Homologs of PGA1_c02110 from Phaeobacter inhibens DSM 17395

tRNA 2-thiocytidine biosynthesis protein TtcA
SEED: tRNA(Cytosine32)-2-thiocytidine synthetase
KEGG: tRNA 2-thiocytidine biosynthesis protein TtcA

125 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c02110 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 100 100
o Dinoroseobacter shibae DFL-12 Dshi_0330 PP-loop domain protein (RefSeq) insig. 84 96
o Sinorhizobium meliloti 1021 SMc00534 C32 tRNA thiolase insig. 65 91
o Agrobacterium fabrum C58 Atu1858 hypothetical protein sig. 67 92
o Rhizobium sp. OAE497 ABIE40_RS10230 tRNA 2-thiocytidine(32) synthetase TtcA insig. 64 94
o Alteromonas macleodii MIT1002 MIT1002_02139 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 52 95
o Vibrio cholerae E7946 ATCC 55056 CSW01_07180 tRNA 2-thiocytidine(32) synthetase TtcA insig. 53 92
o Pseudomonas stutzeri RCH2 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control insig. 54 88
o Rahnella sp. WP5 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 92
  Acidovorax sp. GW101-3H11 Ac3H11_1817 tRNA(Cytosine32)-2-thiocytidine synthetase cofit 54 86
o Pseudomonas sp. S08-1 OH686_05145 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA cofit 54 88
o Ralstonia solanacearum PSI07 RPSI07_RS23130 tRNA 2-thiocytidine(32) synthetase TtcA insig. 52 92
o Ralstonia sp. UNC404CL21Col ABZR87_RS05700 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 92
o Pseudomonas segetis P6 ACVTMO_RS08965 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 54 87
o Erwinia amylovora T8 OLJFJH_13765 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 92
o Pseudomonas aeruginosa MRSN321 DY961_RS06455 ttcA;go_process=tRNA tRNA 2-thiocytidine(32) synthetase TtcA insig. 54 86
o Pseudomonas aeruginosa PA14 IKLFDK_05600 tRNA 2-thiocytidine(32) synthetase TtcA insig. 54 86
o Pseudomonas aeruginosa PUPa3 DQ20_RS46340 ttcA;go_process=tRNA tRNA 2-thiocytidine(32) synthetase TtcA insig. 54 86
o Ralstonia solanacearum GMI1000 RS_RS00865 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 92
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10245 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 92
o Ralstonia solanacearum UW163 UW163_RS03335 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 92
o Dickeya dianthicola 67-19 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 92
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS09630 ttcA tRNA 2-thiocytidine(32) synthetase TtcA cofit 50 92
o Dickeya dianthicola ME23 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 92
o Escherichia coli ECRC62 BNILDI_18020 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
o Enterobacter sp. TBS_079 MPMX20_02440 tRNA-cytidine(32) 2-sulfurtransferase insig. 49 92
o Escherichia coli BL21 ECD_01321 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein insig. 50 92
o Escherichia coli ECOR27 NOLOHH_19870 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
o Escherichia coli ECRC100 OKFHMN_02155 ttcA tRNA 2-thiocytidine(32) synthetase TtcA no data 50 92
o Escherichia coli ECRC101 MCAODC_16100 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
o Escherichia coli ECRC102 NIAGMN_26325 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
o Escherichia coli ECRC98 JDDGAC_04715 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
o Escherichia coli ECRC99 KEDOAH_26600 ttcA tRNA 2-thiocytidine(32) synthetase TtcA no data 50 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02337 tRNA-cytidine(32) 2-sulfurtransferase insig. 50 92
  Acidovorax sp. GW101-3H11 Ac3H11_3296 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 52 90
o Kangiella aquimarina DSM 16071 B158DRAFT_2154 tRNA s(2)C-32 sulfurtransferase (EC 2.8.1.4) insig. 51 88
o Escherichia coli ECOR38 HEPCGN_26005 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
o Escherichia coli BW25113 b1344 ydaO predicted C32 tRNA thiolase (NCBI) sig. 50 92
o Pectobacterium carotovorum WPP14 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS28595 tRNA 2-thiocytidine(32) synthetase TtcA cofit 53 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05824 tRNA s(2)C-32 sulfurtransferase insig. 54 87
o Dickeya dadantii 3937 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
o Pantoea sp. MT58 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
o Klebsiella michiganensis M5al BWI76_RS12710 tRNA 2-thiocytidine(32) synthetase TtcA insig. 49 91
o Enterobacter asburiae PDN3 EX28DRAFT_1007 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control insig. 49 92
  Burkholderia phytofirmans PsJN BPHYT_RS18570 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 53 87
o Escherichia coli Nissle 1917 ECOLIN_RS08065 tRNA 2-thiocytidine(32) synthetase TtcA no data 49 92
o Lysobacter sp. OAE881 ABIE51_RS01305 tRNA 2-thiocytidine(32) synthetase TtcA insig. 54 87
o Methylophilus sp. DMC18 GFF1541 tRNA-cytidine(32) 2-sulfurtransferase insig. 50 88
o Variovorax sp. SCN45 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA insig. 54 87
o Escherichia fergusonii Becca EFB2_02583 tRNA-cytidine(32) 2-sulfurtransferase insig. 49 92
  Paraburkholderia graminis OAS925 ABIE53_000036 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 53 87
o Serratia liquefaciens MT49 IAI46_13420 tRNA 2-thiocytidine(32) synthetase TtcA insig. 49 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase strong 49 92
o Klebsiella pneumoniae MKP103 KDGMDA_20605 tRNA 2-thiocytidine(32) synthetase TtcA sig. 49 91
o Klebsiella pneumoniae MRSN742743 KFA93_RS23490 ttcA;go_process=tRNA tRNA 2-thiocytidine(32) synthetase TtcA sig. 49 91
o Variovorax sp. OAS795 ABID97_RS06505 tRNA 2-thiocytidine(32) synthetase TtcA insig. 53 87
o Cupriavidus basilensis FW507-4G11 RR42_RS01445 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 52 88
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase strong 51 88
o Dechlorosoma suillum PS Dsui_0695 putative ATPase of the PP-loop superfamily implicated in cell cycle control insig. 50 88
o Pseudomonas fluorescens FW300-N2C3 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 52 87
o Pseudomonas sp. RS175 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase insig. 51 88
o Pseudomonas sp. SVBP6 COO64_RS07395 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 52 88
o Herbaspirillum seropedicae SmR1 HSERO_RS22035 tRNA 2-thiocytidine biosynthesis protein TtcA insig. 50 88
o Pseudomonas fluorescens FW300-N2E3 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 51 88
o Pseudomonas protegens RBAN4 FABNJH_23060 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 48 89
  Castellaniella sp019104865 MT123 ABCV34_RS10450 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 85
o Pseudomonas syringae pv. syringae B728a Psyr_3705 conserved hypothetical protein insig. 50 88
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3705 conserved hypothetical protein insig. 50 88
o Marinobacter adhaerens HP15 HP15_2116 PP-loop domain protein insig. 50 86
o Pseudomonas sp. DMC3 GFF4833 tRNA-cytidine(32) 2-sulfurtransferase cofit 50 89
o Pseudomonas putida KT2440 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 52 87
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 50 89
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_24015 ttcA tRNA 2-thiocytidine(32) synthetase TtcA cofit 49 89
o Erwinia tracheiphila SCR3 LU632_RS12165 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 49 89
  Shewanella amazonensis SB2B Sama_1801 hypothetical protein (RefSeq) sig. 49 88
o Pseudomonas sp. BP01 JOY50_RS23840 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 52 87
o Pseudomonas fluorescens SBW25 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 89
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA sig. 50 89
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1658 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 52 87
o Shewanella oneidensis MR-1 SO2354 conserved hypothetical protein (NCBI ptt file) insig. 49 88
o Pseudomonas simiae WCS417 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA sig. 50 89
o Pseudomonas orientalis W4I3 QF045_RS18170 tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 89
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03610 tRNA-cytidine(32) 2-sulfurtransferase insig. 50 89
  Shewanella sp. ANA-3 Shewana3_2117 PP-loop domain-containing protein (RefSeq) sig. 49 87
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 50 88
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS16485 tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 92
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase insig. 52 86
o Rhodanobacter denitrificans MT42 LRK55_RS10320 tRNA 2-thiocytidine(32) synthetase TtcA insig. 51 95
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03470 tRNA 2-thiocytidine(32) synthetase TtcA insig. 53 88
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10680 tRNA 2-thiocytidine(32) synthetase TtcA insig. 52 90
o Acinetobacter baumannii LAC-4 RR41_RS04315 tRNA 2-thiocytidine(32) synthetase TtcA sig. 49 88
  Shewanella loihica PV-4 Shew_1995 PP-loop domain-containing protein (RefSeq) insig. 48 87
o Acinetobacter radioresistens SK82 MPMX26_00810 tRNA-cytidine(32) 2-sulfurtransferase insig. 49 88
o Rhodanobacter sp. FW510-T8 OKGIIK_13200 ttcA tRNA 2-thiocytidine(32) synthetase TtcA insig. 50 87
  Fusobacterium nucleatum SB010 HUW76_05920 tRNA 2-thiocytidine(32) synthetase TtcA strong 32 82
  Bacteroides thetaiotaomicron VPI-5482 BT4558 conserved hypothetical protein (NCBI ptt file) insig. 31 84
  Bacteroides ovatus ATCC 8483 BACOVA_05345 PP-loop family protein sig. 32 84
  Bacteroides stercoris CC31F HMPREF1181_RS13335 adenine nucleotide alpha hydrolase family protein insig. 32 83
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13920 tRNA 2-thiocytidine biosynthesis TtcA family protein insig. 29 87
  Phocaeicola dorei CL03T12C01 ABI39_RS18325 adenine nucleotide alpha hydrolase family protein sig. 32 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05785 adenine nucleotide alpha hydrolase family protein insig. 31 82
  Desulfovibrio vulgaris Hildenborough JW710 DVU3241 conserved hypothetical protein (TIGR) insig. 29 69
  Desulfovibrio vulgaris Miyazaki F DvMF_2293 PP-loop domain protein (RefSeq) insig. 33 57
  Methanococcus maripaludis S2 MMP_RS06995 TIGR00269 family protein no data 28 68
  Methanococcus maripaludis JJ MMJJ_RS07360 TIGR00269 family protein insig. 28 68
  Methanococcus maripaludis JJ MMJJ_RS07375 tRNA 2-thiocytidine biosynthesis TtcA family protein strong 26 71
  Methanococcus maripaludis S2 MMP_RS06980 tRNA 2-thiocytidine biosynthesis TtcA family protein strong 26 71
  Desulfovibrio vulgaris Miyazaki F DvMF_2330 PP-loop domain protein (RefSeq) insig. 25 76
  Desulfovibrio vulgaris Hildenborough JW710 DVU0135 conserved hypothetical protein (TIGR) sig. 25 71
  Pseudomonas sp. S08-1 OH686_06400 tRNA(Ile)-lysidine synthetase no data 32 56
  Dinoroseobacter shibae DFL-12 Dshi_1114 tRNA(Ile)-lysidine synthetase (RefSeq) no data 29 51
  Pseudomonas syringae pv. syringae B728a Psyr_1360 PP-loop no data 30 57
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1360 PP-loop no data 30 57
  Azospirillum sp. SherDot2 MPMX19_00706 tRNA(Ile)-lysidine synthase no data 32 51
  Methylophilus sp. DMC18 GFF1274 tRNA(Ile)-lysidine synthase no data 30 57
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00330 tRNA lysidine(34) synthetase TilS no data 27 69
  Variovorax sp. SCN45 GFF547 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) no data 29 56
  Bacteroides thetaiotaomicron VPI-5482 BT1593 putative cell-cycle protein (NCBI ptt file) no data 29 42
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5138 tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) no data 25 74
  Ralstonia solanacearum GMI1000 RS_RS05830 tRNA lysidine(34) synthetase TilS no data 24 67
  Variovorax sp. OAS795 ABID97_RS17830 tRNA lysidine(34) synthetase TilS no data 27 63
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18210 tRNA lysidine(34) synthetase TilS no data 26 63
  Ralstonia sp. UNC404CL21Col ABZR87_RS10660 tRNA lysidine(34) synthetase TilS no data 24 71
  Pseudomonas stutzeri RCH2 Psest_2825 tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain no data 29 56