Conservation of cofitness between CSW01_13680 and CSW01_12770 in Vibrio cholerae E7946 ATCC 55056

102 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13680 DNA helicase RecG 1.0 CSW01_12770 ABC transporter permease 0.74 9
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS18845 ATP-dependent DNA helicase RecG 0.76 PagCFBP13505_RS09305 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.72 8
Pantoea sp. MT58 0.70 IAI47_00500 ATP-dependent DNA helicase RecG 0.76 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 76
Serratia liquefaciens MT49 0.69 IAI46_24905 ATP-dependent DNA helicase RecG 0.79 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 87
Klebsiella pneumoniae MKP103 0.69 KDGMDA_08135 ATP-dependent DNA helicase RecG 0.76 KDGMDA_06040 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.46 45
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.75 GFF2938 Uncharacterized ABC transporter, permease component YrbE low > 78
Erwinia amylovora T8 0.69 OLJFJH_05550 ATP-dependent DNA helicase RecG 0.75 OLJFJH_07110 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 58
Escherichia coli ECRC99 0.69 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 0.76 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli ECRC100 0.69 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 0.76 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 79
Dickeya dadantii 3937 0.69 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.78 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 74
Escherichia coli ECRC102 0.69 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 0.76 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 80
Escherichia coli ECRC101 0.69 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.76 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 87
Escherichia coli ECRC98 0.69 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 0.76 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 87
Escherichia coli ECOR38 0.68 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.76 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 88
Escherichia coli ECOR27 0.68 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 0.76 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 0.76 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE low > 74
Escherichia fergusonii Becca 0.68 EFB2_00136 ATP-dependent DNA helicase RecG 0.76 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE low > 86
Escherichia coli ECRC62 0.68 BNILDI_04090 recG ATP-dependent DNA helicase RecG 0.76 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Escherichia coli Nissle 1917 0.68 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.76 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 55
Escherichia coli BW25113 0.68 b3652 recG ATP-dependent DNA helicase (NCBI) 0.76 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli BL21 0.68 ECD_03509 ATP-dependent DNA helicase 0.76 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein low > 61
Klebsiella michiganensis M5al 0.68 BWI76_RS27440 DNA helicase RecG 0.75 BWI76_RS25225 ABC transporter permease low > 92
Enterobacter sp. TBS_079 0.68 MPMX20_00084 ATP-dependent DNA helicase RecG 0.77 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE low > 85
Dickeya dianthicola ME23 0.68 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.78 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.78 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 71
Pectobacterium carotovorum WPP14 0.68 HER17_RS21395 ATP-dependent DNA helicase RecG 0.79 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.76 EX28DRAFT_3248 ABC transport permease subunit low > 76
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_08345 recG ATP-dependent DNA helicase RecG 0.76 IJEDHG_13785 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Erwinia tracheiphila SCR3 0.67 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.76 LU632_RS21240 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.35 67
Rahnella sp. WP5 0.67 EX31_RS15820 ATP-dependent DNA helicase RecG 0.77 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 89
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.71 Sama_3080 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.65 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.68 Shew_3303 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.69 Shewana3_0679 hypothetical protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.64 MIT1002_00111 ATP-dependent DNA helicase RecG 0.73 MIT1002_00835 putative phospholipid ABC transporter permease protein MlaE low > 70
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.70 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) low > 76
Pseudomonas segetis P6 0.57 ACVTMO_RS00200 recG ATP-dependent DNA helicase RecG 0.67 ACVTMO_RS19085 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Pseudomonas stutzeri RCH2 0.57 Psest_4192 ATP-dependent DNA helicase RecG 0.66 Psest_3306 conserved hypothetical integral membrane protein
Pseudomonas sp. BP01 0.56 JOY50_RS08945 recG ATP-dependent DNA helicase RecG 0.65 JOY50_RS11165 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 84
Pseudomonas sp. S08-1 0.56 OH686_13505 ATP-dependent DNA helicase RecG 0.66 OH686_08505 Phospholipid ABC transporter permease protein MlaE low > 80
Pseudomonas putida KT2440 0.56 PP_5310 junction-specific ATP-dependent DNA helicase 0.65 PP_0959 phospholipid ABC transporter low > 96
Pseudomonas aeruginosa PUPa3 0.55 DQ20_RS49510 recG;go_function=nucleic ATP-dependent DNA helicase RecG 0.67 DQ20_RS56660 mlaE;go_component=ATP-binding lipid asymmetry maintenance ABC transporter permease subunit MlaE
Pseudomonas aeruginosa MRSN321 0.55 DY961_RS12615 recG;go_function=nucleic ATP-dependent DNA helicase RecG 0.67 DY961_RS24200 mlaE;go_component=ATP-binding lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 100
Pseudomonas aeruginosa PA14 0.55 IKLFDK_26730 ATP-dependent DNA helicase RecG 0.67 IKLFDK_01810 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 98
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.63 Pf1N1B4_1073 Uncharacterized ABC transporter, permease component YrbE
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.64 PfGW456L13_5007 Uncharacterized ABC transporter, permease component YrbE
Pseudomonas sp. RS175 0.55 PFR28_04435 ATP-dependent DNA helicase RecG 0.64 PFR28_00180 Intermembrane phospholipid transport system permease protein MlaE low > 88
Pseudomonas sp. DMC3 0.55 GFF427 ATP-dependent DNA helicase RecG 0.65 GFF1835 Intermembrane phospholipid transport system permease protein MlaE low > 89
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.62 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.62 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.60 70
Pseudomonas simiae WCS417 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.63 PS417_04380 ABC transporter permease low > 88
Pseudomonas orientalis W4I3 0.55 QF045_RS02225 ATP-dependent DNA helicase RecG 0.62 QF045_RS07370 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 93
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.65 Pf6N2E2_3259 Uncharacterized ABC transporter, permease component YrbE
Marinobacter adhaerens HP15 0.55 HP15_309 DNA helicase, ATP-dependent, RecG 0.68 HP15_2435 ABC-type transport system involved in resistance to organic solvents, permease component low > 73
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_00042 ATP-dependent DNA helicase RecG 0.63 GEMAOFIL_01082 Intermembrane phospholipid transport system permease protein MlaE low > 96
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_12380 ATP-dependent DNA helicase RecG 0.65 AO356_07000 ABC transporter permease low > 104
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.64 AO353_05145 ABC transporter permease low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.66 Psyr_4140 Protein of unknown function DUF140 low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.66 Psyr_4140 Protein of unknown function DUF140 low > 86
Pseudomonas sp. SVBP6 0.55 COO64_RS01595 recG ATP-dependent DNA helicase RecG 0.66 COO64_RS04320 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 93
Lysobacter sp. OAE881 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.39 ABIE51_RS01010 MlaE family lipid ABC transporter permease subunit low > 62
Acinetobacter radioresistens SK82 0.52 MPMX26_02732 ATP-dependent DNA helicase RecG 0.59 MPMX26_02740 Intermembrane phospholipid transport system permease protein MlaE low > 36
Acinetobacter baumannii LAC-4 0.52 RR41_RS02075 ATP-dependent DNA helicase RecG 0.56 RR41_RS02035 lipid asymmetry maintenance ABC transporter permease subunit MlaE
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS16735 ATP-dependent DNA helicase RecG 0.50 LRK53_RS16775 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 59
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.44 Xcc-8004.5365.1 Uncharacterized ABC transporter, permease component YrbE low > 74
Rhodanobacter denitrificans MT42 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.50 LRK55_RS11490 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 63
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.50 ABZR86_RS11880 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 74
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.50 LRK54_RS11765 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 59
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.49 OKGIIK_12130 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 53
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS17390 ATP-dependent DNA helicase RecG 0.57 RR42_RS18965 ABC transporter permease low > 128
Methylophilus sp. DMC18 0.45 GFF2125 ATP-dependent DNA helicase RecG 0.55 GFF1552 Intermembrane phospholipid transport system permease protein MlaE
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS05675 DNA helicase RecG 0.55 RALBFv3_RS06895 ABC transporter permease
Ralstonia solanacearum UW163 0.45 UW163_RS07950 DNA helicase RecG 0.55 UW163_RS06720 ABC transporter permease
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.55 ABZR87_RS02550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.61 18
Ralstonia solanacearum PSI07 0.45 RPSI07_RS11625 DNA helicase RecG 0.54 RPSI07_RS10340 ABC transporter permease low > 81
Ralstonia solanacearum GMI1000 0.45 RS_RS13565 DNA helicase RecG 0.56 RS_RS14840 ABC transporter permease
Paraburkholderia graminis OAS925 0.44 ABIE53_000833 ATP-dependent DNA helicase RecG 0.56 ABIE53_003711 phospholipid/cholesterol/gamma-HCH transport system permease protein low > 113
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.51 BPHYT_RS17760 ABC transporter permease low > 109
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.48 HSERO_RS20395 ABC transporter permease
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.55 H281DRAFT_05642 phospholipid/cholesterol/gamma-HCH transport system permease protein low > 103
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.53 QEN71_RS27915 lipid asymmetry maintenance ABC transporter permease subunit MlaE
Acidovorax sp. GW101-3H11 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.55 Ac3H11_4713 Uncharacterized ABC transporter, permease component YrbE low > 79
Dechlorosoma suillum PS 0.42 Dsui_0311 ATP-dependent DNA helicase RecG 0.53 Dsui_1399 conserved hypothetical integral membrane protein low > 51
Castellaniella sp019104865 MT123 0.41 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.51 ABCV34_RS11185 lipid asymmetry maintenance ABC transporter permease subunit MlaE
Variovorax sp. OAS795 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.55 ABID97_RS23210 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.51 GFF1324 Uncharacterized ABC transporter, permease component YrbE low > 90
Variovorax sp. SCN45 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.54 GFF5335 Phospholipid ABC transporter permease protein MlaE 0.77 110
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG 0.25 Synpcc7942_0378 ycf63 Protein of unknown function DUF140
Azospirillum sp. SherDot2 0.34 MPMX19_00951 ATP-dependent DNA helicase RecG 0.29 MPMX19_06141 Intermembrane phospholipid transport system permease protein MlaE
Magnetospirillum magneticum AMB-1 0.34 AMB_RS12400 ATP-dependent DNA helicase RecG 0.29 AMB_RS10570 ABC transporter permease
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS08295 ATP-dependent DNA helicase RecG 0.17 HMPREF1058_RS03105 ABC transporter permease low > 67
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02470 ATP-dependent DNA helicase RecG 0.17 ABI39_RS02350 ABC transporter permease low > 72
Azospirillum brasilense Sp245 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.29 AZOBR_RS08345 ABC transporter permease low > 97
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS06615 ATP-dependent DNA helicase RecG 0.18 HMPREF1181_RS07475 ABC transporter permease low > 56
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS12765 ATP-dependent DNA helicase RecG 0.19 HMPREF1078_RS17075 ABC transporter permease
Bacteroides thetaiotaomicron VPI-5482 0.33 BT3924 ATP-dependent DNA helicase recG (NCBI ptt file) 0.17 BT3838 conserved hypothetical protein (NCBI ptt file)
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01504 ATP-dependent DNA helicase recG 0.27 CCNA_03809 organic solvent resistance transport system permease low > 67
Caulobacter crescentus NA1000 0.33 CCNA_01504 ATP-dependent DNA helicase recG 0.27 CCNA_03809 organic solvent resistance transport system permease low > 66
Phaeobacter inhibens DSM 17395 0.32 PGA1_c14380 ATP-dependent DNA helicase RecG 0.23 PGA1_c10870 conserved hypothetical integral membrane protein low > 62
Cellulophaga baltica 18 0.32 M666_RS15340 ATP-dependent DNA helicase RecG 0.14 M666_RS01630 ABC transporter permease
Dinoroseobacter shibae DFL-12 0.32 Dshi_1510 DEAD/DEAH box helicase domain protein (RefSeq) 0.22 Dshi_2379 protein of unknown function DUF140 (RefSeq) low > 64
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS22835 ATP-dependent DNA helicase RecG 0.20 CA265_RS16015 ABC transporter permease low > 88
Rhodospirillum rubrum S1H 0.29 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) 0.29 Rru_A0408 Protein of unknown function DUF140 (NCBI)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.29 ABZR88_RS17240 ATP-dependent DNA helicase RecG 0.24 ABZR88_RS04925 ABC transporter permease low > 71

Not shown: 14 genomes with orthologs for CSW01_13680 only; 4 genomes with orthologs for CSW01_12770 only