| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Xanthomonas campestris pv. campestris strain 8004 | 1.0 | Xcc-8004.4620.1 | | Alanine racemase (EC 5.1.1.1) | 1.0 | Xcc-8004.1964.1 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.68 | 5 |
| Rhodanobacter denitrificans MT42 | 0.67 | LRK55_RS00355 | | alanine racemase | 0.85 | LRK55_RS01465 | | tryptophan synthase subunit beta | — | — |
| Rhodanobacter sp. FW510-T8 | 0.67 | OKGIIK_06670 | alr | alanine racemase | 0.84 | OKGIIK_04845 | trpB | tryptophan synthase subunit beta | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.67 | LRK54_RS00585 | | alanine racemase | 0.85 | LRK54_RS01685 | | tryptophan synthase subunit beta | — | — |
| Pseudomonas sp. S08-1 | 0.65 | OH686_13695 | | alanine racemase | 0.66 | OH686_12425 | | tryptophan synthase, beta subunit | low | > 80 |
| Pseudomonas putida KT2440 | 0.64 | PP_5269 | | alanine racemase, PLP-binding | 0.64 | PP_0083 | | tryptophan synthase beta chain | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.62 | PFLU_RS29370 | | alanine racemase | 0.65 | PFLU_RS00180 | | tryptophan synthase subunit beta | — | — |
| Pseudomonas simiae WCS417 | 0.62 | PS417_27695 | | alanine racemase | 0.65 | PS417_00185 | | tryptophan synthase subunit beta | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_814 | | Alanine racemase (EC 5.1.1.1) | 0.65 | PfGW456L13_566 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Pseudomonas fluorescens SBW25 | 0.62 | PFLU_RS29370 | | alanine racemase | 0.65 | PFLU_RS00180 | | tryptophan synthase subunit beta | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_0237 | | alanine racemase | 0.64 | Psyr_0034 | | tryptophan synthase, beta chain | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_0237 | | alanine racemase | 0.64 | Psyr_0034 | | tryptophan synthase, beta chain | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_2146 | | Alanine racemase (EC 5.1.1.1) | 0.64 | Pf1N1B4_1831 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_09145 | | alanine racemase | 0.64 | AO353_10710 | | tryptophan synthase subunit beta | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.62 | AO356_12630 | | alanine racemase | 0.65 | AO356_10915 | | tryptophan synthase subunit beta | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.61 | Pf6N2E2_4393 | | Alanine racemase (EC 5.1.1.1) | 0.65 | Pf6N2E2_4048 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Pseudomonas sp. RS175 | 0.61 | PFR28_04397 | | Alanine racemase | 0.65 | PFR28_04715 | | Tryptophan synthase beta chain | — | — |
| Pseudomonas stutzeri RCH2 | 0.41 | Psest_0699 | | alanine racemase | 0.64 | Psest_0063 | | tryptophan synthase, beta subunit | — | — |
| Klebsiella michiganensis M5al | 0.40 | BWI76_RS01920 | | alanine racemase | 0.52 | BWI76_RS11845 | | tryptophan synthase subunit beta | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.40 | GFF1422 | | Alanine racemase (EC 5.1.1.1) | 0.51 | GFF2725 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 78 |
| Escherichia coli Nissle 1917 | 0.40 | ECOLIN_RS23405 | | alanine racemase | 0.52 | ECOLIN_RS07600 | | tryptophan synthase subunit beta | low | > 55 |
| Kangiella aquimarina DSM 16071 | 0.40 | B158DRAFT_2013 | | alanine racemase | 0.51 | B158DRAFT_2429 | | tryptophan synthase, beta subunit | low | > 40 |
| Escherichia coli ECOR38 | 0.40 | HEPCGN_11540 | alr | alanine racemase | 0.52 | HEPCGN_25520 | trpB | tryptophan synthase subunit beta | low | > 87 |
| Escherichia coli ECOR27 | 0.40 | NOLOHH_05175 | alr | alanine racemase | 0.52 | NOLOHH_20330 | trpB | tryptophan synthase subunit beta | low | > 75 |
| Escherichia coli ECRC62 | 0.40 | BNILDI_06350 | alr | alanine racemase | 0.52 | BNILDI_18475 | trpB | tryptophan synthase subunit beta | low | > 75 |
| Escherichia coli BW25113 | 0.40 | b4053 | alr | alanine racemase (NCBI) | 0.52 | b1261 | trpB | tryptophan synthase subunit beta (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.40 | ECD_03925 | | alanine racemase, biosynthetic, PLP-binding | 0.52 | ECD_01235 | | tryptophan synthase, beta subunit | low | > 61 |
| Escherichia fergusonii Becca | 0.40 | EFB2_04547 | | Alanine racemase, biosynthetic | 0.52 | EFB2_02665 | | Tryptophan synthase beta chain | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.40 | OHPLBJKB_03990 | | Alanine racemase, biosynthetic | 0.52 | OHPLBJKB_02422 | | Tryptophan synthase beta chain | low | > 73 |
| Escherichia coli ECRC101 | 0.40 | MCAODC_03435 | alr | alanine racemase | 0.52 | MCAODC_15595 | trpB | tryptophan synthase subunit beta | low | > 87 |
| Escherichia coli ECRC100 | 0.40 | OKFHMN_12925 | alr | alanine racemase | 0.52 | OKFHMN_02670 | trpB | tryptophan synthase subunit beta | low | > 80 |
| Escherichia coli ECRC98 | 0.40 | JDDGAC_16560 | alr | alanine racemase | 0.52 | JDDGAC_05215 | trpB | tryptophan synthase subunit beta | low | > 86 |
| Escherichia coli ECRC102 | 0.40 | NIAGMN_10770 | alr | alanine racemase | 0.52 | NIAGMN_26840 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli ECRC99 | 0.40 | KEDOAH_15225 | alr | alanine racemase | 0.52 | KEDOAH_26080 | trpB | tryptophan synthase subunit beta | — | — |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_02698 | | Alanine racemase, catabolic | 0.52 | MPMX20_02513 | | Tryptophan synthase beta chain | low | > 85 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS17510 | | alanine racemase | 0.51 | DDA3937_RS10465 | | tryptophan synthase subunit beta | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_01955 | | alanine racemase | 0.50 | CSW01_05930 | | tryptophan synthase subunit beta | — | — |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS10740 | | alanine racemase | 0.65 | HSERO_RS16475 | | tryptophan synthase subunit alpha | — | — |
| Erwinia tracheiphila SCR3 | 0.39 | LU632_RS13065 | dadX | catabolic alanine racemase DadX | 0.52 | LU632_RS12770 | trpB | tryptophan synthase subunit beta | — | — |
| Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_4259 | | alanine racemase | 0.53 | EX28DRAFT_0933 | | tryptophan synthase, beta subunit | low | > 76 |
| Pantoea sp. MT58 | 0.39 | IAI47_08895 | | catabolic alanine racemase DadX | 0.51 | IAI47_09170 | | tryptophan synthase subunit beta | — | — |
| Dickeya dianthicola 67-19 | 0.39 | HGI48_RS17565 | | alanine racemase | 0.51 | HGI48_RS10465 | | tryptophan synthase subunit beta | low | > 71 |
| Ralstonia solanacearum GMI1000 | 0.39 | RS_RS06875 | | alanine racemase | 0.69 | RS_RS09965 | | tryptophan synthase subunit beta | — | — |
| Pectobacterium carotovorum WPP14 | 0.39 | HER17_RS03655 | | alanine racemase | 0.51 | HER17_RS10935 | | tryptophan synthase subunit beta | low | > 75 |
| Rahnella sp. WP5 | 0.39 | EX31_RS11885 | | alanine racemase | 0.50 | EX31_RS09975 | | tryptophan synthase subunit beta | low | > 89 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS18650 | | alanine racemase | 0.51 | DZA65_RS10945 | | tryptophan synthase subunit beta | low | > 75 |
| Serratia liquefaciens MT49 | 0.38 | IAI46_22945 | | alanine racemase | 0.52 | IAI46_14040 | | tryptophan synthase subunit beta | low | > 86 |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS11665 | | alanine racemase | 0.68 | ABZR87_RS14500 | | tryptophan synthase subunit beta | — | — |
| Shewanella amazonensis SB2B | 0.38 | Sama_3057 | alr | alanine racemase (RefSeq) | 0.52 | Sama_2133 | | tryptophan synthase subunit beta (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.38 | SO3916 | alr | alanine racemase, biosynthetic (NCBI ptt file) | 0.51 | SO3023 | trpB | tryptophan synthase, beta subunit (NCBI ptt file) | — | — |
| Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS17275 | | alanine racemase | 0.69 | RPSI07_RS14730 | | tryptophan synthase subunit beta | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_0714 | alr | alanine racemase (RefSeq) | 0.51 | Shewana3_1516 | | tryptophan synthase subunit beta (RefSeq) | — | — |
| Ralstonia solanacearum UW163 | 0.37 | UW163_RS13535 | | alanine racemase | 0.69 | UW163_RS11140 | | tryptophan synthase subunit beta | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.37 | RALBFv3_RS00205 | | alanine racemase | 0.69 | RALBFv3_RS02585 | | tryptophan synthase subunit beta | — | — |
| Dechlorosoma suillum PS | 0.37 | Dsui_2411 | | alanine racemase | 0.69 | Dsui_3192 | | tryptophan synthase, beta subunit | — | — |
| Shewanella loihica PV-4 | 0.37 | Shew_3277 | alr | alanine racemase (RefSeq) | 0.53 | Shew_2255 | | tryptophan synthase subunit beta (RefSeq) | — | — |
| Paraburkholderia graminis OAS925 | 0.37 | ABIE53_002527 | | alanine racemase | 0.69 | ABIE53_004809 | | tryptophan synthase beta chain | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_00589 | | alanine racemase | 0.69 | H281DRAFT_06067 | | tryptophan synthase, beta chain | — | — |
| Alteromonas macleodii MIT1002 | 0.37 | MIT1002_00544 | | Alanine racemase | 0.51 | MIT1002_01426 | | Tryptophan synthase beta chain | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.37 | GFF1915 | | Alanine racemase (EC 5.1.1.1) | 0.67 | GFF3355 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Variovorax sp. SCN45 | 0.36 | GFF5109 | | Alanine racemase (EC 5.1.1.1) | 0.66 | GFF3883 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.36 | QEN71_RS06315 | | alanine racemase | 0.70 | QEN71_RS17645 | | tryptophan synthase subunit beta | — | — |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS12240 | | alanine racemase | 0.71 | BPHYT_RS33875 | | tryptophan synthase subunit alpha | — | — |
| Variovorax sp. OAS795 | 0.35 | ABID97_RS03685 | | alanine racemase | 0.66 | ABID97_RS08430 | | tryptophan synthase subunit beta | — | — |
| Acidovorax sp. GW101-3H11 | 0.35 | Ac3H11_3382 | | Alanine racemase, catabolic (EC 5.1.1.1) | 0.64 | Ac3H11_1534 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS12035 | | alanine racemase | 0.69 | RR42_RS14360 | | tryptophan synthase subunit alpha | — | — |
| Castellaniella sp019104865 MT123 | 0.33 | ABCV34_RS06375 | | alanine racemase | 0.66 | ABCV34_RS08435 | | tryptophan synthase subunit beta | — | — |
| Marinobacter adhaerens HP15 | 0.33 | HP15_630 | | alanine racemase | 0.66 | HP15_1827 | | tryptophan synthase, beta subunit | — | — |
| Acinetobacter radioresistens SK82 | 0.31 | MPMX26_01153 | | Alanine racemase | 0.67 | MPMX26_02617 | | Tryptophan synthase beta chain | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.31 | ABZR86_RS08850 | | alanine racemase | 0.84 | ABZR86_RS08000 | | tryptophan synthase subunit beta | — | — |
| Synechococcus elongatus PCC 7942 | 0.25 | Synpcc7942_2201 | alr | alanine racemase | 0.58 | Synpcc7942_2143 | trpB | tryptophan synthase subunit beta | — | — |
| Lysobacter sp. OAE881 | 0.25 | ABIE51_RS09255 | | alanine racemase | 0.86 | ABIE51_RS08260 | | tryptophan synthase subunit beta | — | — |
| Methanococcus maripaludis JJ | 0.25 | MMJJ_RS06585 | | alanine racemase | 0.57 | MMJJ_RS09190 | | tryptophan synthase subunit beta | low | > 28 |
| Methanococcus maripaludis S2 | 0.25 | MMP_RS07770 | | alanine racemase | 0.57 | MMP_RS05190 | | tryptophan synthase subunit beta | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.23 | A4249_RS03755 | | alanine racemase | 0.63 | A4249_RS11330 | | tryptophan synthase subunit beta | — | — |
| Caulobacter crescentus NA1000 | 0.23 | CCNA_01733 | | alanine racemase | 0.63 | CCNA_03658 | | tryptophan synthase beta chain | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.23 | CCNA_01733 | | alanine racemase | 0.63 | CCNA_03658 | | tryptophan synthase beta chain | low | > 67 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.23 | DVU0955 | alr | alanine racemase (TIGR) | 0.55 | DVU0085 | trpB-1 | tryptophan synthase, beta subunit (TIGR) | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.22 | DvMF_1349 | | alanine racemase (RefSeq) | 0.55 | DvMF_2237 | | tryptophan synthase subunit beta (RefSeq) | low | > 51 |
| Azospirillum sp. SherDot2 | 0.22 | MPMX19_06140 | | Alanine racemase, biosynthetic | 0.65 | MPMX19_02736 | | Tryptophan synthase beta chain | — | — |
| Rhodopseudomonas palustris CGA009 | 0.21 | TX73_015960 | | alanine racemase | 0.64 | TX73_000360 | | tryptophan synthase subunit beta | — | — |
| Bosea sp. OAE506 | 0.21 | ABIE41_RS17795 | | alanine racemase | 0.64 | ABIE41_RS04270 | | tryptophan synthase subunit beta | — | — |
| Agrobacterium fabrum C58 | 0.21 | Atu3292 | | alanine racemase | 0.65 | Atu0018 | | tryptophan synthase beta subunit | — | — |
| Azospirillum brasilense Sp245 | 0.20 | AZOBR_RS08350 | | alanine racemase | 0.64 | AZOBR_RS00525 | | tryptophan synthase subunit beta | — | — |
| Rhodospirillum rubrum S1H | 0.20 | Rru_A0409 | | Alanine racemase region (NCBI) | 0.63 | Rru_A3427 | | Tryptophan synthase, beta chain (NCBI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.19 | PGA1_c10880 | | alanine racemase, biosynthetic | 0.62 | PGA1_c04870 | | tryptophan synthase beta chain | — | — |
| Magnetospirillum magneticum AMB-1 | 0.19 | AMB_RS10575 | | alanine racemase | 0.63 | AMB_RS20295 | | tryptophan synthase subunit beta | — | — |
| Dinoroseobacter shibae DFL-12 | 0.19 | Dshi_2378 | | alanine racemase (RefSeq) | 0.63 | Dshi_1031 | | tryptophan synthase, beta subunit (RefSeq) | — | — |
| Sinorhizobium meliloti 1021 | 0.18 | SMc00557 | | alanine racemase | 0.64 | SMc02766 | | tryptophan synthase subunit beta | low | > 103 |
| Rhizobium sp. OAE497 | 0.18 | ABIE40_RS06295 | | alanine racemase | 0.64 | ABIE40_RS19335 | | tryptophan synthase subunit beta | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.17 | Ga0059261_0986 | | alanine racemase | 0.64 | Ga0059261_0238 | | tryptophan synthase, beta subunit | — | — |
Not shown: 2 genomes with orthologs for Xcc-8004.4620.1 only; 11 genomes with orthologs for Xcc-8004.1964.1 only