Conservation of cofitness between HER17_RS02805 and HER17_RS03075 in Pectobacterium carotovorum WPP14

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.95 5
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.89 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.67 72
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.89 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.81 1
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.89 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.71 8
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.91 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.99 3
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.89 IAI46_03345 3-isopropylmalate dehydratase large subunit 0.76 34
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.87 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.94 8
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.78 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.87 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.51 32
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.86 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.91 20
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.84 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.93 12
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.85 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 0.91 27
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.85 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 0.99 1
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.85 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1 0.86 36
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.85 ECD_00074 3-isopropylmalate dehydratase large subunit 0.95 10
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.85 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1 0.98 32
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.85 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1 0.92 12
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.85 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.85 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1 0.83 37
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.85 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.85 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.85 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.89 32
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.85 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.85 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.86 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.78 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.68 MIT1002_00947 3-isopropylmalate dehydratase large subunit 0.92 34
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.70 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.98 11
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.70 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.93 19
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.70 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.97 11
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.69 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.94 15
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2401 threonine synthase (NCBI ptt file) 0.51 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) 0.90 27
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03023 threonine synthase 0.52 BACOVA_04603 3-isopropylmalate dehydratase, large subunit 0.95 10
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14730 threonine synthase 0.50 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit 0.80 40
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10440 threonine synthase 0.51 ABI39_RS10200 3-isopropylmalate dehydratase large subunit 0.88 4
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00050 threonine synthase 0.51 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit 0.92 28
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2002 threonine synthase 0.52 Echvi_2059 3-isopropylmalate dehydratase, large subunit 0.73 48
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS10395 threonine synthase 0.51 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit 0.96 34
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS18960 threonine synthase 0.57 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS23465 threonine synthase 0.57 CA265_RS15830 3-isopropylmalate dehydratase large subunit 0.88 5
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.62 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.79 29
Lysobacter sp. OAE881 0.29 ABIE51_RS17530 threonine synthase 0.49 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.92 47
Phaeobacter inhibens DSM 17395 0.29 PGA1_c06310 threonine synthase ThrC 0.60 PGA1_c29780 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.63 AO353_20620 isopropylmalate isomerase
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.62 AO356_21400 isopropylmalate isomerase
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.62 PP_1985 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.62 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.62 Psyr_1983 3-isopropylmalate dehydratase, large subunit
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.62 Psyr_1983 3-isopropylmalate dehydratase, large subunit
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.54 LRK55_RS07105 3-isopropylmalate dehydratase large subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.54 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.62 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.62 OH686_04480 3-isopropylmalate dehydratase large subunit low > 80
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.62 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.62 PS417_18600 isopropylmalate isomerase
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.62 PFR28_02824 3-isopropylmalate dehydratase large subunit
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.62 PFLU_RS20580 3-isopropylmalate dehydratase large subunit
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.51 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.96 21
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.50 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit low > 52
Bosea sp. OAE506 0.27 ABIE41_RS22985 threonine synthase 0.62 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03510 threonine synthase 0.60 CCNA_00196 3-isopropylmalate dehydratase large subunit
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.62 Psest_2591 3-isopropylmalate dehydratase, large subunit
Caulobacter crescentus NA1000 0.27 CCNA_03510 threonine synthase 0.60 CCNA_00196 3-isopropylmalate dehydratase large subunit
Sinorhizobium meliloti 1021 0.27 SMc00077 threonine synthase 0.64 SMc03823 isopropylmalate isomerase large subunit
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.59 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq)
Agrobacterium fabrum C58 0.26 Atu0787 threonine synthase 0.63 Atu2709 3-isopropylmalate dehydratase, large subunit
Rhodospirillum rubrum S1H 0.26 Rru_A3233 Threonine synthase (NCBI) 0.66 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI)
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.65 MPMX19_01998 3-isopropylmalate dehydratase large subunit
Rhizobium sp. OAE497 0.26 ABIE40_RS04230 threonine synthase 0.63 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.65 AZOBR_RS03545 isopropylmalate isomerase
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.61 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.62 TX73_001245 3-isopropylmalate dehydratase large subunit
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.62 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00020 threonine synthase 0.50 A4249_RS10005 3-isopropylmalate dehydratase large subunit 0.99 9
Magnetospirillum magneticum AMB-1 0.24 AMB_RS17140 threonine synthase 0.63 AMB_RS20560 3-isopropylmalate dehydratase large subunit
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.58 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.58 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.98 5
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.59 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.60 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.61 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit low > 80
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.61 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.74 48
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.59 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.61 HSERO_RS16515 isopropylmalate isomerase
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.60 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.60 RR42_RS14400 isopropylmalate isomerase
Bifidobacterium breve UCC2003 0.21 BBR_RS14070 threonine synthase 0.54 BBR_RS19630 3-isopropylmalate dehydratase large subunit low > 34
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.61 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.61 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.60 RS_RS10000 3-isopropylmalate dehydratase large subunit
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.61 BPHYT_RS33915 isopropylmalate isomerase 0.63 58
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.60 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.60 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.61 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit

Not shown: 0 genomes with orthologs for HER17_RS02805 only; 9 genomes with orthologs for HER17_RS03075 only