Homologs of GFF1987 from Variovorax sp. SCN45

Pseudouridine synthase (EC 4.2.1.70), PA2043 type
SEED: Similar to ribosomal large subunit pseudouridine synthase A

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1987 Pseudouridine synthase (EC 4.2.1.70), PA2043 type insig. 100 100
o Variovorax sp. OAS795 ABID97_RS25165 pseudouridine synthase insig. 84 98
o Acidovorax sp. GW101-3H11 Ac3H11_4190 Similar to ribosomal large subunit pseudouridine synthase A insig. 53 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5185 Similar to ribosomal large subunit pseudouridine synthase A insig. 51 93
o Lysobacter sp. OAE881 ABIE51_RS09995 pseudouridine synthase insig. 49 96
o Pseudomonas fluorescens SBW25 PFLU_RS08610 pseudouridine synthase cofit 50 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08610 pseudouridine synthase strong 50 91
o Herbaspirillum seropedicae SmR1 HSERO_RS13490 pseudouridine synthase insig. 48 95
o Pseudomonas syringae pv. syringae B728a Psyr_2133 Pseudouridine synthase insig. 50 92
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2133 Pseudouridine synthase insig. 50 92
o Pseudomonas sp. S08-1 OH686_18350 Pseudouridine synthase , type insig. 51 92
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01863 hypothetical protein cofit 50 92
o Pseudomonas aeruginosa MRSN321 DY961_RS16400 RluA family pseudouridine synthase sig. 51 91
o Pseudomonas aeruginosa PA14 IKLFDK_09995 pseudouridine synthase sig. 51 91
o Pseudomonas aeruginosa PUPa3 DQ20_RS38725 RluA family pseudouridine synthase sig. 51 91
o Pseudomonas fluorescens FW300-N2C3 AO356_03000 pseudouridine synthase insig. 50 92
o Rhodanobacter denitrificans MT42 LRK55_RS15670 RluA family pseudouridine synthase insig. 50 91
o Pseudomonas simiae WCS417 PS417_08655 pseudouridine synthase insig. 50 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15915 RluA family pseudouridine synthase insig. 50 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2270 Similar to ribosomal large subunit pseudouridine synthase A insig. 50 92
o Pseudomonas orientalis W4I3 QF045_RS11365 pseudouridine synthase insig. 49 92
o Pseudomonas stutzeri RCH2 Psest_3527 Pseudouridylate synthases, 23S RNA-specific insig. 48 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2426 Similar to ribosomal large subunit pseudouridine synthase A sig. 50 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5337.1 Similar to ribosomal large subunit pseudouridine synthase A insig. 49 95
o Pseudomonas sp. RS175 PFR28_01002 hypothetical protein sig. 50 91
o Pseudomonas sp. BP01 JOY50_RS22025 pseudouridine synthase insig. 50 91
o Pseudomonas sp. DMC3 GFF4577 hypothetical protein insig. 49 92
o Pseudomonas fluorescens FW300-N2E3 AO353_19240 pseudouridine synthase sig. 49 92
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_239 Similar to ribosomal large subunit pseudouridine synthase A insig. 48 92
o Pseudomonas segetis P6 ACVTMO_RS18770 pseudouridine synthase insig. 46 92
o Pseudomonas sp. SVBP6 COO64_RS05220 pseudouridine synthase insig. 49 91
o Rhodanobacter sp. FW510-T8 OKGIIK_09070 Pseudouridine synthase insig. 51 93
o Pseudomonas putida KT2440 PP_2110 putative ribosomal large subunit pseudouridine synthase insig. 50 91
o Acinetobacter radioresistens SK82 MPMX26_01205 hypothetical protein strong 43 95
o Acinetobacter baumannii LAC-4 RR41_RS07060 pseudouridylate synthase insig. 42 95
o Shewanella amazonensis SB2B Sama_0506 pseudouridine synthase (RefSeq) insig. 42 90
o Shewanella sp. ANA-3 Shewana3_3712 pseudouridine synthase (RefSeq) cofit 40 91
o Kangiella aquimarina DSM 16071 B158DRAFT_1363 Pseudouridylate synthases, 23S RNA-specific insig. 38 91
  Mycobacterium tuberculosis H37Rv Rv3300c Conserved hypothetical protein insig. 46 75
o Shewanella loihica PV-4 Shew_3348 pseudouridine synthase (RefSeq) insig. 33 87
  Bifidobacterium breve UCC2003 BBR_RS13075 23S rRNA pseudouridylate synthase insig. 35 66
  Acinetobacter baumannii LAC-4 RR41_RS05195 RluA family pseudouridine synthase insig. 35 68
  Alteromonas macleodii MIT1002 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C insig. 34 68
  Synechocystis sp000284455 PCC 6803 SGL_RS04000 RluA family pseudouridine synthase insig. 27 93
  Marinobacter adhaerens HP15 HP15_2221 pseudouridine synthase, RluA family sig. 32 70
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3705 Pseudouridylate synthases, 23S RNA-specific insig. 32 56
  Vibrio cholerae E7946 ATCC 55056 CSW01_14535 RluA family pseudouridine synthase insig. 32 64
  Acinetobacter radioresistens SK82 MPMX26_01026 Dual-specificity RNA pseudouridine synthase RluA cofit 33 67
  Desulfovibrio vulgaris Hildenborough JW710 DVU1024 rluD/coaE ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) insig. 32 67
  Pseudomonas sp. SVBP6 COO64_RS06925 RluA family pseudouridine synthase insig. 30 67
  Sphingobium sp. HT1-2 GFF1481 RNA pseudouridylate synthase cofit 32 56
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05045 23S rRNA pseudouridine(1911/1915/1917) synthase RluD insig. 31 73
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19675 RNA pseudouridine synthase strong 33 56
  Variovorax sp. SCN45 GFF7036 LSU rRNA pseudouridine(746) synthase (EC 5.4.99.29) @ tRNA pseudouridine(32) synthase (EC 5.4.99.28) insig. 33 65
  Rhodanobacter sp. FW510-T8 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 29 87
  Shewanella loihica PV-4 Shew_2529 pseudouridine synthase (RefSeq) insig. 32 66
  Enterobacter sp. TBS_079 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C sig. 33 67
  Rhodanobacter denitrificans MT42 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 73
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 30 73
  Acinetobacter baumannii LAC-4 RR41_RS16980 RluA family pseudouridine synthase sig. 36 55
  Escherichia coli BL21 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase strong 33 67
  Escherichia fergusonii Becca EFB2_02889 Ribosomal large subunit pseudouridine synthase C insig. 33 67
  Escherichia coli ECOR27 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 33 67
  Escherichia coli ECOR38 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 33 67
  Escherichia coli ECRC100 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 33 67
  Escherichia coli ECRC101 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 33 67
  Escherichia coli ECRC102 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 67
  Escherichia coli ECRC62 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 67
  Escherichia coli ECRC98 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 67
  Escherichia coli ECRC99 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC no data 33 67
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C strong 33 67
  Escherichia coli BW25113 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) strong 33 67
  Escherichia coli Nissle 1917 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 33 67
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD strong 31 71
  Agrobacterium fabrum C58 Atu4041 ribosomal large subunit pseudouridine synthase A sig. 35 54
  Vibrio cholerae E7946 ATCC 55056 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 68
  Bacteroides ovatus ATCC 8483 BACOVA_05306 pseudouridine synthase, RluA family insig. 32 68
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 32 68
  Shewanella amazonensis SB2B Sama_0606 pseudouridylate synthase (RefSeq) sig. 31 66
  Sphingobium sp. HT1-2 GFF4062 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 31 69
  Pseudomonas putida KT2440 PP_1731 23S rRNA (746) and tRNA (32) pseudouridine synthase sig. 29 67
  Pseudomonas sp. BP01 JOY50_RS16355 RluA family pseudouridine synthase insig. 29 67
  Acinetobacter radioresistens SK82 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C insig. 33 55
  Enterobacter asburiae PDN3 EX28DRAFT_1844 pseudouridine synthase, RluA family insig. 33 67
  Shewanella sp. ANA-3 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) sig. 32 68
  Lysobacter sp. OAE881 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD cofit 30 86
  Pseudomonas sp. RS175 PFR28_03154 Dual-specificity RNA pseudouridine synthase RluA insig. 29 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0048 Pseudouridylate synthases, 23S RNA-specific strong 30 56
  Rahnella sp. WP5 EX31_RS03750 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 34 64
  Acinetobacter radioresistens SK82 MPMX26_02477 Dual-specificity RNA pseudouridine synthase RluA insig. 31 64
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13190 RluA family pseudouridine synthase insig. 29 69
  Acinetobacter baumannii LAC-4 RR41_RS18405 RluA family pseudouridine synthase insig. 34 68
  Pantoea sp. MT58 IAI47_07280 RluA family pseudouridine synthase insig. 29 67
  Pseudomonas fluorescens FW300-N2E3 AO353_02385 pseudouridine synthase no data 29 67
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5794 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) strong 29 67
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14415 pseudouridine synthase strong 31 67
  Dechlorosoma suillum PS Dsui_3205 pseudouridine synthase, RluA family insig. 33 67
  Azospirillum sp. SherDot2 MPMX19_05341 hypothetical protein insig. 32 63
  Shewanella loihica PV-4 Shew_1594 RluA family pseudouridine synthase (RefSeq) sig. 31 69
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3753 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) sig. 29 67
  Pseudomonas simiae WCS417 PS417_19475 pseudouridine synthase sig. 28 67
  Dinoroseobacter shibae DFL-12 Dshi_3106 pseudouridine synthase (RefSeq) insig. 35 55
  Klebsiella pneumoniae MRSN742743 KFA93_RS00230 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 32 68
  Klebsiella pneumoniae MKP103 KDGMDA_18660 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 31 68
  Shewanella sp. ANA-3 Shewana3_0799 ribosomal large subunit pseudouridine synthase A (RefSeq) insig. 31 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04097 Dual-specificity RNA pseudouridine synthase RluA cofit 28 67
  Enterobacter asburiae PDN3 EX28DRAFT_1359 Pseudouridylate synthases, 23S RNA-specific insig. 30 65
  Acidovorax sp. GW101-3H11 Ac3H11_174 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 32 64
  Magnetospirillum magneticum AMB-1 AMB_RS17255 RNA pseudouridine synthase insig. 31 55
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03255 pseudouridine synthase insig. 30 66
  Bacteroides ovatus ATCC 8483 BACOVA_02266 pseudouridine synthase, RluA family sig. 29 67
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07865 RluA family pseudouridine synthase cofit 31 67
  Pseudomonas stutzeri RCH2 Psest_2948 pseudouridine synthase, RluA family sig. 29 67
  Bacteroides thetaiotaomicron VPI-5482 BT0642 RNA pseudouridylate synthase (NCBI ptt file) sig. 29 67
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS12640 RluA family pseudouridine synthase strong 29 67
  Bacteroides stercoris CC31F HMPREF1181_RS16530 RluA family pseudouridine synthase insig. 29 67
  Azospirillum sp. SherDot2 MPMX19_03163 hypothetical protein insig. 29 63
  Pseudomonas orientalis W4I3 QF045_RS21620 RluA family pseudouridine synthase insig. 28 67
  Klebsiella michiganensis M5al BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase strong 32 67
  Pseudomonas fluorescens FW300-N2C3 AO356_19405 pseudouridine synthase insig. 29 67
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4194 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 28 67
  Shewanella amazonensis SB2B Sama_1988 pseudouridylate synthase (RefSeq) strong 33 56
  Pseudomonas aeruginosa MRSN321 DY961_RS02100 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 31 64
  Pseudomonas aeruginosa PA14 IKLFDK_15135 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 64
  Pseudomonas aeruginosa PUPa3 DQ20_RS33485 rluC;go_function=RNA 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 31 64
  Shewanella sp. ANA-3 Shewana3_1430 pseudouridine synthase (RefSeq) sig. 29 67
  Paraburkholderia sabiae LMG 24235 QEN71_RS04500 RluA family pseudouridine synthase cofit 30 67
  Pseudomonas sp. DMC3 GFF2599 Dual-specificity RNA pseudouridine synthase RluA insig. 29 67
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09185 RNA pseudouridine synthase no data 28 57
  Pseudomonas fluorescens SBW25 PFLU_RS21445 RluA family pseudouridine synthase insig. 28 67
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21445 RluA family pseudouridine synthase sig. 28 67
  Vibrio cholerae E7946 ATCC 55056 CSW01_12700 RNA pseudouridine synthase insig. 31 63
  Klebsiella michiganensis M5al BWI76_RS17615 RNA pseudouridine synthase insig. 29 68
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1362.1 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 28 86
  Erwinia tracheiphila SCR3 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 33 67
  Erwinia amylovora T8 OLJFJH_15565 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 32 68
  Caulobacter crescentus NA1000 CCNA_01343 ribosomal large subunit pseudouridine synthase C sig. 31 66
  Caulobacter crescentus NA1000 Δfur CCNA_01343 ribosomal large subunit pseudouridine synthase C cofit 31 66
  Azospirillum brasilense Sp245 AZOBR_RS31090 pseudouridine synthase insig. 31 63
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14830 RluA family pseudouridine synthase insig. 30 68
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17840 RluA family pseudouridine synthase insig. 29 68
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01385 RluA family pseudouridine synthase insig. 28 67
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08615 RluA family pseudouridine synthase strong 27 87
  Phocaeicola dorei CL03T12C01 ABI39_RS18705 RluA family pseudouridine synthase insig. 33 66
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1033 pseudouridine synthase, RluA family no data 30 65
  Azospirillum brasilense Sp245 AZOBR_RS08300 pseudouridine synthase insig. 29 63
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05180 RluA family pseudouridine synthase insig. 33 65
  Pectobacterium carotovorum WPP14 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 33 68
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00715 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 32 67
  Pseudomonas stutzeri RCH2 Psest_0709 pseudouridine synthase, RluA family strong 31 69
  Pseudomonas fluorescens FW300-N2E3 AO353_01405 23S rRNA pseudouridylate synthase strong 30 64
  Pseudomonas aeruginosa MRSN321 DY961_RS00685 RluA family pseudouridine synthase insig. 29 67
  Phocaeicola dorei CL03T12C01 ABI39_RS02845 RluA family pseudouridine synthase strong 27 87
  Pseudomonas syringae pv. syringae B728a Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 27 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1610 ribosomal large subunit pseudouridine synthase A insig. 27 66
  Caulobacter crescentus NA1000 CCNA_02059 ribosomal large subunit pseudouridine synthase C strong 31 64
  Caulobacter crescentus NA1000 Δfur CCNA_02059 ribosomal large subunit pseudouridine synthase C cofit 31 64
  Methylophilus sp. DMC18 GFF1213 Ribosomal large subunit pseudouridine synthase D insig. 30 55
  Pseudomonas sp. S08-1 OH686_19760 LSU rRNA pseudouridine(746) synthase or tRNA pseudouridine(32) synthase insig. 28 67
  Sphingobium sp. HT1-2 GFF3074 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) cofit 30 61
  Bacteroides thetaiotaomicron VPI-5482 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) strong 30 67
  Pseudomonas aeruginosa PUPa3 DQ20_RS40350 RluA family pseudouridine synthase insig. 29 67
  Synechococcus elongatus PCC 7942 Synpcc7942_1374 rluA ribosomal large subunit pseudouridine synthase D sig. 31 65
  Acidovorax sp. GW101-3H11 Ac3H11_1787 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) sig. 29 68
  Alteromonas macleodii MIT1002 MIT1002_00998 tRNA pseudouridine synthase C insig. 27 68
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3559 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) insig. 35 55
  Serratia liquefaciens MT49 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 32 67
  Phaeobacter inhibens DSM 17395 PGA1_c33080 ribosomal large subunit pseudouridine synthase A sig. 31 66
  Rhizobium sp. OAE497 ABIE40_RS09915 RluA family pseudouridine synthase sig. 30 68
  Pseudomonas aeruginosa PA14 IKLFDK_16600 RNA pseudouridine synthase sig. 29 67
  Pantoea sp. MT58 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 32 67
  Shewanella sp. ANA-3 Shewana3_2824 tRNA pseudouridine synthase C (RefSeq) insig. 31 65
  Rahnella sp. WP5 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC sig. 32 68
  Pseudomonas orientalis W4I3 QF045_RS23560 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 30 64
  Variovorax sp. SCN45 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) cofit 30 67
  Phocaeicola dorei CL03T12C01 ABI39_RS17485 RluA family pseudouridine synthase insig. 27 87
  Enterobacter sp. TBS_079 MPMX20_02187 Dual-specificity RNA pseudouridine synthase RluA insig. 26 65
  Lysobacter sp. OAE881 ABIE51_RS11800 RluA family pseudouridine synthase cofit 31 56
  Dickeya dianthicola ME23 DZA65_RS19315 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 31 55
  Dinoroseobacter shibae DFL-12 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) insig. 30 68
  Klebsiella pneumoniae MRSN742743 KFA93_RS11260 rluA;go_function=RNA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 29 67
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0642 pseudouridine synthase, RluA family strong 29 66
  Rahnella sp. WP5 EX31_RS17740 RluA family pseudouridine synthase insig. 29 67
  Burkholderia phytofirmans PsJN BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C sig. 28 67
  Pseudomonas putida KT2440 PP_0623 23S rRNA pseudouridine(1911,1915,1917) synthase no data 28 68
  Pseudomonas segetis P6 ACVTMO_RS15920 RluA family pseudouridine synthase insig. 26 67
  Fusobacterium nucleatum SB010 HUW76_08575 RluA family pseudouridine synthase strong 24 86
  Dickeya dianthicola ME23 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC insig. 29 65
  Pseudomonas segetis P6 ACVTMO_RS10270 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 31 64
  Enterobacter sp. TBS_079 MPMX20_00752 Dual-specificity RNA pseudouridine synthase RluA insig. 29 67
  Pseudomonas simiae WCS417 PS417_21480 23S rRNA pseudouridylate synthase strong 29 64
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) strong 29 64
  Shewanella loihica PV-4 Shew_2950 RluA family pseudouridine synthase (RefSeq) strong 27 74
  Shewanella loihica PV-4 Shew_1460 pseudouridine synthase (RefSeq) no data 27 54
  Desulfovibrio vulgaris Miyazaki F DvMF_0912 pseudouridine synthase, RluA family (RefSeq) no data 32 67
  Klebsiella pneumoniae MKP103 KDGMDA_12790 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 29 67
  Dickeya dianthicola 67-19 HGI48_RS05085 tRNA pseudouridine(65) synthase TruC insig. 29 65
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03065 RluA family pseudouridine synthase cofit 27 58
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05230 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 32 67
  Dickeya dianthicola 67-19 HGI48_RS18175 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 31 55
  Bacteroides thetaiotaomicron VPI-5482 BT4501 ribosomal large subunit pseudouridine synthase A (NCBI ptt file) insig. 31 68
  Bacteroides stercoris CC31F HMPREF1181_RS03250 RluA family pseudouridine synthase strong 30 70
  Bacteroides ovatus ATCC 8483 BACOVA_03528 pseudouridine synthase, RluA family strong 30 66
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) no data 29 64
  Bosea sp. OAE506 ABIE41_RS04835 RNA pseudouridine synthase insig. 32 59
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03985 RluA family pseudouridine synthase sig. 31 55
  Dechlorosoma suillum PS Dsui_2437 pseudouridine synthase, RluA family strong 31 67
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF184 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) cofit 30 67
  Enterobacter asburiae PDN3 EX28DRAFT_3650 pseudouridine synthase, RluA family insig. 29 67
  Phaeobacter inhibens DSM 17395 PGA1_c01950 ribosomal large subunit pseudouridine synthase C no data 28 67
  Pseudomonas sp. SVBP6 COO64_RS11055 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 28 68
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03715 RluA family pseudouridine synthase sig. 27 87
  Dickeya dianthicola 67-19 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 54
  Dickeya dianthicola ME23 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC insig. 33 54
  Dickeya dadantii 3937 DDA3937_RS18240 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 31 55
  Escherichia coli Nissle 1917 ECOLIN_RS00310 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 30 67
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_06080 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 30 67
  Escherichia fergusonii Becca EFB2_03987 Dual-specificity RNA pseudouridine synthase RluA insig. 30 67
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0664 pseudouridine synthase, RluA family strong 30 68
  Pseudomonas sp. BP01 JOY50_RS27130 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD sig. 28 68
  Shewanella amazonensis SB2B Sama_2197 pseudouridylate synthase (RefSeq) insig. 27 66
  Escherichia coli BL21 ECD_00060 dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM-dependent cofit 30 67
  Escherichia coli ECOR27 NOLOHH_03150 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 30 67
  Escherichia coli ECOR38 HEPCGN_08795 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 30 67
  Escherichia coli ECRC62 BNILDI_08455 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA cofit 30 67
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03600 Ribosomal large subunit pseudouridine synthase A insig. 30 67
  Escherichia coli BW25113 b0058 rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) (NCBI) sig. 30 67
  Pseudomonas fluorescens SBW25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC cofit 29 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC strong 29 64
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04440 Ribosomal large subunit pseudouridine synthase C cofit 29 64
  Dickeya dadantii 3937 DDA3937_RS05085 tRNA pseudouridine(65) synthase TruC insig. 28 65
  Klebsiella michiganensis M5al BWI76_RS04565 bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA sig. 29 67
  Paraburkholderia graminis OAS925 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase sig. 28 68
  Methanococcus maripaludis JJ MMJJ_RS09155 RluA family pseudouridine synthase insig. 25 67
  Shewanella sp. ANA-3 Shewana3_3171 ribosomal large subunit pseudouridine synthase D (RefSeq) strong 29 60
  Phaeobacter inhibens DSM 17395 PGA1_c09000 ribosomal large subunit pseudouridine synthase D strong 28 69
  Xanthobacter sp. DMC5 GFF3765 hypothetical protein insig. 31 54
  Pseudomonas sp. RS175 PFR28_03018 Ribosomal large subunit pseudouridine synthase C sig. 29 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) no data 27 68
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) sig. 32 56
  Dechlorosoma suillum PS Dsui_3127 23S RNA-specific pseudouridylate synthase insig. 31 54
  Agrobacterium fabrum C58 Atu1471 ribosomal large subunit pseudouridine synthase C no data 31 71
  Serratia liquefaciens MT49 IAI46_03270 bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA insig. 30 55
  Erwinia tracheiphila SCR3 LU632_RS02800 rluA bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA no data 30 67
  Pseudomonas sp. DMC3 GFF4004 Ribosomal large subunit pseudouridine synthase D cofit 28 68
  Pseudomonas sp. S08-1 OH686_16410 LSU rRNA pseudouridine(1911/1915/1917) synthase cofit 28 67
  Rhodopseudomonas palustris CGA009 TX73_016595 RluA family pseudouridine synthase insig. 27 85
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) cofit 31 54
  Magnetospirillum magneticum AMB-1 AMB_RS19265 RNA pseudouridine synthase cofit 30 63
  Dechlorosoma suillum PS Dsui_2530 pseudouridine synthase, RluA family sig. 28 69