| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.1434.1 | | FIG000859: hypothetical protein YebC | 1.0 | Xcc-8004.2954.1 | | Threonine synthase (EC 4.2.3.1) | 0.54 | 15 |
| Lysobacter sp. OAE881 | 0.76 | ABIE51_RS05035 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.56 | ABIE51_RS17530 | | threonine synthase | low | > 62 |
| Pseudomonas fluorescens FW300-N2C3 | 0.59 | AO356_18010 | | hypothetical protein | 0.29 | AO356_06370 | | threonine synthase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_5534 | | FIG000859: hypothetical protein YebC | 0.29 | Pf6N2E2_3142 | | Threonine synthase (EC 4.2.3.1) | — | — |
| Pseudomonas sp. RS175 | 0.58 | PFR28_03415 | | Transcriptional regulatory protein PmpR | 0.28 | PFR28_00334 | | Threonine synthase | — | — |
| Dechlorosoma suillum PS | 0.58 | Dsui_0489 | | DNA-binding regulatory protein, YebC/PmpR family | 0.23 | Dsui_2904 | | threonine synthase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS17750 | | transcriptional regulator | 0.20 | HSERO_RS10470 | | threonine synthase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS04735 | | hypothetical protein | 0.20 | RR42_RS12535 | | threonine synthase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.56 | PfGW456L13_1850 | | FIG000859: hypothetical protein YebC | 0.28 | PfGW456L13_1724 | | Threonine synthase (EC 4.2.3.1) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.55 | Psyr_1407 | | Protein of unknown function DUF28 | 0.29 | Psyr_1291 | | L-threonine synthase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.55 | Psyr_1407 | | Protein of unknown function DUF28 | 0.29 | Psyr_1291 | | L-threonine synthase | — | — |
| Shewanella oneidensis MR-1 | 0.55 | SO2432 | | conserved hypothetical protein TIGR01033 (NCBI ptt file) | 0.29 | SO3413 | thrC | threonine synthase (NCBI ptt file) | low | > 76 |
| Dickeya dadantii 3937 | 0.55 | DDA3937_RS10065 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.32 | DDA3937_RS18405 | | threonine synthase | low | > 74 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_1954 | | hypothetical protein (RefSeq) | 0.29 | Shewana3_1141 | | threonine synthase (RefSeq) | low | > 73 |
| Dickeya dianthicola 67-19 | 0.55 | HGI48_RS10095 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.31 | HGI48_RS18335 | | threonine synthase | low | > 71 |
| Dickeya dianthicola ME23 | 0.55 | DZA65_RS10510 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.31 | DZA65_RS19475 | | threonine synthase | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.54 | HER17_RS11855 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.29 | HER17_RS02805 | | threonine synthase | low | > 75 |
| Shewanella amazonensis SB2B | 0.54 | Sama_1842 | | hypothetical protein (RefSeq) | 0.30 | Sama_0907 | | threonine synthase (RefSeq) | low | > 62 |
| Serratia liquefaciens MT49 | 0.54 | IAI46_14635 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.31 | IAI46_03040 | | threonine synthase | low | > 86 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS24100 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.29 | PFLU_RS24545 | | threonine synthase | 0.60 | 54 |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS24100 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.29 | PFLU_RS24545 | | threonine synthase | — | — |
| Erwinia tracheiphila SCR3 | 0.54 | LU632_RS13425 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.31 | LU632_RS02620 | thrC | threonine synthase | — | — |
| Shewanella loihica PV-4 | 0.54 | Shew_2078 | | hypothetical protein (RefSeq) | 0.30 | Shew_1081 | | threonine synthase (RefSeq) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_640 | | FIG000859: hypothetical protein YebC | 0.29 | Pf1N1B4_3014 | | Threonine synthase (EC 4.2.3.1) | — | — |
| Pseudomonas simiae WCS417 | 0.53 | PS417_22460 | | hypothetical protein | 0.29 | PS417_22880 | | threonine synthase | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_03595 | | hypothetical protein | 0.29 | AO353_04350 | | threonine synthase | — | — |
| Rahnella sp. WP5 | 0.53 | EX31_RS11685 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.31 | EX31_RS03935 | | threonine synthase | low | > 89 |
| Enterobacter sp. TBS_079 | 0.53 | MPMX20_02769 | | putative transcriptional regulatory protein YebC | 0.31 | MPMX20_00712 | | Threonine synthase | low | > 85 |
| Escherichia coli ECRC100 | 0.53 | OKFHMN_26255 | | putative transcriptional regulatory protein YebC | 0.30 | OKFHMN_11100 | thrC | threonine synthase | low | > 80 |
| Escherichia coli ECRC101 | 0.53 | MCAODC_19150 | | putative transcriptional regulatory protein YebC | 0.30 | MCAODC_01615 | thrC | threonine synthase | low | > 87 |
| Escherichia coli ECRC98 | 0.53 | JDDGAC_00830 | | putative transcriptional regulatory protein YebC | 0.30 | JDDGAC_14695 | thrC | threonine synthase | low | > 86 |
| Escherichia coli ECOR27 | 0.53 | NOLOHH_16700 | | putative transcriptional regulatory protein YebC | 0.30 | NOLOHH_03430 | thrC | threonine synthase | low | > 75 |
| Ralstonia solanacearum GMI1000 | 0.53 | RS_RS10990 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.20 | RS_RS06660 | | threonine synthase | — | — |
| Escherichia coli ECRC102 | 0.53 | NIAGMN_01805 | | putative transcriptional regulatory protein YebC | 0.30 | NIAGMN_08950 | thrC | threonine synthase | — | — |
| Escherichia coli Nissle 1917 | 0.53 | ECOLIN_RS10380 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.30 | ECOLIN_RS00020 | | threonine synthase | low | > 55 |
| Marinobacter adhaerens HP15 | 0.53 | HP15_2043 | | protein YebC | 0.25 | HP15_765 | | threonine synthase | — | — |
| Escherichia coli BL21 | 0.53 | ECD_01835 | | UPF0082 family protein | 0.30 | ECD_00004 | | L-threonine synthase | low | > 61 |
| Escherichia coli ECRC99 | 0.53 | KEDOAH_01850 | | putative transcriptional regulatory protein YebC | 0.30 | KEDOAH_17055 | thrC | threonine synthase | — | — |
| Escherichia fergusonii Becca | 0.53 | EFB2_02078 | | putative transcriptional regulatory protein YebC | 0.30 | EFB2_04039 | | Threonine synthase | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.53 | OHPLBJKB_01864 | | putative transcriptional regulatory protein YebC | 0.30 | OHPLBJKB_03656 | | Threonine synthase | low | > 73 |
| Paraburkholderia graminis OAS925 | 0.53 | ABIE53_001546 | | YebC/PmpR family DNA-binding regulatory protein | 0.20 | ABIE53_002027 | | threonine synthase | — | — |
| Escherichia coli ECOR38 | 0.53 | HEPCGN_04665 | | putative transcriptional regulatory protein YebC | 0.30 | HEPCGN_09105 | thrC | threonine synthase | low | > 87 |
| Escherichia coli ECRC62 | 0.53 | BNILDI_15490 | | putative transcriptional regulatory protein YebC | 0.30 | BNILDI_08170 | thrC | threonine synthase | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.53 | GFF1645 | | FIG000859: hypothetical protein YebC | 0.30 | GFF1080 | | Threonine synthase (EC 4.2.3.1) | low | > 78 |
| Escherichia coli BW25113 | 0.53 | b1864 | yebC | hypothetical protein (NCBI) | 0.30 | b0004 | thrC | threonine synthase (NCBI) | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS15405 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.21 | ABZR87_RS05865 | | threonine synthase | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.53 | H281DRAFT_04522 | | DNA-binding regulatory protein, YebC/PmpR family | 0.20 | H281DRAFT_00811 | | L-threonine synthase | — | — |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_0693 | | DNA-binding regulatory protein, YebC/PmpR family | 0.31 | EX28DRAFT_3616 | | threonine synthase | low | > 76 |
| Rhodanobacter sp. FW510-T8 | 0.53 | OKGIIK_01830 | tACO1 | YebC/PmpR family DNA-binding transcriptional regulator | 0.63 | OKGIIK_13570 | thrC | threonine synthase | low | > 52 |
| Pantoea sp. MT58 | 0.53 | IAI47_08435 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.30 | IAI47_16205 | | threonine synthase | low | > 76 |
| Ralstonia solanacearum IBSBF1503 | 0.53 | RALBFv3_RS03540 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.19 | RALBFv3_RS15880 | | threonine synthase | — | — |
| Ralstonia solanacearum UW163 | 0.53 | UW163_RS10130 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.19 | UW163_RS13325 | | threonine synthase | — | — |
| Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS04700 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.61 | LRK55_RS09995 | | threonine synthase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS04920 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.61 | LRK54_RS10355 | | threonine synthase | low | > 59 |
| Ralstonia solanacearum PSI07 | 0.52 | RPSI07_RS13685 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.19 | RPSI07_RS17485 | | threonine synthase | — | — |
| Pseudomonas sp. S08-1 | 0.52 | OH686_19120 | | Probable transcriptional regulatory protein YebC | 0.28 | OH686_17765 | | threonine synthase | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.52 | BPHYT_RS06410 | | transcriptional regulator | 0.19 | BPHYT_RS08960 | | threonine synthase | low | > 109 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.52 | GFF4523 | | FIG000859: hypothetical protein YebC | 0.21 | GFF3936 | | Threonine synthase (EC 4.2.3.1) | — | — |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_1494 | | DNA-binding regulatory protein, YebC/PmpR family | 0.28 | Psest_3125 | | threonine synthase | — | — |
| Klebsiella michiganensis M5al | 0.52 | BWI76_RS18160 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.31 | BWI76_RS04255 | | threonine synthase | — | — |
| Pseudomonas putida KT2440 | 0.52 | PP_1214 | | putative transcriptional regulatory protein | 0.29 | PP_1471 | | Threonine synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS24395 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.21 | QEN71_RS22400 | | threonine synthase | low | > 153 |
| Variovorax sp. OAS795 | 0.51 | ABID97_RS16740 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.21 | ABID97_RS10895 | | threonine synthase | — | — |
| Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_2422 | | FIG000859: hypothetical protein | 0.21 | Ac3H11_1505 | | Threonine synthase (EC 4.2.3.1) | — | — |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS02555 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.23 | ABCV34_RS02300 | | threonine synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.48 | ABZR86_RS10850 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.61 | ABZR86_RS15975 | | threonine synthase (EC 4.2.3.1) (from data) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.41 | TX73_005640 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.25 | TX73_004325 | | threonine synthase | — | — |
| Sinorhizobium meliloti 1021 | 0.40 | SMc03969 | | hypothetical protein | 0.26 | SMc00077 | | threonine synthase | — | — |
| Bosea sp. OAE506 | 0.39 | ABIE41_RS09460 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.27 | ABIE41_RS22985 | | threonine synthase | — | — |
| Rhizobium sp. OAE497 | 0.39 | ABIE40_RS15665 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.27 | ABIE40_RS04230 | | threonine synthase | — | — |
| Agrobacterium fabrum C58 | 0.39 | Atu3727 | | hypothetical protein | 0.26 | Atu0787 | | threonine synthase | — | — |
| Rhodospirillum rubrum S1H | 0.39 | Rru_A1086 | | hypothetical protein (RefSeq) | 0.28 | Rru_A3233 | | Threonine synthase (NCBI) | — | — |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_00695 | | putative transcriptional regulatory protein | 0.27 | MPMX19_00671 | | Threonine synthase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.39 | AMB_RS16265 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.28 | AMB_RS17140 | | threonine synthase | — | — |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS09035 | | transcriptional regulator | 0.26 | AZOBR_RS10545 | | threonine synthase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.38 | PGA1_c21770 | | DNA-binding regulatory protein, YebC/PmpR family | 0.28 | PGA1_c06310 | | threonine synthase ThrC | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.36 | A4249_RS15840 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.25 | A4249_RS00020 | | threonine synthase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.35 | Ga0059261_0824 | | DNA-binding regulatory protein, YebC/PmpR family | 0.24 | Ga0059261_1999 | | threonine synthase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_2762 | | protein of unknown function DUF28 (RefSeq) | 0.27 | Dshi_1146 | | threonine synthase (RefSeq) | — | — |
| Caulobacter crescentus NA1000 | 0.35 | CCNA_03352 | | YebC/PmpR transcriptional regulator | 0.26 | CCNA_03510 | | threonine synthase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.35 | CCNA_03352 | | YebC/PmpR transcriptional regulator | 0.26 | CCNA_03510 | | threonine synthase | — | — |
| Bifidobacterium breve UCC2003 | 0.35 | BBR_RS15645 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.23 | BBR_RS14070 | | threonine synthase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.34 | CSW01_14085 | | transcriptional regulator | 0.32 | CSW01_11965 | | threonine synthase | low | > 62 |
| Bacteroides stercoris CC31F | 0.32 | HMPREF1181_RS16620 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.35 | HMPREF1181_RS00050 | | threonine synthase | low | > 56 |
| Alteromonas macleodii MIT1002 | 0.32 | MIT1002_00845 | | putative transcriptional regulatory protein YeeN | 0.31 | MIT1002_03084 | | Threonine synthase | low | > 70 |
| Bacteroides ovatus ATCC 8483 | 0.32 | BACOVA_02249 | | DNA-binding regulatory protein, YebC/PmpR family | 0.35 | BACOVA_03023 | | threonine synthase | low | > 94 |
| Phocaeicola vulgatus CL09T03C04 | 0.32 | HMPREF1058_RS03510 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.34 | HMPREF1058_RS14730 | | threonine synthase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.32 | ABI39_RS17640 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.34 | ABI39_RS10440 | | threonine synthase | low | > 72 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.32 | BT0627 | | conserved hypothetical protein, with a conserved domain of unknown function (NCBI ptt file) | 0.35 | BT2401 | | threonine synthase (NCBI ptt file) | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.29 | ABZR88_RS22270 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.35 | ABZR88_RS18960 | | threonine synthase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.29 | HMPREF1078_RS09835 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.34 | HMPREF1078_RS10395 | | threonine synthase | low | > 61 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.28 | CA265_RS15330 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.35 | CA265_RS23465 | | threonine synthase | low | > 88 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.27 | Echvi_1239 | | DNA-binding regulatory protein, YebC/PmpR family | 0.35 | Echvi_2002 | | threonine synthase | low | > 79 |
Not shown: 9 genomes with orthologs for Xcc-8004.1434.1 only; 0 genomes with orthologs for Xcc-8004.2954.1 only