Conservation of cofitness between HER17_RS02805 and HER17_RS02900 in Pectobacterium carotovorum WPP14

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS02900 carbamoyl-phosphate synthase large subunit 0.96 2
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.96 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit 0.89 5
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.96 DZA65_RS19380 carbamoyl-phosphate synthase large subunit 0.68 19
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.96 HGI48_RS18240 carbamoyl-phosphate synthase large subunit 0.68 17
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.95 EX31_RS03830 carbamoyl-phosphate synthase large subunit 0.98 19
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.96 IAI46_03195 carbamoyl-phosphate synthase large subunit 0.89 5
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.94 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.86 46
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.92 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.96 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.95 MPMX20_00740 Carbamoyl-phosphate synthase large chain 0.88 43
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.95 BWI76_RS04470 carbamoyl phosphate synthase large subunit 0.60 79
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.95 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit 0.94 3
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.95 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit 0.87 52
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.95 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.95 ECD_00037 carbamoyl-phosphate synthase large subunit low > 61
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.95 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.95 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit 0.71 71
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.95 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.95 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.95 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.95 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit low > 80
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.95 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) 0.83 56
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.95 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain low > 73
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.95 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.95 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.87 CSW01_12100 carbamoyl-phosphate synthase large chain low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.80 MIT1002_01467 Carbamoyl-phosphate synthase large chain 0.97 8
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.84 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.87 55
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.84 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.92 30
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.84 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.90 56
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.85 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) low > 62
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2401 threonine synthase (NCBI ptt file) 0.36 BT0557 carbamyl phosphate synthetase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03023 threonine synthase 0.35 BACOVA_03752 carbamoyl-phosphate synthase, large subunit low > 94
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14730 threonine synthase 0.36 HMPREF1058_RS06870 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 67
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10440 threonine synthase 0.36 ABI39_RS20665 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 72
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00050 threonine synthase 0.35 HMPREF1181_RS16075 carbamoyl-phosphate synthase large subunit low > 56
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2002 threonine synthase 0.43 Echvi_0768 carbamoyl-phosphate synthase, large subunit
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS10395 threonine synthase 0.35 HMPREF1078_RS01300 carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS18960 threonine synthase 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS23465 threonine synthase 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.70 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Phaeobacter inhibens DSM 17395 0.29 PGA1_c06310 threonine synthase ThrC 0.57 PGA1_c24560 carbamoyl-phosphate synthase large chain
Lysobacter sp. OAE881 0.29 ABIE51_RS17530 threonine synthase 0.69 ABIE51_RS11615 carbamoyl-phosphate synthase large subunit low > 62
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.75 AO356_07480 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.75 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.75 PP_4723 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.75 AO353_05630 carbamoyl phosphate synthase large subunit
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.70 LRK55_RS17855 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.75 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.75 Psyr_4191 carbamoyl-phosphate synthase large subunit
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.70 LRK54_RS18000 carbamoyl-phosphate synthase large subunit
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.75 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.75 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.75 PS417_24040 carbamoyl phosphate synthase large subunit
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.75 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.75 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.76 PFR28_00077 Carbamoyl-phosphate synthase large chain
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.70 OKGIIK_07295 carB carbamoyl-phosphate synthase large subunit 0.61 46
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.69 ABZR86_RS05600 carbamoyl-phosphate synthase large subunit
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.75 Psest_0968 carbamoyl-phosphate synthase, large subunit
Sinorhizobium meliloti 1021 0.27 SMc00077 threonine synthase 0.58 SMc01215 carbamoyl phosphate synthase large subunit
Caulobacter crescentus NA1000 0.27 CCNA_03510 threonine synthase 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain
Bosea sp. OAE506 0.27 ABIE41_RS22985 threonine synthase 0.58 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03510 threonine synthase 0.59 CCNA_02994 carbamoyl-phosphate synthase large chain
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.59 Dshi_2639 carbamoyl-phosphate synthase, large subunit (RefSeq)
Rhodospirillum rubrum S1H 0.26 Rru_A3233 Threonine synthase (NCBI) 0.60 Rru_A2886 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI)
Agrobacterium fabrum C58 0.26 Atu0787 threonine synthase 0.58 Atu2178 carbamoylphosphate synthase large subunit
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.58 MPMX19_02299 Carbamoyl-phosphate synthase large chain
Rhizobium sp. OAE497 0.26 ABIE40_RS04230 threonine synthase 0.58 ABIE40_RS12815 carbamoyl-phosphate synthase large subunit
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.59 AZOBR_RS12895 carbamoyl phosphate synthase large subunit
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.74 HP15_3077 carbamoyl-phosphate synthase, large subunit
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.60 TX73_021090 carbamoyl-phosphate synthase large subunit
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.66 ABCV34_RS15510 carbamoyl-phosphate synthase large subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00020 threonine synthase 0.58 A4249_RS00725 carbamoyl-phosphate synthase large subunit
Magnetospirillum magneticum AMB-1 0.24 AMB_RS17140 threonine synthase 0.60 AMB_RS03605 carbamoyl-phosphate synthase large subunit
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.61 Ga0059261_0007 carbamoyl-phosphate synthase, large subunit
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.68 Dsui_3064 carbamoyl-phosphate synthase, large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.66 GFF4898 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.67 ABID97_RS17080 carbamoyl-phosphate synthase large subunit
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.66 QEN71_RS04780 carbamoyl-phosphate synthase large subunit
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.67 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.67 HSERO_RS06925 carbamoyl phosphate synthase large subunit
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.68 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.67 ABIE53_003004 carbamoyl-phosphate synthase large subunit
Bifidobacterium breve UCC2003 0.21 BBR_RS14070 threonine synthase 0.49 BBR_RS13635 carbamoyl-phosphate synthase large subunit low > 34
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.67 RR42_RS13510 carbamoyl phosphate synthase large subunit
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.66 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.67 RS_RS07630 carbamoyl-phosphate synthase large chain
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.67 BPHYT_RS14190 carbamoyl phosphate synthase large subunit 0.84 1
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.67 UW163_RS15500 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.67 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.67 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit

Not shown: 0 genomes with orthologs for HER17_RS02805 only; 10 genomes with orthologs for HER17_RS02900 only