Homologs of rpoA from Desulfovibrio vulgaris Hildenborough JW710

rpoA: DNA-directed RNA polymerase, alpha subunit (TIGR)
SEED: DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6)
KEGG: DNA-directed RNA polymerase subunit alpha

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU1329 rpoA DNA-directed RNA polymerase, alpha subunit (TIGR) no data 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_0105 DNA-directed RNA polymerase subunit alpha (RefSeq) no data 88 100
o Caulobacter crescentus NA1000 CCNA_01330 DNA-directed RNA polymerase alpha chain no data 50 92
o Caulobacter crescentus NA1000 Δfur CCNA_01330 DNA-directed RNA polymerase alpha chain no data 50 92
o Agrobacterium fabrum C58 Atu1923 DNA-directed RNA polymerase alpha subunit no data 50 92
o Sinorhizobium meliloti 1021 SMc01285 DNA-directed RNA polymerase subunit alpha no data 50 92
o Rhodopseudomonas palustris CGA009 TX73_016685 DNA-directed RNA polymerase subunit alpha no data 50 92
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04035 DNA-directed RNA polymerase subunit alpha no data 50 92
o Sphingobium sp. HT1-2 GFF3193 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) no data 48 97
o Rhizobium sp. OAE497 ABIE40_RS07975 DNA-directed RNA polymerase subunit alpha no data 49 92
o Dinoroseobacter shibae DFL-12 Dshi_0309 DNA-directed RNA polymerase, alpha subunit (RefSeq) no data 51 91
o Rhodospirillum rubrum S1H Rru_A2664 DNA-directed RNA polymerase, alpha subunit (NCBI) no data 50 92
o Xanthobacter sp. DMC5 GFF1354 DNA-directed RNA polymerase subunit alpha no data 48 96
o Phaeobacter inhibens DSM 17395 PGA1_c01900 DNA-directed RNA polymerase subunit alpha no data 49 92
o Azospirillum sp. SherDot2 MPMX19_01533 DNA-directed RNA polymerase subunit alpha no data 48 97
o Magnetospirillum magneticum AMB-1 AMB_RS15650 DNA-directed RNA polymerase subunit alpha no data 47 97
o Azospirillum brasilense Sp245 AZOBR_RS06860 DNA-directed RNA polymerase subunit alpha no data 48 97
o Bosea sp. OAE506 ABIE41_RS14670 DNA-directed RNA polymerase subunit alpha no data 48 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_4177 DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type no data 46 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS21785 DNA-directed RNA polymerase subunit alpha no data 48 86
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2831 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) no data 45 91
o Castellaniella sp019104865 MT123 ABCV34_RS11300 DNA-directed RNA polymerase subunit alpha no data 45 91
o Rhodanobacter denitrificans MT42 LRK55_RS03205 DNA-directed RNA polymerase subunit alpha no data 48 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS03455 DNA-directed RNA polymerase subunit alpha no data 48 86
o Rhodanobacter sp. FW510-T8 OKGIIK_10345 rpoA DNA-directed RNA polymerase subunit alpha no data 48 86
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS06490 DNA-directed RNA polymerase subunit alpha no data 47 86
o Lysobacter sp. OAE881 ABIE51_RS05960 DNA-directed RNA polymerase subunit alpha no data 49 86
o Acidovorax sp. GW101-3H11 Ac3H11_813 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) no data 44 91
o Variovorax sp. OAS795 ABID97_RS01470 DNA-directed RNA polymerase subunit alpha no data 43 91
o Variovorax sp. SCN45 GFF5570 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) no data 43 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4115.1 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) no data 47 86
o Burkholderia phytofirmans PsJN BPHYT_RS17985 DNA-directed RNA polymerase subunit alpha no data 44 91
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05595 DNA-directed RNA polymerase subunit alpha no data 44 91
o Paraburkholderia graminis OAS925 ABIE53_003760 DNA-directed RNA polymerase subunit alpha no data 44 91
o Cupriavidus basilensis FW507-4G11 RR42_RS19125 DNA-directed RNA polymerase subunit alpha no data 44 92
o Herbaspirillum seropedicae SmR1 HSERO_RS00700 DNA-directed RNA polymerase subunit alpha no data 44 91
o Paraburkholderia sabiae LMG 24235 QEN71_RS28135 DNA-directed RNA polymerase subunit alpha no data 44 91
o Dechlorosoma suillum PS Dsui_0333 DNA-directed RNA polymerase, alpha subunit no data 43 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07060 DNA-directed RNA polymerase subunit alpha no data 44 92
o Ralstonia solanacearum UW163 UW163_RS06555 DNA-directed RNA polymerase subunit alpha no data 44 92
o Kangiella aquimarina DSM 16071 B158DRAFT_1901 DNA-directed RNA polymerase subunit alpha (EC 2.7.7.6) no data 42 91
o Ralstonia sp. UNC404CL21Col ABZR87_RS02710 DNA-directed RNA polymerase subunit alpha no data 44 92
o Ralstonia solanacearum PSI07 RPSI07_RS10180 DNA-directed RNA polymerase subunit alpha no data 43 92
o Methylophilus sp. DMC18 GFF1621 DNA-directed RNA polymerase subunit alpha no data 42 92
o Ralstonia solanacearum GMI1000 RS_RS15000 DNA-directed RNA polymerase subunit alpha no data 43 92
o Marinobacter adhaerens HP15 HP15_404 DNA-directed RNA polymerase subunit alpha no data 43 87
o Pseudomonas sp. BP01 JOY50_RS20325 DNA-directed RNA polymerase subunit alpha no data 42 91
o Pseudomonas putida KT2440 PP_0479 DNA-directed RNA polymerase subunit alpha no data 42 91
o Pseudomonas sp. DMC3 GFF3788 DNA-directed RNA polymerase subunit alpha no data 42 91
o Pseudomonas fluorescens SBW25 PFLU_RS27045 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS27045 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05198 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas sp. RS175 PFR28_03978 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas sp. SVBP6 COO64_RS16095 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas orientalis W4I3 QF045_RS27435 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas simiae WCS417 PS417_25415 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2607 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) no data 41 91
o Pseudomonas fluorescens FW300-N2C3 AO356_14765 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4884 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) no data 41 91
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1279 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) no data 41 91
o Pseudomonas aeruginosa MRSN321 DY961_RS29425 rpoA;go_function=DNA DNA-directed RNA polymerase subunit alpha no data 42 91
o Pseudomonas aeruginosa PA14 IKLFDK_21815 DNA-directed RNA polymerase subunit alpha no data 42 91
o Pseudomonas aeruginosa PUPa3 DQ20_RS43750 rpoA;go_function=DNA DNA-directed RNA polymerase subunit alpha no data 42 91
o Pseudomonas fluorescens FW300-N2E3 AO353_06875 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas stutzeri RCH2 Psest_3580 DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type no data 42 91
o Pseudomonas sp. S08-1 OH686_15480 DNA-directed RNA polymerase, alpha subunit no data 41 91
o Pseudomonas syringae pv. syringae B728a Psyr_4524 DNA-directed RNA polymerase subunit alpha no data 41 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4524 DNA-directed RNA polymerase subunit alpha no data 41 91
o Bifidobacterium breve UCC2003 BBR_RS18805 DNA-directed RNA polymerase subunit alpha no data 42 86
o Pseudomonas segetis P6 ACVTMO_RS04765 DNA-directed RNA polymerase subunit alpha no data 41 91
o Alteromonas macleodii MIT1002 MIT1002_03585 DNA-directed RNA polymerase subunit alpha no data 41 91
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16850 DNA-directed RNA polymerase subunit alpha no data 42 87
o Acinetobacter baumannii LAC-4 RR41_RS02285 DNA-directed RNA polymerase subunit alpha no data 42 93
o Shewanella amazonensis SB2B Sama_0238 DNA-directed RNA polymerase subunit alpha (RefSeq) no data 40 91
o Mycobacterium tuberculosis H37Rv Rv3457c Probable DNA-directed RNA polymerase (alpha chain) RpoA (transcriptase alpha chain) (RNA polymerase alpha subunit) (DNA-directed RNA nucleotidyltransferase) no data 42 86
o Acinetobacter radioresistens SK82 MPMX26_02696 DNA-directed RNA polymerase subunit alpha no data 42 93
o Bacteroides ovatus ATCC 8483 BACOVA_01001 DNA-directed RNA polymerase, alpha subunit no data 40 87
o Bacteroides stercoris CC31F HMPREF1181_RS00395 DNA-directed RNA polymerase subunit alpha no data 40 87
o Bacteroides thetaiotaomicron VPI-5482 BT2701 DNA-directed RNA polymerase alpha chain (NCBI ptt file) no data 40 87
o Shewanella loihica PV-4 Shew_0183 DNA-directed RNA polymerase subunit alpha (RefSeq) no data 39 91
o Shewanella sp. ANA-3 Shewana3_0224 DNA-directed RNA polymerase subunit alpha (RefSeq) no data 39 91
o Shewanella oneidensis MR-1 SO0256 rpoA DNA-directed RNA polymerase, alpha subunit (NCBI ptt file) no data 39 91
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0228 DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type no data 40 90
o Vibrio cholerae E7946 ATCC 55056 CSW01_13015 DNA-directed RNA polymerase subunit alpha no data 41 91
o Phocaeicola dorei CL03T12C01 ABI39_RS03600 DNA-directed RNA polymerase subunit alpha no data 40 87
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09215 DNA-directed RNA polymerase subunit alpha no data 40 87
o Escherichia coli BL21 ECD_03146 RNA polymerase, alpha subunit no data 40 91
o Escherichia fergusonii Becca EFB2_00528 DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli ECOR27 NOLOHH_09285 rpoA DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli ECOR38 HEPCGN_16315 rpoA DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli ECRC100 OKFHMN_17485 rpoA DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli ECRC101 MCAODC_08015 rpoA DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli ECRC102 NIAGMN_15255 rpoA DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli ECRC62 BNILDI_02235 rpoA DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli ECRC98 JDDGAC_21115 rpoA DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli ECRC99 KEDOAH_10655 rpoA DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00408 DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli Nissle 1917 ECOLIN_RS18910 DNA-directed RNA polymerase subunit alpha no data 40 91
o Escherichia coli BW25113 b3295 rpoA DNA-directed RNA polymerase subunit alpha (NCBI) no data 40 91
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2384 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) no data 40 91