| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.3403.1 | | Fumarate hydratase class II (EC 4.2.1.2) | 1.0 | Xcc-8004.4398.1 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | 0.49 | 1 |
| Lysobacter sp. OAE881 | 0.77 | ABIE51_RS09015 | | class II fumarate hydratase | 0.86 | ABIE51_RS04620 | | serine hydroxymethyltransferase | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.71 | OKGIIK_06345 | aspA | aspartate ammonia-lyase | 0.83 | OKGIIK_11440 | glyA | serine hydroxymethyltransferase | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.70 | LRK55_RS00660 | | class II fumarate hydratase | 0.84 | LRK55_RS04400 | | serine hydroxymethyltransferase | 0.56 | 59 |
| Rhodanobacter denitrificans FW104-10B01 | 0.70 | LRK54_RS00885 | | class II fumarate hydratase | 0.84 | LRK54_RS04625 | | serine hydroxymethyltransferase | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.70 | ABZR86_RS05855 | | class II fumarate hydratase | 0.84 | ABZR86_RS10715 | | serine hydroxymethyltransferase | low | > 74 |
| Pseudomonas simiae WCS417 | 0.60 | PS417_04305 | | aspartate ammonia-lyase | 0.76 | PS417_24280 | | serine hydroxymethyltransferase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.60 | CSW01_07895 | | class II fumarate hydratase | 0.69 | CSW01_04820 | | serine hydroxymethyltransferase | low | > 62 |
| Pseudomonas fluorescens GW456-L13 | 0.59 | PfGW456L13_5022 | | Fumarate hydratase class II (EC 4.2.1.2) | 0.75 | PfGW456L13_1451 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.58 | Pf1N1B4_1088 | | Fumarate hydratase class II (EC 4.2.1.2) | 0.76 | Pf1N1B4_2778 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS04360 | | class II fumarate hydratase | 0.76 | PFLU_RS26195 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas putida KT2440 | 0.58 | PP_0944 | | fumarate hydratase (class 2) | 0.76 | PP_0671 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS04360 | | class II fumarate hydratase | 0.76 | PFLU_RS26195 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas sp. RS175 | 0.58 | PFR28_00165 | | Fumarate hydratase class II | 0.75 | PFR28_03786 | | Serine hydroxymethyltransferase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.57 | AO356_07075 | | aspartate ammonia-lyase | 0.75 | AO356_15725 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.57 | Pf6N2E2_3276 | | Fumarate hydratase class II (EC 4.2.1.2) | 0.75 | Pf6N2E2_5082 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Shewanella amazonensis SB2B | 0.56 | Sama_0822 | | fumarate hydratase (RefSeq) | 0.75 | Sama_1014 | glyA | serine hydroxymethyltransferase (RefSeq) | low | > 62 |
| Marinobacter adhaerens HP15 | 0.56 | HP15_3132 | | fumarate hydratase class II | 0.75 | HP15_489 | | glycine hydroxymethyltransferase | — | — |
| Shewanella loihica PV-4 | 0.55 | Shew_0068 | | fumarate lyase (RefSeq) | 0.75 | Shew_1185 | glyA | serine hydroxymethyltransferase (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.53 | MIT1002_03167 | | Fumarate hydratase class II | 0.70 | MIT1002_02702 | | Serine hydroxymethyltransferase | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.49 | B158DRAFT_1200 | | fumarase, class II (EC 4.2.1.2) | 0.70 | B158DRAFT_1908 | | Glycine/serine hydroxymethyltransferase | low | > 40 |
| Mycobacterium tuberculosis H37Rv | 0.48 | Rv1098c | | Probable fumarase Fum (fumarate hydratase) | 0.54 | Rv0070c | | Serine hydroxymethyltransferase GlyA2 (serine methylase 2) (SHMT 2) | — | — |
| Acinetobacter radioresistens SK82 | 0.48 | MPMX26_01446 | | Fumarate hydratase class II | 0.73 | MPMX26_02049 | | Serine hydroxymethyltransferase | — | — |
| Escherichia coli Nissle 1917 | 0.46 | ECOLIN_RS08995 | | class II fumarate hydratase | 0.70 | ECOLIN_RS14440 | | serine hydroxymethyltransferase | — | — |
| Escherichia fergusonii Becca | 0.46 | EFB2_02381 | | Fumarate hydratase class II | 0.70 | EFB2_01345 | | Serine hydroxymethyltransferase | — | — |
| Escherichia coli ECOR27 | 0.46 | NOLOHH_18155 | fumC | class II fumarate hydratase | 0.70 | NOLOHH_13185 | glyA | serine hydroxymethyltransferase | low | > 75 |
| Escherichia coli ECOR38 | 0.46 | HEPCGN_06025 | fumC | class II fumarate hydratase | 0.70 | HEPCGN_20655 | glyA | serine hydroxymethyltransferase | low | > 87 |
| Escherichia coli BL21 | 0.46 | ECD_01580 | | fumarate hydratase (fumarase C),aerobic Class II | 0.70 | ECD_02443 | | serine hydroxymethyltransferase | — | — |
| Escherichia coli ECRC62 | 0.45 | BNILDI_16945 | fumC | class II fumarate hydratase | 0.70 | BNILDI_11985 | glyA | serine hydroxymethyltransferase | low | > 75 |
| Escherichia coli ECRC99 | 0.45 | KEDOAH_00455 | fumC | class II fumarate hydratase | 0.70 | KEDOAH_06710 | glyA | serine hydroxymethyltransferase | — | — |
| Escherichia coli ECRC101 | 0.45 | MCAODC_17760 | fumC | class II fumarate hydratase | 0.70 | MCAODC_12040 | glyA | serine hydroxymethyltransferase | low | > 87 |
| Escherichia coli ECRC98 | 0.45 | JDDGAC_02240 | fumC | class II fumarate hydratase | 0.70 | JDDGAC_25175 | glyA | serine hydroxymethyltransferase | — | — |
| Escherichia coli ECRC102 | 0.45 | NIAGMN_00425 | fumC | class II fumarate hydratase | 0.70 | NIAGMN_19280 | glyA | serine hydroxymethyltransferase | — | — |
| Escherichia coli BW25113 | 0.45 | b1611 | fumC | fumarate hydratase (NCBI) | 0.70 | b2551 | glyA | serine hydroxymethyltransferase (NCBI) | — | — |
| Escherichia coli ECRC100 | 0.45 | OKFHMN_27650 | fumC | class II fumarate hydratase | 0.70 | OKFHMN_21510 | glyA | serine hydroxymethyltransferase | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.45 | OHPLBJKB_02115 | | Fumarate hydratase class II | 0.70 | OHPLBJKB_01156 | | Serine hydroxymethyltransferase | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS05900 | | class II fumarate hydratase | 0.65 | RPSI07_RS20330 | | serine hydroxymethyltransferase | low | > 81 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_04314 | | fumarase, class II | 0.65 | H281DRAFT_04726 | | serine hydroxymethyltransferase | — | — |
| Sinorhizobium meliloti 1021 | 0.45 | SMc00149 | | fumarate hydratase | 0.60 | SMc01770 | | serine hydroxymethyltransferase | — | — |
| Paraburkholderia graminis OAS925 | 0.44 | ABIE53_003084 | | fumarate hydratase class II | 0.65 | ABIE53_000888 | | glycine hydroxymethyltransferase | — | — |
| Enterobacter asburiae PDN3 | 0.44 | EX28DRAFT_1608 | | fumarase, class II (EC 4.2.1.2) | 0.70 | EX28DRAFT_0099 | | Glycine/serine hydroxymethyltransferase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS17680 | | class II fumarate hydratase | 0.66 | RALBFv3_RS12895 | | serine hydroxymethyltransferase | — | — |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS21470 | | class II fumarate hydratase | 0.66 | UW163_RS00670 | | serine hydroxymethyltransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS18630 | | class II fumarate hydratase | 0.67 | ABZR87_RS08955 | | serine hydroxymethyltransferase | — | — |
| Klebsiella michiganensis M5al | 0.44 | BWI76_RS16270 | | fumarate hydratase, class II | 0.70 | BWI76_RS21225 | | serine hydroxymethyltransferase | — | — |
| Serratia liquefaciens MT49 | 0.44 | IAI46_11655 | | class II fumarate hydratase | 0.71 | IAI46_19395 | | serine hydroxymethyltransferase | — | — |
| Ralstonia solanacearum GMI1000 | 0.44 | RS_RS23320 | | class II fumarate hydratase | 0.66 | RS_RS03670 | | serine hydroxymethyltransferase | — | — |
| Rahnella sp. WP5 | 0.44 | EX31_RS06965 | | class II fumarate hydratase | 0.72 | EX31_RS20585 | | serine hydroxymethyltransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.44 | TX73_018130 | | class II fumarate hydratase | 0.58 | TX73_014115 | | serine hydroxymethyltransferase | — | — |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_01424 | | Fumarate hydratase class II | 0.58 | MPMX19_00727 | | Serine hydroxymethyltransferase 2 | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.44 | Ga0059261_1040 | | fumarase, class II (EC 4.2.1.2) | 0.54 | Ga0059261_1986 | | Glycine/serine hydroxymethyltransferase | low | > 68 |
| Enterobacter sp. TBS_079 | 0.44 | MPMX20_02022 | | Fumarate hydratase class II | 0.69 | MPMX20_03420 | | Serine hydroxymethyltransferase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.44 | QEN71_RS04360 | | class II fumarate hydratase | 0.69 | QEN71_RS33600 | | serine hydroxymethyltransferase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.44 | BPHYT_RS14615 | | fumarate hydratase | 0.65 | BPHYT_RS03725 | | serine hydroxymethyltransferase | low | > 109 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.44 | GFF1806 | | Fumarate hydratase class II (EC 4.2.1.2) | 0.70 | GFF2447 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Erwinia tracheiphila SCR3 | 0.43 | LU632_RS12335 | fumC | class II fumarate hydratase | 0.71 | LU632_RS17915 | | serine hydroxymethyltransferase | — | — |
| Pantoea sp. MT58 | 0.43 | IAI47_10335 | | class II fumarate hydratase | 0.73 | IAI47_04960 | | serine hydroxymethyltransferase | — | — |
| Dickeya dadantii 3937 | 0.43 | DDA3937_RS10655 | | class II fumarate hydratase | 0.72 | DDA3937_RS15600 | | serine hydroxymethyltransferase | — | — |
| Dechlorosoma suillum PS | 0.43 | Dsui_0926 | | fumarate hydratase, class II | 0.66 | Dsui_1265 | | glycine/serine hydroxymethyltransferase | — | — |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS10755 | | class II fumarate hydratase | 0.71 | HER17_RS05950 | | serine hydroxymethyltransferase | — | — |
| Dickeya dianthicola 67-19 | 0.43 | HGI48_RS10655 | | class II fumarate hydratase | 0.72 | HGI48_RS15700 | | serine hydroxymethyltransferase | — | — |
| Dickeya dianthicola ME23 | 0.43 | DZA65_RS11125 | | class II fumarate hydratase | 0.72 | DZA65_RS16775 | | serine hydroxymethyltransferase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.42 | HSERO_RS07610 | | fumarate hydratase | 0.66 | HSERO_RS06140 | | serine hydroxymethyltransferase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.42 | GFF4101 | | Fumarate hydratase class II (EC 4.2.1.2) | 0.65 | GFF5152 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS10540 | | class II fumarate hydratase | 0.62 | ABIE40_RS06715 | | serine hydroxymethyltransferase | — | — |
| Azospirillum brasilense Sp245 | 0.42 | AZOBR_RS06120 | | fumarate hydratase | 0.57 | AZOBR_RS10015 | | serine hydroxymethyltransferase | — | — |
| Variovorax sp. OAS795 | 0.42 | ABID97_RS17545 | | class II fumarate hydratase | 0.66 | ABID97_RS17890 | | serine hydroxymethyltransferase | — | — |
| Variovorax sp. SCN45 | 0.42 | GFF479 | | Fumarate hydratase class II (EC 4.2.1.2) | 0.65 | GFF560 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.42 | A4249_RS05005 | | class II fumarate hydratase | 0.55 | A4249_RS06040 | | serine hydroxymethyltransferase | — | — |
| Acidovorax sp. GW101-3H11 | 0.42 | Ac3H11_943 | | Fumarate hydratase class II (EC 4.2.1.2) | 0.66 | Ac3H11_2921 | | Serine hydroxymethyltransferase (EC 2.1.2.1) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.42 | AMB_RS18480 | | class II fumarate hydratase | 0.58 | AMB_RS11815 | | serine hydroxymethyltransferase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.42 | DVU0080 | fumC | fumarate hydratase, class II (TIGR) | 0.61 | DVU1203 | glyA | serine hydroxymethyltransferase (TIGR) | — | — |
| Castellaniella sp019104865 MT123 | 0.42 | ABCV34_RS03655 | | class II fumarate hydratase | 0.69 | ABCV34_RS06400 | | serine hydroxymethyltransferase | low | > 48 |
| Rhodospirillum rubrum S1H | 0.41 | Rru_A2129 | | Fumarate hydratase, class II (NCBI) | 0.57 | Rru_A1827 | | Glycine hydroxymethyltransferase (NCBI) | low | > 58 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.41 | CA265_RS23855 | | fumarate hydratase, class II | 0.52 | CA265_RS19165 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.41 | Psyr_3661 | | Fumarate hydratase, class II | 0.75 | Psyr_4270 | | serine hydroxymethyltransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.41 | Psyr_3661 | | Fumarate hydratase, class II | 0.75 | Psyr_4270 | | serine hydroxymethyltransferase | low | > 86 |
| Synechococcus elongatus PCC 7942 | 0.41 | Synpcc7942_1007 | fumC | fumarate hydratase | 0.60 | Synpcc7942_0282 | glyA | serine hydroxymethyltransferase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_02150 | | fumarate hydratase | 0.76 | AO353_14020 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas sp. S08-1 | 0.41 | OH686_21015 | | fumarate hydratase, class II | 0.76 | OH686_16230 | | Serine hydroxymethyltransferase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.40 | RR42_RS33090 | | fumarate hydratase | 0.66 | RR42_RS15485 | | serine hydroxymethyltransferase | — | — |
| Agrobacterium fabrum C58 | 0.40 | Atu1616 | | fumarate hydratase | 0.61 | Atu1165 | | serine hydroxymethyltransferase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.40 | Dshi_2334 | | fumarate hydratase, class II (RefSeq) | 0.61 | Dshi_0821 | | Glycine hydroxymethyltransferase (RefSeq) | — | — |
| Bosea sp. OAE506 | 0.40 | ABIE41_RS12805 | | class II fumarate hydratase | 0.61 | ABIE41_RS19780 | | serine hydroxymethyltransferase | — | — |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_2682 | | fumarate hydratase, class II | 0.77 | Psest_3404 | | Glycine/serine hydroxymethyltransferase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.40 | PGA1_c13520 | | fumarate hydratase class II | 0.60 | PGA1_c11870 | | serine hydroxymethyltransferase GlyA | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.40 | CA264_17145 | | class II fumarate hydratase | 0.53 | CA264_17045 | | serine hydroxymethyltransferase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.40 | ABZR88_RS20230 | | class II fumarate hydratase | 0.52 | ABZR88_RS00640 | | serine hydroxymethyltransferase | — | — |
| Caulobacter crescentus NA1000 | 0.40 | CCNA_02194 | | fumarate hydratase | 0.57 | CCNA_01419 | | serine hydroxymethyltransferase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.40 | CCNA_02194 | | fumarate hydratase | 0.57 | CCNA_01419 | | serine hydroxymethyltransferase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.39 | Echvi_1329 | | fumarate hydratase, class II | 0.53 | Echvi_1188 | | Glycine/serine hydroxymethyltransferase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.36 | DvMF_0565 | aspA | aspartate ammonia-lyase (RefSeq) | 0.60 | DvMF_3097 | glyA | serine hydroxymethyltransferase (RefSeq) | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.35 | HMPREF1058_RS06295 | | aspartate ammonia-lyase | 0.55 | HMPREF1058_RS03800 | | serine hydroxymethyltransferase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.35 | ABI39_RS20055 | | aspartate ammonia-lyase | 0.55 | ABI39_RS17420 | | serine hydroxymethyltransferase | low | > 72 |
| Bacteroides ovatus ATCC 8483 | 0.33 | BACOVA_01069 | | aspartate ammonia-lyase | 0.55 | BACOVA_02446 | | glycine hydroxymethyltransferase | low | > 94 |
| Bacteroides stercoris CC31F | 0.32 | HMPREF1181_RS11250 | | aspartate ammonia-lyase | 0.55 | HMPREF1181_RS15010 | | serine hydroxymethyltransferase | low | > 56 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.32 | BT2755 | | aspartate ammonia-lyase (NCBI ptt file) | 0.55 | BT0738 | | serine hydroxymethyltransferase (NCBI ptt file) | low | > 81 |
Not shown: 1 genomes with orthologs for Xcc-8004.3403.1 only; 3 genomes with orthologs for Xcc-8004.4398.1 only