Conservation of cofitness between HER17_RS02805 and HER17_RS01075 in Pectobacterium carotovorum WPP14

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS02805 threonine synthase 1.0 HER17_RS01075 dihydroxy-acid dehydratase 0.94 15
Dickeya dadantii 3937 0.88 DDA3937_RS18405 threonine synthase 0.91 DDA3937_RS20155 dihydroxy-acid dehydratase 0.91 2
Dickeya dianthicola 67-19 0.87 HGI48_RS18335 threonine synthase 0.91 HGI48_RS20295 dihydroxy-acid dehydratase 0.75 3
Dickeya dianthicola ME23 0.87 DZA65_RS19475 threonine synthase 0.91 DZA65_RS21335 dihydroxy-acid dehydratase 0.66 28
Rahnella sp. WP5 0.86 EX31_RS03935 threonine synthase 0.85 EX31_RS15005 dihydroxy-acid dehydratase 0.99 1
Serratia liquefaciens MT49 0.86 IAI46_03040 threonine synthase 0.89 IAI46_24345 dihydroxy-acid dehydratase 0.78 27
Pantoea sp. MT58 0.83 IAI47_16205 threonine synthase 0.88 IAI47_01035 dihydroxy-acid dehydratase 0.96 4
Erwinia tracheiphila SCR3 0.82 LU632_RS02620 thrC threonine synthase 0.88 LU632_RS24400 ilvD dihydroxy-acid dehydratase — —
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3616 threonine synthase 0.91 EX28DRAFT_4443 dihydroxy-acid dehydratase 0.59 12
Enterobacter sp. TBS_079 0.82 MPMX20_00712 Threonine synthase 0.91 MPMX20_04499 Dihydroxy-acid dehydratase 0.95 3
Klebsiella michiganensis M5al 0.81 BWI76_RS04255 threonine synthase 0.91 BWI76_RS00975 dihydroxy-acid dehydratase 0.95 3
Escherichia coli ECRC101 0.79 MCAODC_01615 thrC threonine synthase 0.91 MCAODC_05145 ilvD dihydroxy-acid dehydratase 0.90 6
Escherichia coli ECRC99 0.79 KEDOAH_17055 thrC threonine synthase 0.91 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Escherichia coli BL21 0.79 ECD_00004 L-threonine synthase 0.91 ECD_03649 dihydroxyacid dehydratase 0.96 5
Escherichia coli ECRC100 0.79 OKFHMN_11100 thrC threonine synthase 0.91 OKFHMN_14640 ilvD dihydroxy-acid dehydratase 0.98 31
Escherichia coli ECRC98 0.79 JDDGAC_14695 thrC threonine synthase 0.91 JDDGAC_18260 ilvD dihydroxy-acid dehydratase 0.88 21
Escherichia coli ECOR38 0.79 HEPCGN_09105 thrC threonine synthase 0.91 HEPCGN_13350 ilvD dihydroxy-acid dehydratase 0.89 39
Escherichia coli ECOR27 0.79 NOLOHH_03430 thrC threonine synthase 0.92 NOLOHH_06775 ilvD dihydroxy-acid dehydratase 0.92 36
Escherichia coli ECRC102 0.79 NIAGMN_08950 thrC threonine synthase 0.91 NIAGMN_12395 ilvD dihydroxy-acid dehydratase — —
Escherichia fergusonii Becca 0.79 EFB2_04039 Threonine synthase 0.91 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Escherichia coli ECRC62 0.79 BNILDI_08170 thrC threonine synthase 0.92 BNILDI_04750 ilvD dihydroxy-acid dehydratase 0.96 2
Escherichia coli BW25113 0.79 b0004 thrC threonine synthase (NCBI) 0.91 b3771 ilvD dihydroxy-acid dehydratase (NCBI) 0.92 13
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_03656 Threonine synthase 0.91 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 73
Escherichia coli Nissle 1917 0.79 ECOLIN_RS00020 threonine synthase 0.91 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF1080 Threonine synthase (EC 4.2.3.1) 0.91 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_11965 threonine synthase 0.85 CSW01_00140 dihydroxy-acid dehydratase low > 62
Alteromonas macleodii MIT1002 0.62 MIT1002_03084 Threonine synthase 0.77 MIT1002_04041 Dihydroxy-acid dehydratase 0.94 29
Shewanella loihica PV-4 0.58 Shew_1081 threonine synthase (RefSeq) 0.80 Shew_0292 dihydroxy-acid dehydratase (RefSeq) 0.98 14
Shewanella sp. ANA-3 0.55 Shewana3_1141 threonine synthase (RefSeq) 0.81 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) 0.96 3
Shewanella oneidensis MR-1 0.55 SO3413 thrC threonine synthase (NCBI ptt file) 0.80 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) 0.97 4
Shewanella amazonensis SB2B 0.55 Sama_0907 threonine synthase (RefSeq) 0.79 Sama_3279 dihydroxy-acid dehydratase (RefSeq) 0.97 2
Bacteroides thetaiotaomicron VPI-5482 0.42 BT2401 threonine synthase (NCBI ptt file) 0.61 BT2078 dihydroxy-acid dehydratase (NCBI ptt file) 0.94 6
Bacteroides ovatus ATCC 8483 0.41 BACOVA_03023 threonine synthase 0.60 BACOVA_03302 dihydroxy-acid dehydratase 0.95 9
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10440 threonine synthase 0.63 ABI39_RS12715 dihydroxy-acid dehydratase 0.86 5
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14730 threonine synthase 0.62 HMPREF1058_RS16815 dihydroxy-acid dehydratase 0.89 21
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00050 threonine synthase 0.62 HMPREF1181_RS08335 dihydroxy-acid dehydratase 0.87 43
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2002 threonine synthase 0.28 Echvi_2055 dihydroxy-acid dehydratase 0.97 3
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS10395 threonine synthase 0.63 HMPREF1078_RS16695 dihydroxy-acid dehydratase low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.37 ABZR88_RS18960 threonine synthase 0.28 ABZR88_RS11575 dihydroxy-acid dehydratase — —
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS23465 threonine synthase 0.26 CA265_RS15795 dihydroxy-acid dehydratase 0.89 1
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2954.1 Threonine synthase (EC 4.2.3.1) 0.72 Xcc-8004.451.1 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.90 14
Phaeobacter inhibens DSM 17395 0.29 PGA1_c06310 threonine synthase ThrC 0.70 PGA1_c29490 dihydroxy-acid dehydratase LivD — —
Lysobacter sp. OAE881 0.29 ABIE51_RS17530 threonine synthase 0.27 ABIE51_RS17540 dihydroxy-acid dehydratase 0.97 10
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04350 threonine synthase 0.73 AO353_08345 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_06370 threonine synthase 0.73 AO356_13250 dihydroxy-acid dehydratase — —
Pseudomonas putida KT2440 0.28 PP_1471 Threonine synthase 0.73 PP_5128 Dihydroxy-acid dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3142 Threonine synthase (EC 4.2.3.1) 0.73 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_1291 L-threonine synthase 0.74 Psyr_0469 dihydroxyacid dehydratase — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS09995 threonine synthase 0.25 LRK55_RS09960 dihydroxy-acid dehydratase low > 63
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_1291 L-threonine synthase 0.74 Psyr_0469 dihydroxyacid dehydratase — —
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS10355 threonine synthase 0.25 LRK54_RS10320 dihydroxy-acid dehydratase low > 59
Pseudomonas sp. S08-1 0.28 OH686_17765 threonine synthase 0.73 OH686_14100 dihydroxy-acid dehydratase low > 80
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3014 Threonine synthase (EC 4.2.3.1) 0.73 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1724 Threonine synthase (EC 4.2.3.1) 0.73 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Pseudomonas simiae WCS417 0.28 PS417_22880 threonine synthase 0.73 PS417_26890 dihydroxy-acid dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS24545 threonine synthase 0.74 PFLU_RS28535 dihydroxy-acid dehydratase — —
Pseudomonas sp. RS175 0.27 PFR28_00334 Threonine synthase 0.74 PFR28_04278 Dihydroxy-acid dehydratase — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS24545 threonine synthase 0.74 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS15975 threonine synthase (EC 4.2.3.1) (from data) 0.28 ABZR86_RS15945 dihydroxy-acid dehydratase 0.95 30
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_13570 thrC threonine synthase 0.27 OKGIIK_13600 ilvD dihydroxy-acid dehydratase low > 52
Caulobacter crescentus NA1000 0.27 CCNA_03510 threonine synthase 0.71 CCNA_03139 dihydroxy-acid dehydratase — —
Pseudomonas stutzeri RCH2 0.27 Psest_3125 threonine synthase 0.73 Psest_0234 dihydroxy-acid dehydratase — —
Bosea sp. OAE506 0.27 ABIE41_RS22985 threonine synthase 0.29 ABIE41_RS15690 dihydroxy-acid dehydratase — —
Sinorhizobium meliloti 1021 0.27 SMc00077 threonine synthase 0.73 SMc04045 dihydroxy-acid dehydratase — —
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03510 threonine synthase 0.71 CCNA_03139 dihydroxy-acid dehydratase — —
Dinoroseobacter shibae DFL-12 0.26 Dshi_1146 threonine synthase (RefSeq) 0.30 Dshi_0129 dihydroxy-acid dehydratase (RefSeq) — —
Rhodospirillum rubrum S1H 0.26 Rru_A3233 Threonine synthase (NCBI) 0.70 Rru_A1786 Dihydroxy-acid dehydratase (NCBI) — —
Azospirillum sp. SherDot2 0.26 MPMX19_00671 Threonine synthase 0.75 MPMX19_05356 Dihydroxy-acid dehydratase — —
Agrobacterium fabrum C58 0.26 Atu0787 threonine synthase 0.72 Atu1918 dihydroxy-acid dehydratase — —
Rhizobium sp. OAE497 0.26 ABIE40_RS04230 threonine synthase 0.74 ABIE40_RS08005 dihydroxy-acid dehydratase — —
Azospirillum brasilense Sp245 0.26 AZOBR_RS10545 threonine synthase 0.74 AZOBR_RS15015 dihydroxy-acid dehydratase — —
Marinobacter adhaerens HP15 0.25 HP15_765 threonine synthase 0.71 HP15_595 dihydroxy-acid dehydratase — —
Rhodopseudomonas palustris CGA009 0.25 TX73_004325 threonine synthase 0.74 TX73_007515 dihydroxy-acid dehydratase — —
Castellaniella sp019104865 MT123 0.24 ABCV34_RS02300 threonine synthase 0.73 ABCV34_RS14810 dihydroxy-acid dehydratase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.24 A4249_RS00020 threonine synthase 0.25 A4249_RS10030 dihydroxy-acid dehydratase 0.99 3
Magnetospirillum magneticum AMB-1 0.24 AMB_RS17140 threonine synthase 0.73 AMB_RS12770 dihydroxy-acid dehydratase — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1999 threonine synthase 0.28 Ga0059261_4216 Dihydroxyacid dehydratase/phosphogluconate dehydratase 0.98 4
Dechlorosoma suillum PS 0.23 Dsui_2904 threonine synthase 0.73 Dsui_1122 dihydroxy-acid dehydratase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF3936 Threonine synthase (EC 4.2.3.1) 0.64 GFF2098 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Variovorax sp. OAS795 0.22 ABID97_RS25760 threonine synthase 0.31 ABID97_RS17500 dihydroxy-acid dehydratase — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS05865 threonine synthase 0.73 ABZR87_RS00240 dihydroxy-acid dehydratase low > 80
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS22400 threonine synthase 0.73 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Variovorax sp. SCN45 0.21 GFF2800 Threonine synthase (EC 4.2.3.1) 0.30 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10470 threonine synthase 0.72 HSERO_RS02650 dihydroxy-acid dehydratase — —
Acidovorax sp. GW101-3H11 0.21 Ac3H11_1505 Threonine synthase (EC 4.2.3.1) 0.73 Ac3H11_955 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Bifidobacterium breve UCC2003 0.21 BBR_RS14070 threonine synthase 0.56 BBR_RS17635 dihydroxy-acid dehydratase low > 34
Paraburkholderia graminis OAS925 0.21 ABIE53_002027 threonine synthase 0.74 ABIE53_006513 dihydroxy-acid dehydratase — —
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS12535 threonine synthase 0.29 RR42_RS16210 dihydroxy-acid dehydratase — —
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00811 L-threonine synthase 0.73 H281DRAFT_05312 dihydroxyacid dehydratase — —
Ralstonia solanacearum GMI1000 0.20 RS_RS06660 threonine synthase 0.28 RS_RS12105 dihydroxy-acid dehydratase — —
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS08960 threonine synthase 0.74 BPHYT_RS10100 dihydroxy-acid dehydratase low > 109
Ralstonia solanacearum UW163 0.20 UW163_RS13325 threonine synthase 0.28 UW163_RS09135 dihydroxy-acid dehydratase — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS15880 threonine synthase 0.28 RALBFv3_RS04535 dihydroxy-acid dehydratase — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS17485 threonine synthase 0.29 RPSI07_RS12840 dihydroxy-acid dehydratase — —

Not shown: 0 genomes with orthologs for HER17_RS02805 only; 8 genomes with orthologs for HER17_RS01075 only