Conservation of cofitness between HER17_RS02805 and HER17_RS02895 in Pectobacterium carotovorum WPP14

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.93 16
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.90 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.87 6
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.90 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.63 43
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.90 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.67 21
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.91 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.97 28
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.89 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.86 11
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.86 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.85 48
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.86 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.89 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.86 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.85 53
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.89 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.53 89
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.88 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.87 49
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.88 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.88 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.85 39
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.88 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.88 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase low > 61
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.88 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.74 64
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.88 EFB2_04013 Carbamoyl-phosphate synthase small chain low > 86
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.88 BNILDI_08325 carA carbamoyl phosphate synthase small subunit low > 75
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.88 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.83 78
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.88 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit low > 75
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.88 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.84 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.88 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain low > 73
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.88 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.88 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.81 CSW01_12105 carbamoyl-phosphate synthase small subunit low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.73 MIT1002_01466 Carbamoyl-phosphate synthase small chain 0.97 12
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.76 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.89 50
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.73 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) 0.91 36
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.75 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) 0.89 59
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.78 Sama_2504 carbamoyl phosphate synthase small subunit (RefSeq) low > 62
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2401 threonine synthase (NCBI ptt file) 0.33 BT0556 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03023 threonine synthase 0.34 BACOVA_03753 carbamoyl-phosphate synthase, small subunit low > 94
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14730 threonine synthase 0.33 HMPREF1058_RS06875 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 67
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10440 threonine synthase 0.33 ABI39_RS20670 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 72
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00050 threonine synthase 0.32 HMPREF1181_RS16070 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 56
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS10395 threonine synthase 0.33 HMPREF1078_RS01295 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 61
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2002 threonine synthase 0.39 Echvi_0226 carbamoyl-phosphate synthase, small subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS18960 threonine synthase 0.39 ABZR88_RS17830 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS23465 threonine synthase 0.40 CA265_RS15240 carbamoyl phosphate synthase small subunit
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.64 Xcc-8004.2914.1 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Lysobacter sp. OAE881 0.29 ABIE51_RS17530 threonine synthase 0.65 ABIE51_RS11625 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit low > 62
Phaeobacter inhibens DSM 17395 0.29 PGA1_c06310 threonine synthase ThrC 0.47 PGA1_c06670 carbamoyl-phosphate synthase small chain
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.70 AO356_07485 carbamoyl phosphate synthase small subunit
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.71 AO353_05635 carbamoyl phosphate synthase small subunit
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.70 PP_4724 Carbamoyl-phosphate synthase small chain
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.70 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.69 Psyr_4192 carbamoyl-phosphate synthase small subunit
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.64 LRK55_RS17850 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.69 Psyr_4192 carbamoyl-phosphate synthase small subunit
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.64 LRK54_RS17995 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.70 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.71 OH686_17075 Carbamoyl-phosphate synthase small chain
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.71 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.69 PS417_24045 carbamoyl phosphate synthase small subunit
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.69 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.69 PFR28_00076 Carbamoyl-phosphate synthase small chain
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.69 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.63 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.73 9
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.63 ABZR86_RS05605 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.70 Psest_0967 carbamoyl-phosphate synthase, small subunit
Caulobacter crescentus NA1000 0.27 CCNA_03510 threonine synthase 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain
Bosea sp. OAE506 0.27 ABIE41_RS22985 threonine synthase 0.46 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Sinorhizobium meliloti 1021 0.27 SMc00077 threonine synthase 0.48 SMc01569 carbamoyl phosphate synthase small subunit
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03510 threonine synthase 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.48 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq)
Agrobacterium fabrum C58 0.26 Atu0787 threonine synthase 0.46 Atu2170 carbamoylphosphate synthase small chain
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.51 MPMX19_00757 Carbamoyl-phosphate synthase small chain
Rhodospirillum rubrum S1H 0.26 Rru_A3233 Threonine synthase (NCBI) 0.49 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI)
Rhizobium sp. OAE497 0.26 ABIE40_RS04230 threonine synthase 0.46 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.51 AZOBR_RS10920 carbamoyl phosphate synthase small subunit
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.69 HP15_3078 carbamoyl-phosphate synthase small chain
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.50 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.59 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00020 threonine synthase 0.48 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Magnetospirillum magneticum AMB-1 0.24 AMB_RS17140 threonine synthase 0.52 AMB_RS03600 carbamoyl-phosphate synthase small subunit
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.67 Dsui_3065 carbamoyl-phosphate synthase, small subunit
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.46 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.63 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.63 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.64 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.64 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.63 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.64 HSERO_RS06920 carbamoyl phosphate synthase small subunit
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.63 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.63 ABIE53_003005 carbamoyl-phosphate synthase small subunit
Bifidobacterium breve UCC2003 0.21 BBR_RS14070 threonine synthase 0.39 BBR_RS13630 carbamoyl-phosphate synthase small subunit low > 34
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.65 RR42_RS13520 carbamoyl phosphate synthase small subunit
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.62 H281DRAFT_04402 carbamoyl-phosphate synthase small subunit
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.63 RS_RS07620 carbamoyl-phosphate synthase small subunit
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.62 BPHYT_RS14195 carbamoyl phosphate synthase small subunit 0.74 16
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.64 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.64 UW163_RS15510 carbamoyl-phosphate synthase small subunit
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.64 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit

Not shown: 0 genomes with orthologs for HER17_RS02805 only; 10 genomes with orthologs for HER17_RS02895 only