Conservation of cofitness between HER17_RS02805 and HER17_RS03080 in Pectobacterium carotovorum WPP14

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS03080 3-isopropylmalate dehydrogenase 0.95 3
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.93 DDA3937_RS18120 3-isopropylmalate dehydrogenase low > 74
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.93 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.72 7
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.93 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.74 4
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.89 EX31_RS03685 3-isopropylmalate dehydrogenase 0.99 5
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.90 IAI46_03350 3-isopropylmalate dehydrogenase 0.62 62
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.83 IAI47_16005 3-isopropylmalate dehydrogenase 0.94 9
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.83 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.88 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.48 48
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.88 MPMX20_00768 3-isopropylmalate dehydrogenase 0.91 26
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.89 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.92 18
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.88 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.92 23
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.88 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.88 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.87 26
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.88 EFB2_03972 3-isopropylmalate dehydrogenase low > 86
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.88 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.99 9
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.88 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.95 17
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.88 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.96 3
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.88 BNILDI_08545 leuA 2-isopropylmalate synthase 0.91 22
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.88 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.88 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.84 35
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.88 OHPLBJKB_03584 3-isopropylmalate dehydrogenase low > 73
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.88 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.89 30
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.88 ECOLIN_RS00395 3-isopropylmalate dehydrogenase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.88 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.78 CSW01_12600 3-isopropylmalate dehydrogenase low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.64 MIT1002_00948 3-isopropylmalate dehydrogenase 0.88 48
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.69 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.98 12
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.70 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.92 27
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.69 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.97 10
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.68 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.94 20
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2401 threonine synthase (NCBI ptt file) 0.41 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.89 28
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03023 threonine synthase 0.41 BACOVA_04600 3-isopropylmalate dehydrogenase 0.95 14
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10440 threonine synthase 0.41 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.85 10
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14730 threonine synthase 0.41 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.74 47
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00050 threonine synthase 0.40 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.90 33
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2002 threonine synthase 0.43 Echvi_2062 3-isopropylmalate dehydrogenase — —
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS10395 threonine synthase 0.41 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.95 42
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS18960 threonine synthase 0.43 ABZR88_RS11605 3-isopropylmalate dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS23465 threonine synthase 0.43 CA265_RS15850 3-isopropylmalate dehydrogenase 0.88 7
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.47 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.80 26
Phaeobacter inhibens DSM 17395 0.29 PGA1_c06310 threonine synthase ThrC 0.46 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB — —
Lysobacter sp. OAE881 0.29 ABIE51_RS17530 threonine synthase 0.42 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.96 14
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.50 AO356_21415 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.50 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.50 AO353_20635 3-isopropylmalate dehydrogenase — —
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.50 PP_1988 3-isopropylmalate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.49 Psyr_1985 3-isopropylmalate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.49 Psyr_1985 3-isopropylmalate dehydrogenase — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.39 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.39 LRK54_RS10325 3-isopropylmalate dehydrogenase low > 59
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.49 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.48 OH686_04470 3-isopropylmalate dehydrogenase low > 80
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.51 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.51 PS417_18585 3-isopropylmalate dehydrogenase — —
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.50 PFR28_02821 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.51 PFLU_RS20565 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.51 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.39 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.37 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.94 46
Caulobacter crescentus NA1000 0.27 CCNA_03510 threonine synthase 0.40 CCNA_00193 3-isopropylmalate dehydrogenase — —
Sinorhizobium meliloti 1021 0.27 SMc00077 threonine synthase 0.43 SMc04405 3-isopropylmalate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.50 Psest_2589 3-isopropylmalate dehydrogenase — —
Bosea sp. OAE506 0.27 ABIE41_RS22985 threonine synthase 0.42 ABIE41_RS11860 3-isopropylmalate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03510 threonine synthase 0.40 CCNA_00193 3-isopropylmalate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.44 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) — —
Agrobacterium fabrum C58 0.26 Atu0787 threonine synthase 0.44 Atu2791 3-isopropylmalate dehydrogenase — —
Rhodospirillum rubrum S1H 0.26 Rru_A3233 Threonine synthase (NCBI) 0.43 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) — —
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.45 MPMX19_00607 3-isopropylmalate dehydrogenase — —
Rhizobium sp. OAE497 0.26 ABIE40_RS04230 threonine synthase 0.43 ABIE40_RS19050 3-isopropylmalate dehydrogenase — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.45 AZOBR_RS14130 3-isopropylmalate dehydrogenase — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.50 HP15_1832 3-isopropylmalate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.43 TX73_001175 3-isopropylmalate dehydrogenase — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.48 ABCV34_RS04280 3-isopropylmalate dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00020 threonine synthase 0.42 A4249_RS09995 3-isopropylmalate dehydrogenase 0.99 10
Magnetospirillum magneticum AMB-1 0.24 AMB_RS17140 threonine synthase 0.43 AMB_RS20570 3-isopropylmalate dehydrogenase — —
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.50 Dsui_3198 3-isopropylmalate dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.45 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.96 30
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.49 ABID97_RS08455 3-isopropylmalate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.47 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.47 ABZR87_RS14530 3-isopropylmalate dehydrogenase low > 80
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.47 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.67 61
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.48 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.46 HSERO_RS16500 3-isopropylmalate dehydrogenase — —
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.49 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.47 RR42_RS14385 3-isopropylmalate dehydrogenase — —
Bifidobacterium breve UCC2003 0.21 BBR_RS14070 threonine synthase 0.29 BBR_RS12870 3-isopropylmalate dehydrogenase low > 34
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.47 ABIE53_004804 3-isopropylmalate dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.48 H281DRAFT_06072 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.47 RS_RS09990 3-isopropylmalate dehydrogenase — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.48 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.62 62
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.47 UW163_RS11115 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.47 RALBFv3_RS02610 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.47 RPSI07_RS14705 3-isopropylmalate dehydrogenase — —

Not shown: 0 genomes with orthologs for HER17_RS02805 only; 9 genomes with orthologs for HER17_RS03080 only