Homologs of Atu1499 from Agrobacterium fabrum C58

penicillin binding protein
SEED: D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
KEGG: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu1499 penicillin binding protein strong 100 100
o Sinorhizobium meliloti 1021 SMc01188 penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein no data 56 97
o Rhizobium sp. OAE497 ABIE40_RS09505 D-alanyl-D-alanine carboxypeptidase family protein insig. 60 91
o Rhodopseudomonas palustris CGA009 TX73_014370 D-alanyl-D-alanine carboxypeptidase insig. 40 94
o Bosea sp. OAE506 ABIE41_RS15965 D-alanyl-D-alanine carboxypeptidase family protein no data 41 92
o Rhodospirillum rubrum S1H Rru_A1704 Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) no data 37 92
o Azospirillum brasilense Sp245 AZOBR_RS08775 D-alanyl-D-alanine carboxypeptidase no data 38 83
o Azospirillum sp. SherDot2 MPMX19_01465 D-alanyl-D-alanine carboxypeptidase DacC no data 36 95
o Pseudomonas sp. S08-1 OH686_09300 D-alanyl-D-alanine carboxypeptidase insig. 37 86
o Magnetospirillum magneticum AMB-1 AMB_RS12315 D-alanyl-D-alanine carboxypeptidase insig. 35 99
  Azospirillum sp. SherDot2 MPMX19_05873 D-alanyl-D-alanine carboxypeptidase DacA insig. 38 88
o Phaeobacter inhibens DSM 17395 PGA1_c08020 D-alanyl-D-alanine carboxypeptidase DacC no data 35 93
  Castellaniella sp019104865 MT123 ABCV34_RS13340 D-alanyl-D-alanine carboxypeptidase family protein cofit 36 84
o Pseudomonas putida KT2440 PP_4803 D-alanyl-D-alanine carboxypeptidase strong 34 92
o Pseudomonas stutzeri RCH2 Psest_0516 D-alanyl-D-alanine carboxypeptidase strong 33 88
o Dinoroseobacter shibae DFL-12 Dshi_0923 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) no data 35 88
o Dechlorosoma suillum PS Dsui_0899 D-alanyl-D-alanine carboxypeptidase strong 34 89
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0122 D-alanyl-D-alanine carboxypeptidase no data 34 88
o Pseudomonas fluorescens FW300-N2E3 AO353_06455 D-alanyl-D-alanine carboxypeptidase insig. 33 91
o Pseudomonas sp. RS175 PFR28_03864 D-alanyl-D-alanine carboxypeptidase DacC strong 33 91
o Pseudomonas fluorescens SBW25 PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase sig. 32 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26635 D-alanyl-D-alanine carboxypeptidase strong 32 94
o Pseudomonas syringae pv. syringae B728a Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 strong 33 94
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4361 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 sig. 33 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5001 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) sig. 33 91
o Pseudomonas simiae WCS417 PS417_24705 D-alanyl-D-alanine carboxypeptidase strong 33 87
o Pseudomonas fluorescens FW300-N2C3 AO356_15330 D-alanyl-D-alanine carboxypeptidase strong 33 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1364 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no data 34 87
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2696 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no data 33 91
o Marinobacter adhaerens HP15 HP15_608 serine-type D-Ala-D-Ala carboxypeptidase no data 32 92
o Kangiella aquimarina DSM 16071 B158DRAFT_0079 D-alanyl-D-alanine carboxypeptidase no data 31 92
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS17490 D-alanyl-D-alanine carboxypeptidase family protein no data 34 83
o Paraburkholderia sabiae LMG 24235 QEN71_RS01300 D-alanyl-D-alanine carboxypeptidase family protein cofit 31 89
o Paraburkholderia graminis OAS925 ABIE53_000626 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) strong 31 95
o Rhodanobacter denitrificans MT42 LRK55_RS06235 D-alanyl-D-alanine carboxypeptidase family protein no data 34 83
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS06490 D-alanyl-D-alanine carboxypeptidase strong 34 83
o Alteromonas macleodii MIT1002 MIT1002_01848 D-alanyl-D-alanine carboxypeptidase DacC precursor no data 32 96
o Rhodanobacter sp. FW510-T8 OKGIIK_00090 serine-type D-Ala-D-Ala carboxypeptidase no data 34 83
o Acidovorax sp. GW101-3H11 Ac3H11_2142 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no data 33 92
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02054 penicillin-binding protein 6. Serine peptidase. MEROPS family S11 cofit 31 90
o Burkholderia phytofirmans PsJN BPHYT_RS02415 cytochrome C550 strong 31 90
o Acinetobacter radioresistens SK82 MPMX26_01051 D-alanyl-D-alanine carboxypeptidase DacA strong 32 83
o Serratia liquefaciens MT49 IAI46_13850 serine-type D-Ala-D-Ala carboxypeptidase DacD insig. 32 88
  Variovorax sp. SCN45 GFF1728 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) insig. 34 84
o Shewanella oneidensis MR-1 SO1164 dacA-1 D-alanyl-D-alanine carboxypeptidase (NCBI ptt file) no data 30 92
o Rahnella sp. WP5 EX31_RS07145 serine hydrolase insig. 29 95
  Shewanella loihica PV-4 Shew_2939 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) strong 28 99
o Ralstonia solanacearum PSI07 RPSI07_RS22545 D-alanyl-D-alanine carboxypeptidase insig. 31 88
o Cupriavidus basilensis FW507-4G11 RR42_RS01680 cytochrome C550 strong 30 86
o Pantoea sp. MT58 IAI47_07170 serine-type D-Ala-D-Ala carboxypeptidase DacD insig. 30 96
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1806 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) cofit 31 92
o Shewanella sp. ANA-3 Shewana3_0991 penicillin-binding protein 6 (RefSeq) insig. 30 92
o Herbaspirillum seropedicae SmR1 HSERO_RS21530 cytochrome C550 strong 32 94
  Variovorax sp. OAS795 ABID97_RS00695 D-alanyl-D-alanine carboxypeptidase family protein sig. 30 91
o Ralstonia solanacearum GMI1000 RS_RS01610 D-alanyl-D-alanine carboxypeptidase insig. 31 85
o Ralstonia sp. UNC404CL21Col ABZR87_RS06610 D-alanyl-D-alanine carboxypeptidase family protein strong 30 92
  Variovorax sp. SCN45 GFF3627 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) cofit 30 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_04845 D-alanyl-D-alanine carboxypeptidase strong 31 96
o Enterobacter sp. TBS_079 MPMX20_02996 D-alanyl-D-alanine carboxypeptidase DacD insig. 30 88
  Shewanella amazonensis SB2B Sama_2592 Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) no data 29 100
o Enterobacter asburiae PDN3 EX28DRAFT_2127 D-alanyl-D-alanine carboxypeptidase insig. 32 85
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3923 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) insig. 31 85
o Escherichia coli BW25113 b2010 dacD penicillin binding protein 6b (VIMSS) insig. 29 94
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10770 D-alanyl-D-alanine carboxypeptidase insig. 30 87
o Ralstonia solanacearum UW163 UW163_RS02810 D-alanyl-D-alanine carboxypeptidase insig. 30 87
o Escherichia coli ECRC62 BNILDI_14795 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD insig. 28 94
o Dickeya dianthicola 67-19 HGI48_RS09435 serine hydrolase insig. 33 88
  Enterobacter asburiae PDN3 EX28DRAFT_0546 D-alanyl-D-alanine carboxypeptidase insig. 30 88
  Enterobacter sp. TBS_079 MPMX20_01477 D-alanyl-D-alanine carboxypeptidase DacC insig. 32 85
o Escherichia coli ECOR38 HEPCGN_03275 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD cofit 28 94
o Klebsiella michiganensis M5al BWI76_RS18780 D-alanyl-D-alanine carboxypeptidase insig. 29 94
o Escherichia fergusonii Becca EFB2_01846 D-alanyl-D-alanine carboxypeptidase DacD insig. 28 94
o Escherichia coli ECOR27 NOLOHH_15895 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD cofit 28 94
o Escherichia coli Nissle 1917 ECOLIN_RS11905 serine-type D-Ala-D-Ala carboxypeptidase DacD no data 28 94
  Escherichia coli ECOR27 NOLOHH_22410 dacC serine-type D-Ala-D-Ala carboxypeptidase cofit 32 92
  Escherichia coli ECOR38 HEPCGN_01990 dacC serine-type D-Ala-D-Ala carboxypeptidase cofit 32 92
  Escherichia coli ECRC101 OKFHMN_06040 dacC serine-type D-Ala-D-Ala carboxypeptidase insig. 32 92
  Escherichia coli ECRC101 MCAODC_25255 dacC serine-type D-Ala-D-Ala carboxypeptidase insig. 32 92
  Escherichia coli ECRC102 NIAGMN_04085 dacC serine-type D-Ala-D-Ala carboxypeptidase insig. 32 92
  Escherichia coli ECRC62 BNILDI_20670 dacC serine-type D-Ala-D-Ala carboxypeptidase insig. 32 92
  Escherichia coli ECRC98 JDDGAC_09675 dacC serine-type D-Ala-D-Ala carboxypeptidase no data 32 92
  Escherichia coli ECRC99 KEDOAH_21870 dacC serine-type D-Ala-D-Ala carboxypeptidase no data 32 92
  Escherichia coli Nissle 1917 ECOLIN_RS04460 serine-type D-Ala-D-Ala carboxypeptidase no data 32 92
o Escherichia coli ECRC101 OKFHMN_25015 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD insig. 28 94
o Escherichia coli ECRC101 MCAODC_20370 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD insig. 28 94
o Escherichia coli ECRC102 NIAGMN_22515 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD insig. 28 94
o Escherichia coli ECRC98 JDDGAC_29140 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD no data 28 94
o Escherichia coli ECRC99 KEDOAH_03100 dacD serine-type D-Ala-D-Ala carboxypeptidase DacD no data 28 94
o Escherichia coli BL21 ECD_01913 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6b insig. 28 94
  Escherichia fergusonii Becca EFB2_03267 D-alanyl-D-alanine carboxypeptidase DacC insig. 32 92
  Escherichia coli BL21 ECD_00806 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6a insig. 32 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02871 D-alanyl-D-alanine carboxypeptidase DacC insig. 32 92
  Escherichia coli BW25113 b0839 dacC D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) (NCBI) insig. 32 92
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01690 D-alanyl-D-alanine carboxypeptidase DacD cofit 28 94
  Pantoea sp. MT58 IAI47_13090 serine hydrolase insig. 31 94
o Dickeya dadantii 3937 DDA3937_RS09420 serine hydrolase insig. 33 88
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF744 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) insig. 33 85
o Dickeya dianthicola ME23 DZA65_RS09745 D-alanyl-D-alanine carboxypeptidase insig. 32 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_15300 D-alanyl-D-alanine carboxypeptidase insig. 29 89
o Lysobacter sp. OAE881 ABIE51_RS03165 D-alanyl-D-alanine carboxypeptidase family protein strong 29 89