Conservation of cofitness between Psest_0306 and Psest_2589 in Pseudomonas stutzeri RCH2

90 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 1.0 Psest_2589 3-isopropylmalate dehydrogenase 0.54 16
Pseudomonas putida KT2440 0.85 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.87 PP_1988 3-isopropylmalate dehydrogenase 0.43 43
Pseudomonas sp. S08-1 0.85 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.91 OH686_04470 3-isopropylmalate dehydrogenase low > 80
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.88 AO353_20635 3-isopropylmalate dehydrogenase 0.66 24
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.88 Psyr_1985 3-isopropylmalate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.88 Psyr_1985 3-isopropylmalate dehydrogenase low > 86
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.89 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.77 29
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.84 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 PFLU_RS20565 3-isopropylmalate dehydrogenase low > 109
Pseudomonas sp. RS175 0.83 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.87 PFR28_02821 3-isopropylmalate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.83 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.88 AO356_21415 3-isopropylmalate dehydrogenase 0.30 95
Pseudomonas fluorescens FW300-N2E2 0.83 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.88 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.44 45
Pseudomonas simiae WCS417 0.83 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.87 PS417_18585 3-isopropylmalate dehydrogenase 0.25 55
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.88 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.48 54
Marinobacter adhaerens HP15 0.68 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.69 HP15_1832 3-isopropylmalate dehydrogenase low > 73
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0179 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.69 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.42 ABZR86_RS15950 3-isopropylmalate dehydrogenase low > 74
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.44 LRK54_RS10325 3-isopropylmalate dehydrogenase low > 59
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.44 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase low > 52
Rhodanobacter denitrificans MT42 0.59 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.44 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.83 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.59 46
Paraburkholderia graminis OAS925 0.49 ABIE53_000580 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.62 ABIE53_004804 3-isopropylmalate dehydrogenase low > 113
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.62 BPHYT_RS33900 3-isopropylmalate dehydrogenase low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.63 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 90
Dechlorosoma suillum PS 0.49 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.67 Dsui_3198 3-isopropylmalate dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.62 H281DRAFT_06072 3-isopropylmalate dehydrogenase low > 103
Lysobacter sp. OAE881 0.48 ABIE51_RS05265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.48 ABIE51_RS17585 3-isopropylmalate dehydrogenase low > 62
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.62 QEN71_RS17620 3-isopropylmalate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.63 ABZR87_RS14530 3-isopropylmalate dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.47 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.62 RPSI07_RS14705 3-isopropylmalate dehydrogenase low > 81
Variovorax sp. SCN45 0.47 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.63 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 127
Acidovorax sp. GW101-3H11 0.47 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.63 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 79
Ralstonia solanacearum UW163 0.46 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.62 UW163_RS11115 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.62 RALBFv3_RS02610 3-isopropylmalate dehydrogenase low > 76
Ralstonia solanacearum GMI1000 0.46 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.62 RS_RS09990 3-isopropylmalate dehydrogenase low > 80
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS12250 adenosylmethionine--8-amino-7-oxononanoate aminotransferase 0.63 HSERO_RS16500 3-isopropylmalate dehydrogenase low > 78
Desulfovibrio vulgaris Miyazaki F 0.45 DvMF_1002 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.61 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) low > 51
Variovorax sp. OAS795 0.45 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.63 ABID97_RS08455 3-isopropylmalate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.62 RR42_RS14385 3-isopropylmalate dehydrogenase low > 128
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS07530 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.49 CA265_RS15850 3-isopropylmalate dehydrogenase low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_02410 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.44 CA264_09445 3-isopropylmalate dehydrogenase low > 74
Rahnella sp. WP5 0.34 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 EX31_RS03685 3-isopropylmalate dehydrogenase low > 89
Serratia liquefaciens MT49 0.34 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 IAI46_03350 3-isopropylmalate dehydrogenase low > 86
Magnetospirillum magneticum AMB-1 0.33 AMB_RS13895 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.55 AMB_RS20570 3-isopropylmalate dehydrogenase — —
Pectobacterium carotovorum WPP14 0.33 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 HER17_RS03080 3-isopropylmalate dehydrogenase low > 75
Enterobacter asburiae PDN3 0.33 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.53 EX28DRAFT_3669 3-isopropylmalate dehydrogenase low > 76
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_0031 bioA aminotransferase 0.56 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase — —
Enterobacter sp. TBS_079 0.32 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.53 MPMX20_00768 3-isopropylmalate dehydrogenase low > 85
Rhodopseudomonas palustris CGA009 0.32 TX73_015405 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 TX73_001175 3-isopropylmalate dehydrogenase — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS31120 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.53 AZOBR_RS14130 3-isopropylmalate dehydrogenase low > 97
Acinetobacter radioresistens SK82 0.32 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.70 MPMX26_00348 3-isopropylmalate dehydrogenase low > 36
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS17955 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.42 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.67 27
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.52 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) low > 78
Phocaeicola dorei CL03T12C01 0.32 ABI39_RS14245 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.42 ABI39_RS10215 3-isopropylmalate dehydrogenase low > 72
Dickeya dadantii 3937 0.32 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 DDA3937_RS18120 3-isopropylmalate dehydrogenase low > 74
Klebsiella michiganensis M5al 0.32 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.53 BWI76_RS04675 3-isopropylmalate dehydrogenase low > 92
Pantoea sp. MT58 0.32 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.49 IAI47_16005 3-isopropylmalate dehydrogenase low > 76
Alteromonas macleodii MIT1002 0.32 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.50 MIT1002_00948 3-isopropylmalate dehydrogenase low > 70
Erwinia tracheiphila SCR3 0.32 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.48 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase — —
Methanococcus maripaludis S2 0.32 MMP_RS04500 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.27 MMP_RS02855 3-isopropylmalate dehydrogenase — —
Dickeya dianthicola ME23 0.32 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.61 30
Dickeya dianthicola 67-19 0.31 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.65 38
Escherichia fergusonii Becca 0.31 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.52 EFB2_03972 3-isopropylmalate dehydrogenase low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 ECOLIN_RS00395 3-isopropylmalate dehydrogenase low > 52
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS15295 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.44 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.83 19
Escherichia coli ECOR38 0.31 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.51 OHPLBJKB_03584 3-isopropylmalate dehydrogenase low > 73
Escherichia coli BW25113 0.31 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) 0.51 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.26 61
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.51 CSW01_12600 3-isopropylmalate dehydrogenase low > 62
Escherichia coli BL21 0.31 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 0.51 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent low > 60
Methanococcus maripaludis JJ 0.31 MMJJ_RS00645 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.29 MMJJ_RS02220 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC102 0.31 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC62 0.31 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 BNILDI_08545 leuA 2-isopropylmalate synthase — —
Escherichia coli ECRC101 0.31 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECOR27 0.31 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.51 NOLOHH_03065 leuA 2-isopropylmalate synthase low > 57
Escherichia coli ECRC99 0.31 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC101 0.31 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase — —
Escherichia coli ECRC98 0.31 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.52 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase — —
Agrobacterium fabrum C58 0.31 Atu4000 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.56 Atu2791 3-isopropylmalate dehydrogenase 0.57 58
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3674 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.55 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.33 67
Shewanella oneidensis MR-1 0.30 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.51 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) — —
Rhizobium sp. OAE497 0.30 ABIE40_RS21060 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.57 ABIE40_RS19050 3-isopropylmalate dehydrogenase low > 107
Shewanella sp. ANA-3 0.30 Shewana3_2520 aminotransferase (RefSeq) 0.51 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_2790 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.43 Echvi_2062 3-isopropylmalate dehydrogenase — —
Mycobacterium tuberculosis H37Rv 0.28 Rv1568 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA 0.28 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) — —
Shewanella loihica PV-4 0.28 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.51 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.28 PGA1_c09150 adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA 0.59 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB low > 62
Shewanella amazonensis SB2B 0.28 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.51 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) — —
Castellaniella sp019104865 MT123 0.28 ABCV34_RS15300 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.62 ABCV34_RS04280 3-isopropylmalate dehydrogenase low > 48
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.50 CCNA_00193 3-isopropylmalate dehydrogenase low > 67
Caulobacter crescentus NA1000 0.25 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.50 CCNA_00193 3-isopropylmalate dehydrogenase low > 66

Not shown: 1 genomes with orthologs for Psest_0306 only; 12 genomes with orthologs for Psest_2589 only