Conservation of cofitness between PS417_03925 and PS417_20125 in Pseudomonas simiae WCS417

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_03925 nicotinate-nucleotide pyrophosphorylase 1.0 PS417_20125 phosphoribosylglycinamide formyltransferase 0.55 5
Pseudomonas fluorescens SBW25 0.99 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.99 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.99 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.31 98
Pseudomonas fluorescens FW300-N1B4 0.94 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.92 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_05520 nicotinate-nucleotide pyrophosphorylase 0.88 AO353_02685 phosphoribosylglycinamide formyltransferase low > 101
Pseudomonas sp. RS175 0.92 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.86 PFR28_03218 Phosphoribosylglycinamide formyltransferase low > 88
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.92 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.81 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.61 35
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.81 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.87 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.49 8
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_07370 nicotinate-nucleotide pyrophosphorylase 0.87 AO356_19085 phosphoribosylglycinamide formyltransferase 0.36 78
Pseudomonas putida KT2440 0.86 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer 0.79 PP_1664 phosphoribosylglycinamide formyltransferase 1 low > 96
Pseudomonas stutzeri RCH2 0.83 Psest_0718 nicotinate-nucleotide pyrophosphorylase 0.70 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.43 26
Pseudomonas sp. S08-1 0.78 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) 0.80 OH686_18990 phosphoribosylglycinamide formyltransferase low > 80
Marinobacter adhaerens HP15 0.71 HP15_1305 nicotinate-nucleotide pyrophosphorylase 0.55 HP15_1298 phosphoribosylglycinamide formyltransferase — —
Shewanella amazonensis SB2B 0.56 Sama_0371 nicotinate-nucleotide diphosphorylase (carboxylating) (RefSeq) 0.56 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) — —
Dechlorosoma suillum PS 0.56 Dsui_2901 nicotinate-nucleotide pyrophosphorylase 0.51 Dsui_1545 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS09850 carboxylating nicotinate-nucleotide diphosphorylase 0.42 ABZR86_RS19860 phosphoribosylglycinamide formyltransferase low > 74
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase 0.59 CSW01_11355 phosphoribosylglycinamide formyltransferase low > 62
Shewanella loihica PV-4 0.54 Shew_3435 nicotinate-nucleotide pyrophosphorylase (RefSeq) 0.55 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) — —
Acinetobacter radioresistens SK82 0.54 MPMX26_00042 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.48 MPMX26_02207 Phosphoribosylglycinamide formyltransferase low > 36
Shewanella sp. ANA-3 0.53 Shewana3_0422 nicotinate-nucleotide pyrophosphorylase [carboxylating] (RefSeq) 0.56 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) — —
Dickeya dadantii 3937 0.53 DDA3937_RS17955 carboxylating nicotinate-nucleotide diphosphorylase 0.54 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase low > 74
Rhodanobacter denitrificans MT42 0.53 LRK55_RS13510 carboxylating nicotinate-nucleotide diphosphorylase 0.43 LRK55_RS12640 phosphoribosylglycinamide formyltransferase low > 63
Alteromonas macleodii MIT1002 0.53 MIT1002_03008 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.57 MIT1002_02220 Phosphoribosylglycinamide formyltransferase — —
Pectobacterium carotovorum WPP14 0.52 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase 0.53 HER17_RS15470 phosphoribosylglycinamide formyltransferase low > 75
Dickeya dianthicola ME23 0.52 DZA65_RS19035 carboxylating nicotinate-nucleotide diphosphorylase 0.55 DZA65_RS06415 phosphoribosylglycinamide formyltransferase low > 75
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS13795 carboxylating nicotinate-nucleotide diphosphorylase 0.43 LRK54_RS12940 phosphoribosylglycinamide formyltransferase low > 59
Rahnella sp. WP5 0.52 EX31_RS03515 carboxylating nicotinate-nucleotide diphosphorylase 0.56 EX31_RS22690 phosphoribosylglycinamide formyltransferase low > 89
Dickeya dianthicola 67-19 0.52 HGI48_RS17890 carboxylating nicotinate-nucleotide diphosphorylase 0.55 HGI48_RS06065 phosphoribosylglycinamide formyltransferase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF130 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.57 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1217 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.46 GFF767 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 90
Castellaniella sp019104865 MT123 0.51 ABCV34_RS03695 carboxylating nicotinate-nucleotide diphosphorylase 0.49 ABCV34_RS05225 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum PSI07 0.51 RPSI07_RS12655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.50 RPSI07_RS12625 phosphoribosylglycinamide formyltransferase low > 81
Ralstonia solanacearum UW163 0.50 UW163_RS08940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.50 UW163_RS08910 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS04730 nicotinate-nucleotide diphosphorylase (carboxylating) 0.50 RALBFv3_RS04760 phosphoribosylglycinamide formyltransferase — —
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS00350 carboxylating nicotinate-nucleotide diphosphorylase 0.50 ABZR87_RS00380 phosphoribosylglycinamide formyltransferase — —
Acidovorax sp. GW101-3H11 0.50 Ac3H11_3838 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.46 Ac3H11_1709 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS11070 nicotinate-nucleotide pyrophosphorylase 0.50 HSERO_RS05910 phosphoribosylglycinamide formyltransferase low > 78
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS17015 nicotinate-nucleotide pyrophosphorylase 0.44 RR42_RS17050 phosphoribosylglycinamide formyltransferase low > 128
Serratia liquefaciens MT49 0.49 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase 0.56 IAI46_18890 phosphoribosylglycinamide formyltransferase low > 86
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS03065 carboxylating nicotinate-nucleotide diphosphorylase 0.49 QEN71_RS03040 phosphoribosylglycinamide formyltransferase low > 153
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2135 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.54 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Pantoea sp. MT58 0.48 IAI47_15845 carboxylating nicotinate-nucleotide diphosphorylase 0.55 IAI47_05175 phosphoribosylglycinamide formyltransferase low > 76
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS15645 nicotinate-nucleotide pyrophosphorylase 0.51 BPHYT_RS15670 phosphoribosylglycinamide formyltransferase 0.38 53
Variovorax sp. OAS795 0.48 ABID97_RS07410 carboxylating nicotinate-nucleotide diphosphorylase 0.45 ABID97_RS07775 phosphoribosylglycinamide formyltransferase 0.52 36
Enterobacter sp. TBS_079 0.48 MPMX20_00800 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.56 MPMX20_03355 Phosphoribosylglycinamide formyltransferase 0.30 83
Paraburkholderia graminis OAS925 0.48 ABIE53_003293 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.49 ABIE53_003298 phosphoribosylglycinamide formyltransferase-1 0.37 11
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3702 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.57 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_03552 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.58 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase low > 73
Escherichia coli ECOR27 0.48 NOLOHH_02875 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.58 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase low > 57
Escherichia coli BW25113 0.48 b0109 nadC nicotinate-nucleotide pyrophosphorylase (NCBI) 0.58 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) 0.57 74
Escherichia coli BL21 0.48 ECD_00108 quinolinate phosphoribosyltransferase 0.58 ECD_02392 phosphoribosylglycinamide formyltransferase 1 low > 60
Escherichia coli ECRC98 0.48 JDDGAC_14125 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.57 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC102 0.48 NIAGMN_08380 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.57 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC101 0.48 MCAODC_01045 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.57 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECOR38 0.48 HEPCGN_08510 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.58 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase low > 85
Escherichia coli ECRC101 0.48 OKFHMN_10530 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.57 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC99 0.48 KEDOAH_17625 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.58 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli Nissle 1917 0.48 ECOLIN_RS00585 carboxylating nicotinate-nucleotide diphosphorylase 0.58 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase low > 52
Escherichia fergusonii Becca 0.48 EFB2_03940 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.58 EFB2_01398 Phosphoribosylglycinamide formyltransferase low > 86
Escherichia coli ECRC62 0.48 BNILDI_08735 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.58 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum GMI1000 0.47 RS_RS12290 nicotinate-nucleotide diphosphorylase (carboxylating) 0.50 RS_RS12320 phosphoribosylglycinamide formyltransferase — —
Klebsiella michiganensis M5al 0.47 BWI76_RS04845 nicotinate-nucleotide pyrophosphorylase 0.53 BWI76_RS20970 phosphoribosylglycinamide formyltransferase low > 92
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04070 nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.46 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 103
Variovorax sp. SCN45 0.45 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.45 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 127
Erwinia tracheiphila SCR3 0.45 LU632_RS03040 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.52 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2009.1 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.41 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 74
Lysobacter sp. OAE881 0.40 ABIE51_RS15405 carboxylating nicotinate-nucleotide diphosphorylase 0.37 ABIE51_RS15895 phosphoribosylglycinamide formyltransferase low > 62
Magnetospirillum magneticum AMB-1 0.40 AMB_RS19655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.46 AMB_RS14335 phosphoribosylglycinamide formyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_16940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.28 CA264_18635 phosphoribosylglycinamide formyltransferase — —
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS11900 carboxylating nicotinate-nucleotide diphosphorylase 0.22 ABI39_RS06315 phosphoribosylglycinamide formyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS15940 carboxylating nicotinate-nucleotide diphosphorylase 0.22 HMPREF1058_RS10780 phosphoribosylglycinamide formyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_1158 nicotinate-nucleotide pyrophosphorylase 0.26 Echvi_1470 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS16725 carboxylating nicotinate-nucleotide diphosphorylase 0.24 HMPREF1078_RS07090 phosphoribosylglycinamide formyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS14530 nicotinate-nucleotide diphosphorylase (carboxylating) 0.26 CA265_RS02710 phosphoribosylglycinamide formyltransferase — —
Caulobacter crescentus NA1000 0.37 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.38 CCNA_01774 phosphoribosylglycinamide formyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.38 CCNA_01774 phosphoribosylglycinamide formyltransferase — —
Rhodopseudomonas palustris CGA009 0.37 TX73_005415 carboxylating nicotinate-nucleotide diphosphorylase 0.37 TX73_015790 phosphoribosylglycinamide formyltransferase — —
Rhodospirillum rubrum S1H 0.36 Rru_A1432 Nicotinate-nucleotide pyrophosphorylase (NCBI) 0.49 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) — —
Bacteroides ovatus ATCC 8483 0.36 BACOVA_04303 nicotinate-nucleotide diphosphorylase (carboxylating) 0.25 BACOVA_01954 putative phosphoribosylglycinamide formyltransferase low > 94
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS10745 carboxylating nicotinate-nucleotide diphosphorylase 0.25 HMPREF1181_RS02435 phosphoribosylglycinamide formyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS00635 carboxylating nicotinate-nucleotide diphosphorylase 0.34 A4249_RS08220 phosphoribosylglycinamide formyltransferase low > 48
Agrobacterium fabrum C58 0.36 Atu4096 nicotinate-nucleotide pyrophosphorylase 0.41 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 0.74 33
Rhizobium sp. OAE497 0.35 ABIE40_RS23265 carboxylating nicotinate-nucleotide diphosphorylase 0.47 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase 0.51 101
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_0061 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.37 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Bacteroides thetaiotaomicron VPI-5482 0.35 BT1560 nicotinate-nucleotide pyrophosphorylase (NCBI ptt file) 0.25 BT3360 phosphoribosylglycinamide formyltransferase (NCBI ptt file) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS15695 carboxylating nicotinate-nucleotide diphosphorylase 0.23 ABZR88_RS01870 phosphoribosylglycinamide formyltransferase — —
Azospirillum sp. SherDot2 0.35 MPMX19_05672 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.43 MPMX19_01305 Phosphoribosylglycinamide formyltransferase — —
Sinorhizobium meliloti 1021 0.34 SMc02598 nicotinate-nucleotide pyrophosphorylase carboxylating protein 0.46 SMc00614 phosphoribosylglycinamide formyltransferase low > 103
Phaeobacter inhibens DSM 17395 0.33 PGA1_c27810 nicotinate-nucleotide pyrophosphorylase 0.43 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN low > 62
Mycobacterium tuberculosis H37Rv 0.32 Rv1596 Probable nicotinate-nucleotide pyrophosphatase NadC 0.25 Rv0956 Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase) — —
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_0951 nadC nicotinate-nucleotide pyrophosphorylase 0.31 Synpcc7942_0958 purN phosphoribosylglycinamide formyltransferase low > 38
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU1807 nadC nicotinate-nucleotide pyrophosphorylase (TIGR) 0.42 DVU0736 purN phosphoribosylglycinamide formyltransferase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_0524 nicotinate-nucleotide pyrophosphorylase (RefSeq) 0.35 DvMF_2769 phosphoribosylglycinamide formyltransferase (RefSeq) — —

Not shown: 5 genomes with orthologs for PS417_03925 only; 4 genomes with orthologs for PS417_20125 only