 efflux RND transporter periplasmic adaptor subunit cofit 30 86
  Rhodanobacter sp. FW510-T8 OKGIIK_11995 efflux RND transporter periplasmic adaptor subunit cofit 30 85
  Desulfovibrio vulgaris Hildenborough JW710 DVU3247 efflux transporter, RND family, MFP subunit (TIGR) insig. 29 84
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4791.1 Probable Co/Zn/Cd efflux system membrane fusion protein insig. 28 88
  Shewanella oneidensis MR-1 SO4015 conserved hypothetical protein (NCBI ptt file) no data 27 88
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3803 RND family efflux transporter, MFP subunit insig. 29 87
  Burkholderia phytofirmans PsJN BPHYT_RS29010 RND transporter no data 28 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS29855 efflux RND transporter periplasmic adaptor subunit insig. 28 97
  Lysobacter sp. OAE881 ABIE51_RS09285 efflux RND transporter periplasmic adaptor subunit insig. 28 87
  Pseudomonas aeruginosa MRSN321 DY961_RS05000 muxA;inference=COORDINATES multidrug efflux RND transporter periplasmic adaptor subunit MuxA sig. 27 87
  Pseudomonas aeruginosa PA14 IKLFDK_12425 multidrug efflux RND transporter periplasmic adaptor subunit MuxA sig. 27 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS35890 muxA;inference=COORDINATES multidrug efflux RND transporter periplasmic adaptor subunit MuxA strong 27 87
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03180 efflux transporter periplasmic adaptor subunit strong 27 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS19030 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit strong 26 97