| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens GW456-L13 | 1.0 | PfGW456L13_5000 | | Histidinol dehydrogenase (EC 1.1.1.23) | 1.0 | PfGW456L13_3947 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.91 | 16 |
| Pseudomonas fluorescens FW300-N1B4 | 0.95 | Pf1N1B4_1066 | | Histidinol dehydrogenase (EC 1.1.1.23) | 0.98 | Pf1N1B4_14 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.95 | Pf6N2E2_3252 | | Histidinol dehydrogenase (EC 1.1.1.23) | 0.98 | Pf6N2E2_64 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.76 | 23 |
| Pseudomonas fluorescens FW300-N2E3 | 0.95 | AO353_05110 | | histidinol dehydrogenase | 0.99 | AO353_20625 | | 3-isopropylmalate dehydratase | 0.90 | 13 |
| Pseudomonas fluorescens FW300-N2C3 | 0.95 | AO356_06965 | | histidinol dehydrogenase | 0.98 | AO356_21405 | | 3-isopropylmalate dehydratase | 0.85 | 30 |
| Pseudomonas sp. RS175 | 0.94 | PFR28_00187 | | Histidinol dehydrogenase | 0.99 | PFR28_02823 | | 3-isopropylmalate dehydratase small subunit 1 | 0.64 | 22 |
| Pseudomonas fluorescens SBW25-INTG | 0.94 | PFLU_RS04470 | | histidinol dehydrogenase | 0.95 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.81 | 16 |
| Pseudomonas fluorescens SBW25 | 0.94 | PFLU_RS04470 | | histidinol dehydrogenase | 0.95 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.47 | 56 |
| Pseudomonas simiae WCS417 | 0.94 | PS417_04420 | | histidinol dehydrogenase | 0.94 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.86 | 22 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_4133 | | histidinol dehydrogenase | 0.92 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.87 | 20 |
| Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_4133 | | histidinol dehydrogenase | 0.92 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.84 | 20 |
| Pseudomonas putida KT2440 | 0.90 | PP_0966 | | Histidinol dehydrogenase | 0.94 | PP_1986 | | 3-isopropylmalate dehydratase small subunit | 0.84 | 28 |
| Pseudomonas stutzeri RCH2 | 0.87 | Psest_3298 | | histidinol dehydrogenase | 0.85 | Psest_2590 | | 3-isopropylmalate dehydratase, small subunit | 0.87 | 18 |
| Pseudomonas sp. S08-1 | 0.86 | OH686_08470 | | Histidinol dehydrogenase | 0.89 | OH686_04475 | | 3-isopropylmalate dehydratase small subunit | 0.75 | 34 |
| Marinobacter adhaerens HP15 | 0.69 | HP15_2428 | | histidinol dehydrogenase | 0.72 | HP15_1833 | | isopropylmalate isomerase small subunit | 0.85 | 15 |
| Cupriavidus basilensis FW507-4G11 | 0.65 | RR42_RS18915 | | histidinol dehydrogenase | 0.69 | RR42_RS14390 | | 3-isopropylmalate dehydratase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.63 | HSERO_RS20345 | | histidinol dehydrogenase | 0.72 | HSERO_RS16505 | | 3-isopropylmalate dehydratase small subunit | 0.88 | 10 |
| Dechlorosoma suillum PS | 0.63 | Dsui_1411 | | histidinol dehydrogenase | 0.72 | Dsui_3199 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Variovorax sp. SCN45 | 0.62 | GFF5345 | | Histidinol dehydrogenase (EC 1.1.1.23) | 0.71 | GFF3889 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | — | — |
| Variovorax sp. OAS795 | 0.62 | ABID97_RS23160 | | histidinol dehydrogenase | 0.70 | ABID97_RS08460 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Acidovorax sp. GW101-3H11 | 0.62 | Ac3H11_4724 | | Histidinol dehydrogenase (EC 1.1.1.23) | 0.68 | Ac3H11_1527 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.61 | GFF1314 | | Histidinol dehydrogenase (EC 1.1.1.23) | 0.71 | GFF3361 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.61 | RALBFv3_RS06845 | | histidinol dehydrogenase | 0.74 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Ralstonia solanacearum PSI07 | 0.61 | RPSI07_RS10390 | | histidinol dehydrogenase | 0.74 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.61 | QEN71_RS27865 | | histidinol dehydrogenase | 0.70 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.73 | 59 |
| Ralstonia solanacearum UW163 | 0.61 | UW163_RS06770 | | histidinol dehydrogenase | 0.74 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Ralstonia sp. UNC404CL21Col | 0.61 | ABZR87_RS02500 | | histidinol dehydrogenase | 0.74 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Paraburkholderia graminis OAS925 | 0.61 | ABIE53_003701 | | histidinol dehydrogenase | 0.70 | ABIE53_004803 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit | — | — |
| Ralstonia solanacearum GMI1000 | 0.61 | RS_RS14790 | | histidinol dehydrogenase | 0.74 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Burkholderia phytofirmans PsJN | 0.61 | BPHYT_RS17710 | | histidinol dehydrogenase | 0.71 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.60 | H281DRAFT_05652 | | histidinol dehydrogenase | 0.71 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Acinetobacter radioresistens SK82 | 0.57 | MPMX26_02587 | | Histidinol dehydrogenase | 0.73 | MPMX26_00346 | | 3-isopropylmalate dehydratase small subunit 1 | 0.91 | 18 |
| Castellaniella sp019104865 MT123 | 0.56 | ABCV34_RS11230 | | histidinol dehydrogenase | 0.71 | ABCV34_RS04285 | | 3-isopropylmalate dehydratase small subunit | low | > 48 |
| Sinorhizobium meliloti 1021 | 0.46 | SMc02307 | | histidinol dehydrogenase | 0.53 | SMc03795 | | isopropylmalate isomerase small subunit | 0.82 | 49 |
| Magnetospirillum magneticum AMB-1 | 0.46 | AMB_RS16905 | | histidinol dehydrogenase | 0.56 | AMB_RS20565 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Rhodospirillum rubrum S1H | 0.46 | Rru_A2771 | | Histidinol dehydrogenase (NCBI) | 0.55 | Rru_A1190 | | 3-isopropylmalate dehydratase small subunit region (NCBI) | low | > 58 |
| Phaeobacter inhibens DSM 17395 | 0.45 | PGA1_c31190 | | histidinol dehydrogenase HisD | 0.55 | PGA1_c29790 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Bosea sp. OAE506 | 0.45 | ABIE41_RS24015 | | histidinol dehydrogenase | 0.51 | ABIE41_RS11640 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.44 | Dshi_0979 | | Histidinol dehydrogenase (RefSeq) | 0.55 | Dshi_0083 | | 3-isopropylmalate dehydratase, small subunit (RefSeq) | — | — |
| Rhizobium sp. OAE497 | 0.44 | ABIE40_RS02725 | | histidinol dehydrogenase | 0.52 | ABIE40_RS19040 | | 3-isopropylmalate dehydratase small subunit | 0.94 | 21 |
| Azospirillum sp. SherDot2 | 0.44 | MPMX19_05543 | | Histidinol dehydrogenase | 0.56 | MPMX19_00606 | | 3-isopropylmalate dehydratase small subunit 1 | — | — |
| Agrobacterium fabrum C58 | 0.44 | Atu0537 | | histidinol dehydrogenase | 0.52 | Atu2790 | | 3-isopropylmalate dehydratase, small subunit | 0.90 | 17 |
| Sphingomonas koreensis DSMZ 15582 | 0.44 | Ga0059261_1281 | | histidinol dehydrogenase | 0.38 | Ga0059261_4225 | | 3-isopropylmalate dehydratase, small subunit | 0.95 | 33 |
| Rhodopseudomonas palustris CGA009 | 0.43 | TX73_023540 | | histidinol dehydrogenase | 0.53 | TX73_001215 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Caulobacter crescentus NA1000 | 0.38 | CCNA_02431 | | histidinol dehydrogenase | 0.46 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.96 | 17 |
| Caulobacter crescentus NA1000 Δfur | 0.38 | CCNA_02431 | | histidinol dehydrogenase | 0.46 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | low | > 67 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.34 | Xcc-8004.2948.1 | | Histidinol dehydrogenase (EC 1.1.1.23) | 0.82 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.84 | 17 |
| Vibrio cholerae E7946 ATCC 55056 | 0.33 | CSW01_05750 | | histidinol dehydrogenase | 0.56 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | low | > 62 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.32 | OHPLBJKB_01680 | | Histidinol dehydrogenase | 0.60 | OHPLBJKB_03586 | | 3-isopropylmalate dehydratase small subunit | low | > 73 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.32 | CA265_RS03635 | | histidinol dehydrogenase | 0.42 | CA265_RS15840 | | 3-isopropylmalate dehydratase small subunit | 0.90 | 30 |
| Escherichia coli ECRC101 | 0.32 | MCAODC_20425 | hisD | Histidinol dehydrogenase | 0.61 | MCAODC_01245 | leuD | 3-isopropylmalate dehydratase small subunit | 0.96 | 9 |
| Escherichia coli ECRC98 | 0.32 | JDDGAC_28625 | hisD | Histidinol dehydrogenase | 0.61 | JDDGAC_14325 | leuD | 3-isopropylmalate dehydratase small subunit | 0.93 | 30 |
| Escherichia coli ECRC99 | 0.32 | KEDOAH_03635 | hisD | Histidinol dehydrogenase | 0.61 | KEDOAH_17425 | leuD | 3-isopropylmalate dehydratase small subunit | — | — |
| Escherichia coli BL21 | 0.32 | ECD_01922 | | bifunctional histidinal dehydrogenase/ histidinol dehydrogenase | 0.60 | ECD_00073 | | 3-isopropylmalate dehydratase small subunit | 0.88 | 21 |
| Escherichia coli ECRC102 | 0.32 | NIAGMN_22460 | hisD | Histidinol dehydrogenase | 0.61 | NIAGMN_08580 | leuD | 3-isopropylmalate dehydratase small subunit | — | — |
| Escherichia coli ECRC100 | 0.32 | OKFHMN_24515 | hisD | Histidinol dehydrogenase | 0.61 | OKFHMN_10730 | leuD | 3-isopropylmalate dehydratase small subunit | 0.82 | 66 |
| Escherichia coli Nissle 1917 | 0.32 | ECOLIN_RS11945 | | histidinol dehydrogenase | 0.60 | ECOLIN_RS00385 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Shewanella amazonensis SB2B | 0.32 | Sama_1942 | hisD | histidinol dehydrogenase (RefSeq) | 0.49 | Sama_0338 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.93 | 32 |
| Dickeya dadantii 3937 | 0.32 | DDA3937_RS09735 | | histidinol dehydrogenase | 0.57 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | low | > 74 |
| Escherichia coli BW25113 | 0.32 | b2020 | hisD | histidinol dehydrogenase (NCBI) | 0.60 | b0071 | leuD | isopropylmalate isomerase small subunit (NCBI) | 0.95 | 13 |
| Escherichia coli ECOR38 | 0.32 | HEPCGN_03220 | hisD | Histidinol dehydrogenase | 0.60 | HEPCGN_08710 | leuD | 3-isopropylmalate dehydratase small subunit | 0.86 | 65 |
| Escherichia coli ECOR27 | 0.32 | NOLOHH_15830 | hisD | Histidinol dehydrogenase | 0.60 | NOLOHH_03075 | leuD | 3-isopropylmalate dehydratase small subunit | 0.84 | 64 |
| Escherichia fergusonii Becca | 0.32 | EFB2_01836 | | Histidinol dehydrogenase | 0.60 | EFB2_03974 | | 3-isopropylmalate dehydratase small subunit | low | > 86 |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS10055 | | histidinol dehydrogenase | 0.57 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | 0.69 | 45 |
| Klebsiella michiganensis M5al | 0.32 | BWI76_RS18925 | | histidinol dehydrogenase | 0.59 | BWI76_RS04665 | | 3-isopropylmalate dehydratase small subunit | 0.90 | 11 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.32 | GFF3912 | | Histidinol dehydrogenase (EC 1.1.1.23) | 0.61 | GFF167 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | low | > 78 |
| Dickeya dianthicola 67-19 | 0.32 | HGI48_RS09745 | | histidinol dehydrogenase | 0.57 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | low | > 71 |
| Shewanella loihica PV-4 | 0.32 | Shew_2198 | | histidinol dehydrogenase (RefSeq) | 0.56 | Shew_3469 | | isopropylmalate isomerase small subunit (RefSeq) | 0.89 | 39 |
| Lysobacter sp. OAE881 | 0.32 | ABIE51_RS13325 | | histidinol dehydrogenase | 0.40 | ABIE51_RS17580 | | 3-isopropylmalate dehydratase small subunit | 0.89 | 56 |
| Erwinia tracheiphila SCR3 | 0.31 | LU632_RS08945 | hisD | histidinol dehydrogenase | 0.52 | LU632_RS02865 | leuD | 3-isopropylmalate dehydratase small subunit | 0.74 | 45 |
| Rahnella sp. WP5 | 0.31 | EX31_RS11440 | | histidinol dehydrogenase | 0.60 | EX31_RS03695 | | 3-isopropylmalate dehydratase small subunit | 0.95 | 36 |
| Shewanella sp. ANA-3 | 0.31 | Shewana3_1853 | hisD | histidinol dehydrogenase (RefSeq) | 0.51 | Shewana3_3758 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.94 | 18 |
| Escherichia coli ECRC62 | 0.31 | BNILDI_14740 | hisD | Histidinol dehydrogenase | 0.60 | BNILDI_08535 | leuD | 3-isopropylmalate dehydratase small subunit | 0.95 | 43 |
| Rhodanobacter denitrificans FW104-10B01 | 0.31 | LRK54_RS01605 | | histidinol dehydrogenase | 0.46 | LRK54_RS07370 | | 3-isopropylmalate dehydratase small subunit | low | > 59 |
| Alteromonas macleodii MIT1002 | 0.31 | MIT1002_02633 | | Histidinol dehydrogenase | 0.49 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | 0.94 | 44 |
| Bifidobacterium breve UCC2003 | 0.31 | BBR_RS17055 | | histidinol dehydrogenase | 0.37 | BBR_RS19625 | | 3-isopropylmalate dehydratase small subunit | low | > 34 |
| Pectobacterium carotovorum WPP14 | 0.31 | HER17_RS12230 | | histidinol dehydrogenase | 0.56 | HER17_RS03070 | | 3-isopropylmalate dehydratase small subunit | 0.95 | 32 |
| Enterobacter sp. TBS_079 | 0.31 | MPMX20_03002 | | Histidinol dehydrogenase | 0.60 | MPMX20_00766 | | 3-isopropylmalate dehydratase small subunit 1 | 0.92 | 25 |
| Rhodanobacter sp. FW510-T8 | 0.31 | OKGIIK_04950 | hisD | histidinol dehydrogenase | 0.36 | OKGIIK_13590 | leuD | 3-isopropylmalate dehydratase small subunit | low | > 52 |
| Rhodanobacter denitrificans MT42 | 0.31 | LRK55_RS01385 | | histidinol dehydrogenase | 0.46 | LRK55_RS07100 | | 3-isopropylmalate dehydratase small subunit | low | > 63 |
| Enterobacter asburiae PDN3 | 0.31 | EX28DRAFT_0539 | | histidinol dehydrogenase | 0.59 | EX28DRAFT_3667 | | 3-isopropylmalate dehydratase, small subunit | 0.82 | 35 |
| Shewanella oneidensis MR-1 | 0.31 | SO2073 | hisD | histidinol dehydrogenase (NCBI ptt file) | 0.51 | SO4233 | leuD | 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) | 0.97 | 16 |
| Serratia liquefaciens MT49 | 0.31 | IAI46_08210 | | histidinol dehydrogenase | 0.57 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | low | > 86 |
| Pantoea sp. MT58 | 0.30 | IAI47_07090 | | histidinol dehydrogenase | 0.56 | IAI47_16015 | | 3-isopropylmalate dehydratase small subunit | 0.96 | 23 |
| Dyella japonica UNC79MFTsu3.2 | 0.30 | ABZR86_RS06730 | | histidinol dehydrogenase | 0.40 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.92 | 61 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.30 | ABZR88_RS06880 | | histidinol dehydrogenase | 0.38 | ABZR88_RS11600 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Mycobacterium tuberculosis H37Rv | 0.29 | Rv1599 | | Probable histidinol dehydrogenase HisD (HDH) | 0.35 | Rv2987c | | Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | — | — |
| Phocaeicola dorei CL03T12C01 | 0.29 | ABI39_RS11835 | | histidinol dehydrogenase | 0.40 | ABI39_RS10205 | | 3-isopropylmalate dehydratase small subunit | 0.73 | 42 |
| Phocaeicola vulgatus CL09T03C04 | 0.29 | HMPREF1058_RS15875 | | histidinol dehydrogenase | 0.40 | HMPREF1058_RS14555 | | 3-isopropylmalate dehydratase small subunit | 0.80 | 41 |
| Erwinia amylovora T8 | 0.29 | OLJFJH_12180 | | histidinol dehydrogenase | 0.52 | OLJFJH_01300 | | 3-isopropylmalate dehydratase small subunit | 0.85 | 47 |
| Parabacteroides merdae CL09T00C40 | 0.29 | HMPREF1078_RS02450 | | histidinol dehydrogenase | 0.38 | HMPREF1078_RS16655 | | 3-isopropylmalate dehydratase small subunit | low | > 61 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.28 | Echvi_2459 | | histidinol dehydrogenase | 0.38 | Echvi_2060 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Bacteroides stercoris CC31F | 0.28 | HMPREF1181_RS04860 | | histidinol dehydrogenase | 0.41 | HMPREF1181_RS14140 | | 3-isopropylmalate dehydratase small subunit | 0.88 | 36 |
| Bacteroides ovatus ATCC 8483 | 0.28 | BACOVA_01234 | | histidinol dehydrogenase | 0.39 | BACOVA_04602 | | 3-isopropylmalate dehydratase, small subunit | 0.94 | 31 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.28 | CA264_05030 | | histidinol dehydrogenase | 0.40 | CA264_09440 | | 3-isopropylmalate dehydratase small subunit | low | > 74 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.28 | BT0201 | | histidinol dehydrogenase (NCBI ptt file) | 0.38 | BT1859 | | 3-isopropylmalate dehydratase small subunit (NCBI ptt file) | 0.83 | 38 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.28 | A4249_RS10695 | | histidinol dehydrogenase | 0.35 | A4249_RS10000 | | 3-isopropylmalate dehydratase small subunit | 0.99 | 38 |
| Kangiella aquimarina DSM 16071 | 0.27 | B158DRAFT_2293 | | histidinol dehydrogenase | 0.74 | B158DRAFT_1320 | | 3-isopropylmalate dehydratase, small subunit | low | > 40 |
Not shown: 5 genomes with orthologs for PfGW456L13_5000 only; 1 genomes with orthologs for PfGW456L13_3947 only