Conservation of cofitness between Dsui_0311 and Dsui_3072 in Dechlorosoma suillum PS

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dechlorosoma suillum PS 1.0 Dsui_0311 ATP-dependent DNA helicase RecG 1.0 Dsui_3072 DNA repair protein RecN 0.84 7
Ralstonia solanacearum UW163 0.59 UW163_RS07950 DNA helicase RecG 0.50 UW163_RS08210 DNA repair protein RecN — —
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS05675 DNA helicase RecG 0.50 RALBFv3_RS05415 DNA repair protein RecN 0.50 13
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS17390 ATP-dependent DNA helicase RecG 0.47 RR42_RS05910 DNA repair protein 0.45 17
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.48 ABZR87_RS01065 DNA repair protein RecN low > 80
Ralstonia solanacearum PSI07 0.58 RPSI07_RS11625 DNA helicase RecG 0.49 RPSI07_RS11890 DNA repair protein RecN low > 81
Ralstonia solanacearum GMI1000 0.58 RS_RS13565 DNA helicase RecG 0.49 RS_RS13275 DNA repair protein RecN — —
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.48 BPHYT_RS03560 DNA repair protein low > 109
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.50 QEN71_RS26535 DNA repair protein RecN — —
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.52 HSERO_RS03060 DNA repair protein 0.34 70
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.48 H281DRAFT_04692 DNA replication and repair protein RecN low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_000833 ATP-dependent DNA helicase RecG 0.48 ABIE53_000856 DNA repair protein RecN (Recombination protein N) low > 113
Acidovorax sp. GW101-3H11 0.51 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.41 Ac3H11_3460 DNA repair protein RecN low > 79
Castellaniella sp019104865 MT123 0.49 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.44 ABCV34_RS07470 DNA repair protein RecN low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.43 GFF829 DNA repair protein RecN low > 90
Variovorax sp. SCN45 0.48 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.42 GFF2357 DNA repair protein RecN low > 127
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.38 Pf1N1B4_1178 DNA repair protein RecN low > 87
Pseudomonas stutzeri RCH2 0.46 Psest_4192 ATP-dependent DNA helicase RecG 0.37 Psest_0962 DNA repair protein RecN — —
Pseudomonas putida KT2440 0.46 PP_5310 junction-specific ATP-dependent DNA helicase 0.36 PP_4729 factor used in recombination and DNA repair low > 96
Acinetobacter radioresistens SK82 0.46 MPMX26_02732 ATP-dependent DNA helicase RecG 0.32 MPMX26_00239 DNA repair protein RecN low > 36
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.38 PfGW456L13_5106 DNA repair protein RecN 0.36 53
Lysobacter sp. OAE881 0.45 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.31 ABIE51_RS11655 DNA repair protein RecN 0.75 29
Pseudomonas fluorescens SBW25 0.45 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.37 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.37 PFLU_RS25910 DNA repair protein RecN 0.32 64
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_09320 ATP-dependent DNA helicase RecG 0.38 AO353_05660 DNA repair protein RecN 0.46 23
Pseudomonas simiae WCS417 0.45 PS417_27870 ATP-dependent DNA helicase RecG 0.37 PS417_24070 recombination and repair protein low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0201 ATP-dependent DNA helicase RecG 0.38 Psyr_4197 DNA replication and repair protein RecN low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0201 ATP-dependent DNA helicase RecG 0.38 Psyr_4197 DNA replication and repair protein RecN 0.47 8
Pseudomonas sp. S08-1 0.45 OH686_13505 ATP-dependent DNA helicase RecG 0.40 OH686_17050 DNA repair protein RecN low > 80
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_12380 ATP-dependent DNA helicase RecG 0.37 AO356_07510 DNA repair protein RecN 0.47 12
Pseudomonas sp. RS175 0.45 PFR28_04435 ATP-dependent DNA helicase RecG 0.38 PFR28_00071 DNA repair protein RecN low > 88
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.39 Pf6N2E2_3370 DNA repair protein RecN 0.46 11
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.36 ABZR86_RS05665 DNA repair protein RecN 0.84 10
Shewanella loihica PV-4 0.44 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.37 Shew_1196 recombination and repair protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.44 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.39 Shewana3_1104 recombination and repair protein (RefSeq) 0.56 8
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.34 LRK54_RS17960 DNA repair protein RecN low > 59
Rhodanobacter denitrificans MT42 0.44 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.34 LRK55_RS17815 DNA repair protein RecN low > 63
Shewanella oneidensis MR-1 0.43 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.39 SO3462 recN DNA repair protein RecN (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.43 MIT1002_00111 ATP-dependent DNA helicase RecG 0.34 MIT1002_01443 Recombination protein N low > 70
Escherichia coli ECRC102 0.43 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 0.36 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli ECRC99 0.43 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 0.36 KEDOAH_07075 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.43 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.36 MCAODC_11670 recN DNA repair protein RecN — —
Escherichia coli ECRC98 0.43 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 0.36 JDDGAC_24810 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.43 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 0.36 OKFHMN_21145 recN DNA repair protein RecN — —
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.35 OKGIIK_07340 recN DNA repair protein RecN low > 52
Pantoea sp. MT58 0.43 IAI47_00500 ATP-dependent DNA helicase RecG 0.38 IAI47_04810 DNA repair protein RecN low > 76
Rahnella sp. WP5 0.43 EX31_RS15820 ATP-dependent DNA helicase RecG 0.37 EX31_RS21760 DNA repair protein RecN low > 89
Escherichia coli ECOR38 0.43 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.36 HEPCGN_20265 recN DNA repair protein RecN low > 85
Escherichia coli Nissle 1917 0.43 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.36 ECOLIN_RS14775 DNA repair protein RecN low > 52
Escherichia fergusonii Becca 0.43 EFB2_00136 ATP-dependent DNA helicase RecG 0.36 EFB2_01277 DNA repair protein RecN low > 86
Shewanella amazonensis SB2B 0.43 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.39 Sama_1026 recombination and repair protein (RefSeq) 0.37 55
Escherichia coli ECRC62 0.43 BNILDI_04090 recG ATP-dependent DNA helicase RecG 0.36 BNILDI_11620 recN DNA repair protein RecN — —
Marinobacter adhaerens HP15 0.43 HP15_309 DNA helicase, ATP-dependent, RecG 0.42 HP15_3084 DNA repair protein RecN 0.85 2
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.40 B158DRAFT_0601 DNA replication and repair protein RecN low > 40
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 0.36 OHPLBJKB_01091 DNA repair protein RecN low > 73
Escherichia coli BL21 0.42 ECD_03509 ATP-dependent DNA helicase 0.36 ECD_02504 recombination and repair protein low > 60
Escherichia coli ECOR27 0.42 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 0.36 NOLOHH_12815 recN DNA repair protein RecN low > 57
Escherichia coli BW25113 0.42 b3652 recG ATP-dependent DNA helicase (NCBI) 0.36 b2616 recN recombination and repair protein (NCBI) 0.61 3
Dickeya dianthicola ME23 0.42 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.36 DZA65_RS04235 DNA repair protein RecN low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.37 GFF4162 DNA repair protein RecN low > 78
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.31 Xcc-8004.3431.1 DNA repair protein RecN low > 74
Erwinia tracheiphila SCR3 0.42 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.34 LU632_RS16985 recN DNA repair protein RecN low > 74
Dickeya dadantii 3937 0.42 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.36 DDA3937_RS04325 DNA repair protein RecN low > 74
Dickeya dianthicola 67-19 0.42 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.36 HGI48_RS04320 DNA repair protein RecN low > 71
Enterobacter sp. TBS_079 0.42 MPMX20_00084 ATP-dependent DNA helicase RecG 0.38 MPMX20_03486 DNA repair protein RecN low > 85
Serratia liquefaciens MT49 0.41 IAI46_24905 ATP-dependent DNA helicase RecG 0.37 IAI46_19635 DNA repair protein RecN 0.47 53
Pectobacterium carotovorum WPP14 0.41 HER17_RS21395 ATP-dependent DNA helicase RecG 0.36 HER17_RS17420 DNA repair protein RecN low > 75
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.37 EX28DRAFT_2719 DNA repair protein RecN low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS27440 DNA helicase RecG 0.37 BWI76_RS21560 DNA repair protein RecN low > 92
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_13680 DNA helicase RecG 0.39 CSW01_04395 DNA repair protein RecN low > 62
Agrobacterium fabrum C58 0.34 Atu1780 ATP-dependent DNA helicase 0.31 Atu2083 DNA repair protein RecN 0.52 18
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_01504 ATP-dependent DNA helicase recG 0.21 CCNA_02062 DNA repair protein recN low > 67
Caulobacter crescentus NA1000 0.34 CCNA_01504 ATP-dependent DNA helicase recG 0.21 CCNA_02062 DNA repair protein recN low > 66
Sinorhizobium meliloti 1021 0.33 SMc00228 ATP-dependent DNA helicase RecG 0.31 SMc01877 DNA repair protein 0.69 9
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG 0.24 HMPREF1058_RS18225 DNA repair protein RecN low > 67
Magnetospirillum magneticum AMB-1 0.33 AMB_RS12400 ATP-dependent DNA helicase RecG 0.31 AMB_RS19520 DNA repair protein RecN — —
Azospirillum sp. SherDot2 0.33 MPMX19_00951 ATP-dependent DNA helicase RecG 0.26 MPMX19_01601 DNA repair protein RecN — —
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02470 ATP-dependent DNA helicase RecG 0.24 ABI39_RS14500 DNA repair protein RecN low > 72
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG 0.21 Synpcc7942_1779 recN DNA repair protein RecN — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.26 AZOBR_RS12395 DNA repair protein RecN — —
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS12765 ATP-dependent DNA helicase RecG 0.27 HMPREF1078_RS02000 DNA repair protein RecN — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) 0.22 Dshi_2413 DNA repair protein RecN (RefSeq) 0.26 34
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG 0.24 HMPREF1181_RS10900 DNA repair protein RecN low > 56
Bacteroides thetaiotaomicron VPI-5482 0.32 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) 0.25 BT1361 DNA repair protein recN (Recombination protein N) (NCBI ptt file) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_1162 ATP-dependent DNA helicase RecG 0.22 Echvi_2067 DNA repair protein RecN 0.76 12
Phaeobacter inhibens DSM 17395 0.32 PGA1_c14380 ATP-dependent DNA helicase RecG 0.25 PGA1_c09720 DNA repair protein RecN 0.47 11
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_15020 DNA helicase RecG 0.21 CA264_13235 DNA repair protein RecN 0.51 21
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS04765 ATP-dependent DNA helicase RecG 0.21 A4249_RS02620 DNA repair protein RecN low > 48
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS17240 ATP-dependent DNA helicase RecG 0.26 ABZR88_RS06580 DNA repair protein RecN low > 71
Bosea sp. OAE506 0.31 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.25 ABIE41_RS12645 DNA repair protein RecN 0.49 12
Rhodopseudomonas palustris CGA009 0.30 TX73_013795 ATP-dependent DNA helicase RecG 0.25 TX73_018240 DNA repair protein RecN 0.42 8
Fusobacterium nucleatum SB010 0.30 HUW76_01465 ATP-dependent DNA helicase RecG 0.24 HUW76_08055 DNA repair protein RecN low > 35
Rhodospirillum rubrum S1H 0.30 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) 0.24 Rru_A0940 DNA repair protein RecN (NCBI) — —
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS22835 ATP-dependent DNA helicase RecG 0.23 CA265_RS14855 DNA repair protein RecN 0.69 12
Mycobacterium tuberculosis H37Rv 0.25 Rv2973c Probable ATP-dependent DNA helicase RecG 0.18 Rv1696 Probable DNA repair protein RecN (recombination protein N) low > 58

Not shown: 2 genomes with orthologs for Dsui_0311 only; 5 genomes with orthologs for Dsui_3072 only