Homologs of dapF from Shewanella amazonensis SB2B

dapF: diaminopimelate epimerase (RefSeq)
SEED: Diaminopimelate epimerase (EC 5.1.1.7)
KEGG: diaminopimelate epimerase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_3249 dapF diaminopimelate epimerase (RefSeq) no data 100 100
o Shewanella sp. ANA-3 Shewana3_0391 dapF diaminopimelate epimerase (RefSeq) no data 87 100
o Shewanella oneidensis MR-1 SO4308 dapF diaminopimelate epimerase (NCBI ptt file) no data 86 100
o Shewanella loihica PV-4 Shew_0323 dapF diaminopimelate epimerase (RefSeq) no data 85 100
o Alteromonas macleodii MIT1002 MIT1002_00159 Diaminopimelate epimerase no data 69 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_00640 diaminopimelate epimerase no data 70 99
o Klebsiella pneumoniae MKP103 KDGMDA_09690 diaminopimelate epimerase strong 68 100
o Enterobacter asburiae PDN3 EX28DRAFT_4478 diaminopimelate epimerase (EC 5.1.1.7) strong 68 100
o Enterobacter sp. TBS_079 MPMX20_04467 Diaminopimelate epimerase strong 68 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF237 Diaminopimelate epimerase (EC 5.1.1.7) no data 68 100
o Erwinia amylovora T8 OLJFJH_06405 diaminopimelate epimerase no data 68 100
o Escherichia coli BL21 ECD_03685 diaminopimelate epimerase strong 68 100
o Escherichia fergusonii Becca EFB2_04828 Diaminopimelate epimerase no data 68 100
o Escherichia coli ECOR27 NOLOHH_06560 dapF diaminopimelate epimerase no data 68 100
o Escherichia coli ECOR38 HEPCGN_13135 dapF diaminopimelate epimerase no data 68 100
o Escherichia coli ECRC100 OKFHMN_14430 dapF diaminopimelate epimerase no data 68 100
o Escherichia coli ECRC101 MCAODC_04935 dapF diaminopimelate epimerase no data 68 100
o Escherichia coli ECRC102 NIAGMN_12185 dapF diaminopimelate epimerase no data 68 100
o Escherichia coli ECRC62 BNILDI_04975 dapF diaminopimelate epimerase no data 68 100
o Escherichia coli ECRC98 JDDGAC_18055 dapF diaminopimelate epimerase no data 68 100
o Escherichia coli ECRC99 KEDOAH_13720 dapF diaminopimelate epimerase no data 68 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04241 Diaminopimelate epimerase no data 68 100
o Escherichia coli BW25113 b3809 dapF diaminopimelate epimerase (VIMSS) no data 68 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_08790 dapF diaminopimelate epimerase no data 68 100
o Erwinia tracheiphila SCR3 LU632_RS24145 dapF diaminopimelate epimerase no data 68 100
o Escherichia coli Nissle 1917 ECOLIN_RS21865 diaminopimelate epimerase no data 68 100
o Rahnella sp. WP5 EX31_RS15155 diaminopimelate epimerase insig. 67 100
o Serratia liquefaciens MT49 IAI46_00715 diaminopimelate epimerase no data 68 100
o Pantoea sp. MT58 IAI47_18410 diaminopimelate epimerase strong 68 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15390 diaminopimelate epimerase cofit 68 100
o Dickeya dianthicola ME23 DZA65_RS21100 diaminopimelate epimerase no data 67 100
o Dickeya dianthicola 67-19 HGI48_RS20055 diaminopimelate epimerase no data 67 100
o Dickeya dadantii 3937 DDA3937_RS19900 diaminopimelate epimerase no data 66 100
o Pectobacterium carotovorum WPP14 HER17_RS01340 diaminopimelate epimerase no data 66 100
o Klebsiella michiganensis M5al BWI76_RS01200 diaminopimelate epimerase strong 69 100
o Marinobacter adhaerens HP15 HP15_248 diaminopimelate epimerase no data 60 100
o Dechlorosoma suillum PS Dsui_0649 diaminopimelate epimerase no data 58 100
o Kangiella aquimarina DSM 16071 B158DRAFT_0246 diaminopimelate epimerase (EC 5.1.1.7) no data 54 100
o Pseudomonas aeruginosa PA14 IKLFDK_27060 diaminopimelate epimerase no data 58 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05655 Diaminopimelate epimerase strong 56 100
o Pseudomonas stutzeri RCH2 Psest_3765 diaminopimelate epimerase no data 57 100
o Methylophilus sp. DMC18 GFF1537 Diaminopimelate epimerase no data 57 100
o Pseudomonas simiae WCS417 PS417_27585 diaminopimelate epimerase sig. 56 100
o Pseudomonas sp. S08-1 OH686_13795 diaminopimelate epimerase no data 57 100
o Herbaspirillum seropedicae SmR1 HSERO_RS21455 diaminopimelate epimerase no data 54 100
o Pseudomonas sp. RS175 PFR28_04376 Diaminopimelate epimerase no data 56 100
o Pseudomonas fluorescens SBW25 PFLU_RS29270 diaminopimelate epimerase sig. 56 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29270 diaminopimelate epimerase no data 56 100
o Pseudomonas fluorescens FW300-N2E3 AO353_09040 diaminopimelate epimerase sig. 56 100
o Pseudomonas sp. DMC3 GFF368 Diaminopimelate epimerase no data 56 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2173 Diaminopimelate epimerase (EC 5.1.1.7) strong 56 100
o Pseudomonas fluorescens FW300-N2C3 AO356_12735 diaminopimelate epimerase sig. 57 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10065 diaminopimelate epimerase no data 52 100
o Ralstonia solanacearum PSI07 RPSI07_RS23305 diaminopimelate epimerase no data 52 100
o Ralstonia solanacearum UW163 UW163_RS03515 diaminopimelate epimerase no data 52 100
o Pseudomonas sp. SVBP6 COO64_RS01260 dapF diaminopimelate epimerase no data 56 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_844 Diaminopimelate epimerase (EC 5.1.1.7) insig. 56 100
o Pseudomonas sp. BP01 JOY50_RS22600 dapF diaminopimelate epimerase no data 56 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4418 Diaminopimelate epimerase (EC 5.1.1.7) sig. 56 100
o Pseudomonas putida KT2440 PP_5228 diaminopimelate epimerase no data 56 100
o Cupriavidus basilensis FW507-4G11 RR42_RS01250 diaminopimelate epimerase no data 53 100
o Pseudomonas segetis P6 MPMX49_04534 Diaminopimelate epimerase no data 56 100
o Acinetobacter baumannii LAC-4 RR41_RS04440 diaminopimelate epimerase no data 56 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02200 diaminopimelate epimerase no data 52 100
o Paraburkholderia graminis OAS925 ABIE53_000428 diaminopimelate epimerase no data 51 100
o Burkholderia phytofirmans PsJN BPHYT_RS01665 diaminopimelate epimerase no data 51 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS05580 diaminopimelate epimerase sig. 51 100
o Pseudomonas syringae pv. syringae B728a Psyr_0183 diaminopimelate epimerase no data 55 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0183 diaminopimelate epimerase no data 55 100
o Acinetobacter radioresistens SK82 MPMX26_02231 Diaminopimelate epimerase no data 56 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS00365 diaminopimelate epimerase no data 51 100
o Ralstonia solanacearum GMI1000 RS_RS00675 diaminopimelate epimerase no data 53 100
o Variovorax sp. SCN45 GFF4493 Diaminopimelate epimerase (EC 5.1.1.7) no data 50 100
o Variovorax sp. OAS795 ABID97_RS06135 diaminopimelate epimerase no data 49 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15015 diaminopimelate epimerase no data 48 99
o Acidovorax sp. GW101-3H11 Ac3H11_1993 Diaminopimelate epimerase (EC 5.1.1.7) no data 49 98
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF545 Diaminopimelate epimerase (EC 5.1.1.7) no data 48 100
o Rhodanobacter sp. FW510-T8 OKGIIK_15335 dapF diaminopimelate epimerase no data 48 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02325 diaminopimelate epimerase no data 47 99
o Castellaniella sp019104865 MT123 ABCV34_RS13465 diaminopimelate epimerase no data 51 99
o Rhodanobacter denitrificans MT42 LRK55_RS08310 diaminopimelate epimerase no data 48 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08545 diaminopimelate epimerase no data 47 99
o Methanococcus maripaludis S2 MMP_RS04760 diaminopimelate epimerase no data 41 100
o Methanococcus maripaludis JJ MMJJ_RS00375 diaminopimelate epimerase no data 41 100
o Synechococcus elongatus PCC 7942 Synpcc7942_1927 dapF diaminopimelate epimerase no data 41 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.845.1 Diaminopimelate epimerase (EC 5.1.1.7) no data 48 99
o Synechocystis sp000284455 PCC 6803 SGL_RS17890 diaminopimelate epimerase no data 42 100
o Bacteroides thetaiotaomicron VPI-5482 BT0548 diaminopimelate epimerase (NCBI ptt file) cofit 40 99
o Bacteroides stercoris CC31F HMPREF1181_RS16035 diaminopimelate epimerase insig. 39 99
o Lysobacter sp. OAE881 ABIE51_RS03025 diaminopimelate epimerase no data 46 99
o Bacteroides ovatus ATCC 8483 BACOVA_03762 diaminopimelate epimerase strong 41 99
o Azospirillum brasilense Sp245 AZOBR_RS14160 diaminopimelate epimerase no data 40 99
o Phaeobacter inhibens DSM 17395 PGA1_c33950 diaminopimelate epimerase DapF no data 41 98
o Azospirillum sp. SherDot2 MPMX19_00602 Diaminopimelate epimerase no data 38 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS01230 diaminopimelate epimerase insig. 38 100
o Phocaeicola dorei CL03T12C01 ABI39_RS14295 diaminopimelate epimerase cofit 38 100
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13290 diaminopimelate epimerase no data 42 96
o Sphingobium sp. HT1-2 GFF316 Diaminopimelate epimerase (EC 5.1.1.7) no data 41 99
o Dinoroseobacter shibae DFL-12 Dshi_3228 Diaminopimelate epimerase (RefSeq) no data 39 99
o Caulobacter crescentus NA1000 CCNA_03800 diaminopimelate epimerase no data 40 98