Conservation of cofitness between CSW01_00015 and CSW01_02490 in Vibrio cholerae E7946 ATCC 55056

106 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 1.0 CSW01_02490 glutathione synthetase 0.90 17
Klebsiella michiganensis M5al 0.77 BWI76_RS00050 tRNA modification GTPase 0.75 BWI76_RS24075 glutathione synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.76 GFF3049 Glutathione synthetase (EC 6.3.2.3) low > 78
Escherichia coli ECRC101 0.76 MCAODC_05495 tRNA modification GTPase MnmE 0.76 MCAODC_09795 gshB glutathione synthase — —
Escherichia coli ECRC102 0.76 NIAGMN_12740 tRNA modification GTPase MnmE 0.76 NIAGMN_17040 gshB glutathione synthase — —
Escherichia coli ECRC98 0.76 JDDGAC_18605 tRNA modification GTPase MnmE 0.76 JDDGAC_22905 gshB glutathione synthase — —
Escherichia coli ECRC100 0.76 OKFHMN_14985 tRNA modification GTPase MnmE 0.76 OKFHMN_19275 gshB glutathione synthase — —
Escherichia coli ECRC99 0.76 KEDOAH_13165 tRNA modification GTPase MnmE 0.76 KEDOAH_08865 gshB glutathione synthase — —
Escherichia coli Nissle 1917 0.76 ECOLIN_RS21345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.76 ECOLIN_RS16395 glutathione synthase — —
Escherichia fergusonii Becca 0.76 EFB2_04925 tRNA modification GTPase MnmE 0.76 EFB2_00955 Glutathione synthetase low > 86
Dickeya dadantii 3937 0.76 DDA3937_RS21310 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.77 DDA3937_RS18560 glutathione synthase low > 74
Escherichia coli ECOR38 0.76 HEPCGN_13680 tRNA modification GTPase MnmE 0.76 HEPCGN_18580 gshB glutathione synthase low > 88
Escherichia coli BW25113 0.76 b3706 trmE tRNA modification GTPase (NCBI) 0.76 b2947 gshB glutathione synthetase (NCBI) 0.33 47
Escherichia coli ECRC62 0.76 BNILDI_04405 tRNA modification GTPase MnmE 0.76 BNILDI_09725 gshB glutathione synthase low > 75
Escherichia coli ECOR27 0.76 NOLOHH_07125 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.76 NOLOHH_11145 gshB glutathione synthase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_04346 tRNA modification GTPase MnmE 0.76 OHPLBJKB_00771 Glutathione synthetase — —
Escherichia coli BL21 0.76 ECD_03590 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase 0.76 ECD_02777 glutathione synthetase low > 61
Pectobacterium carotovorum WPP14 0.75 HER17_RS21825 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.78 HER17_RS02635 glutathione synthase low > 75
Shewanella amazonensis SB2B 0.75 Sama_0008 trmE tRNA modification GTPase TrmE (RefSeq) 0.71 Sama_0574 glutathione synthetase (RefSeq) — —
Enterobacter asburiae PDN3 0.75 EX28DRAFT_3993 tRNA modification GTPase TrmE 0.75 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) — —
Enterobacter sp. TBS_079 0.75 MPMX20_04650 tRNA modification GTPase MnmE 0.76 MPMX20_03805 Glutathione synthetase low > 85
Klebsiella pneumoniae MKP103 0.75 KDGMDA_08700 tRNA modification GTPase MnmE 0.75 KDGMDA_04590 glutathione synthase low > 95
Serratia liquefaciens MT49 0.75 IAI46_25250 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.80 IAI46_21390 glutathione synthase low > 87
Dickeya dianthicola ME23 0.75 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.76 DZA65_RS19630 glutathione synthase low > 75
Rahnella sp. WP5 0.75 EX31_RS06000 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.77 EX31_RS02665 glutathione synthase low > 89
Dickeya dianthicola 67-19 0.75 HGI48_RS21710 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.76 HGI48_RS18495 glutathione synthase low > 71
Shewanella sp. ANA-3 0.75 Shewana3_0005 trmE tRNA modification GTPase TrmE (RefSeq) 0.71 Shewana3_3445 glutathione synthetase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.75 SO0003 trmE tRNA modification GTPase TrmE (NCBI ptt file) 0.70 SO0831 gshB glutathione synthetase (NCBI ptt file) low > 76
Pantoea agglomerans CFBP13505 P0401 0.74 PagCFBP13505_RS19345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.75 PagCFBP13505_RS16080 glutathione synthase — —
Erwinia amylovora T8 0.74 OLJFJH_05190 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.76 OLJFJH_08570 glutathione synthase — —
Pantoea sp. MT58 0.73 IAI47_18830 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.74 IAI47_03615 glutathione synthase low > 76
Shewanella loihica PV-4 0.73 Shew_3865 trmE tRNA modification GTPase TrmE (RefSeq) 0.73 Shew_3225 glutathione synthetase (RefSeq) — —
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_09755 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.75 IJEDHG_03430 gshB glutathione synthase — —
Erwinia tracheiphila SCR3 0.73 LU632_RS25300 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.75 LU632_RS05480 gshB glutathione synthase — —
Marinobacter adhaerens HP15 0.68 HP15_3698 tRNA modification GTPase TrmE 0.62 HP15_3512 glutathione synthetase — —
Alteromonas macleodii MIT1002 0.67 MIT1002_04128 tRNA modification GTPase MnmE 0.62 MIT1002_03055 Glutathione synthetase — —
Pseudomonas aeruginosa PA14 0.66 IKLFDK_25575 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.64 IKLFDK_23385 glutathione synthase low > 98
Pseudomonas aeruginosa PUPa3 0.66 DQ20_RS58595 mnmE;go_function=GTPase tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.64 DQ20_RS37285 gshB;go_function=glutathione glutathione synthase — —
Pseudomonas aeruginosa MRSN321 0.66 DY961_RS26185 mnmE;go_function=GTPase tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.64 DY961_RS22015 gshB;go_function=glutathione glutathione synthase — —
Pseudomonas sp. BP01 0.65 JOY50_RS08375 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.65 JOY50_RS09725 gshB glutathione synthase — —
Pseudomonas putida KT2440 0.65 PP_0005 GTPase 0.66 PP_4993 Glutathione synthetase — —
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_00178 tRNA modification GTPase MnmE 0.64 GEMAOFIL_05472 Glutathione synthetase — —
Pseudomonas sp. DMC3 0.64 GFF573 tRNA modification GTPase MnmE 0.65 GFF199 Glutathione synthetase — —
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_10455 tRNA modification GTPase MnmE 0.64 AO353_08110 glutathione synthetase low > 101
Pseudomonas fluorescens SBW25 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.63 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.63 PFLU_RS28320 glutathione synthase — —
Pseudomonas stutzeri RCH2 0.64 Psest_4373 tRNA modification GTPase TrmE 0.61 Psest_0296 glutathione synthetase, prokaryotic — —
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_11660 tRNA modification GTPase MnmE 0.65 AO356_13475 glutathione synthetase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_5133 tRNA modification GTPase trmE 0.67 Psyr_0487 glutathione synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_5133 tRNA modification GTPase trmE 0.67 Psyr_0487 glutathione synthase 0.30 65
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_1933 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.64 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3) — —
Pseudomonas orientalis W4I3 0.64 QF045_RS02925 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.62 QF045_RS01075 glutathione synthase low > 93
Pseudomonas sp. RS175 0.64 PFR28_04588 tRNA modification GTPase MnmE 0.65 PFR28_04232 Glutathione synthetase — —
Pseudomonas simiae WCS417 0.64 PS417_28540 tRNA modification GTPase MnmE 0.63 PS417_26675 glutathione synthetase — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_670 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.64 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3) — —
Pseudomonas segetis P6 0.64 ACVTMO_RS01220 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.65 ACVTMO_RS03090 gshB glutathione synthase — —
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_4202 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.65 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3) — —
Pseudomonas sp. SVBP6 0.63 COO64_RS02085 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.65 COO64_RS13605 gshB glutathione synthase — —
Pseudomonas sp. S08-1 0.63 OH686_12655 tRNA modification GTPase TrmE 0.65 OH686_10915 glutathione synthase — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_0373 tRNA modification GTPase TrmE 0.59 B158DRAFT_0189 glutathione synthase (EC 6.3.2.3) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF2437 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.47 GFF2650 Glutathione synthetase (EC 6.3.2.3) — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_4264 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.47 Ac3H11_711 Glutathione synthetase (EC 6.3.2.3) 0.48 21
Acinetobacter baumannii LAC-4 0.50 RR41_RS19010 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.53 RR41_RS00820 glutathione synthase — —
Paraburkholderia graminis OAS925 0.50 ABIE53_000332 tRNA modification GTPase 0.47 ABIE53_000657 glutathione synthase — —
Variovorax sp. OAS795 0.50 ABID97_RS02655 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.49 ABID97_RS04630 glutathione synthase — —
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS19830 tRNA modification GTPase TrmE 0.46 BPHYT_RS02560 glutathione synthetase — —
Ralstonia solanacearum UW163 0.49 UW163_RS04170 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.49 UW163_RS02720 glutathione synthase — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS23950 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.48 RPSI07_RS22450 glutathione synthase — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS09410 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.49 RALBFv3_RS10860 glutathione synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_02320 tRNA modification GTPase trmE 0.46 H281DRAFT_02010 glutathione synthase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS29655 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.45 QEN71_RS01415 glutathione synthase — —
Methylophilus sp. DMC18 0.49 GFF2105 tRNA modification GTPase MnmE 0.47 GFF2174 Glutathione synthetase low > 43
Ralstonia solanacearum GMI1000 0.49 RS_RS00020 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.48 RS_RS01700 glutathione synthetase — —
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS20805 tRNA modification GTPase TrmE 0.46 RR42_RS01780 glutathione synthetase — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS05350 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.48 ABZR87_RS06710 glutathione synthase low > 80
Variovorax sp. SCN45 0.49 GFF3275 tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmE 0.47 GFF6322 Glutathione synthetase (EC 6.3.2.3) — —
Acinetobacter radioresistens SK82 0.48 MPMX26_03070 tRNA modification GTPase MnmE 0.54 MPMX26_02936 Glutathione synthetase low > 36
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS21670 tRNA modification GTPase TrmE 0.49 HSERO_RS00435 glutathione synthetase — —
Rhodanobacter denitrificans MT42 0.46 LRK55_RS08270 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.54 LRK55_RS03970 glutathione synthase — —
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS08505 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.54 LRK54_RS04200 glutathione synthase — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_15285 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.55 OKGIIK_11075 gshB glutathione synthase low > 53
Castellaniella sp019104865 MT123 0.46 ABCV34_RS11895 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.46 ABCV34_RS04795 glutathione synthase — —
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS15115 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.53 ABZR86_RS10370 glutathione synthase — —
Dechlorosoma suillum PS 0.45 Dsui_0837 tRNA modification GTPase TrmE 0.48 Dsui_0746 glutathione synthetase low > 51
Rhodanobacter sp000427505 FW510-R12 0.42 LRK53_RS02290 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.55 LRK53_RS05725 glutathione synthase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.5407.1 GTPase and tRNA-U34 5-formylation enzyme TrmE 0.55 Xcc-8004.1501.1 Glutathione synthetase (EC 6.3.2.3) — —
Lysobacter sp. OAE881 0.39 ABIE51_RS00735 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.56 ABIE51_RS05210 glutathione synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_06625 tRNA modification GTPase 0.23 CA264_17395 glutathione synthetase — —
Rhodopseudomonas palustris CGA009 0.30 TX73_001535 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.37 TX73_001670 glutathione synthase — —
Dinoroseobacter shibae DFL-12 0.28 Dshi_3454 tRNA modification GTPase TrmE (RefSeq) 0.36 Dshi_2829 glutathione synthetase (RefSeq) — —
Sinorhizobium meliloti 1021 0.28 SMc02797 tRNA modification GTPase TrmE 0.40 SMc00419 glutathione synthetase — —
Agrobacterium fabrum C58 0.28 Atu2832 tRNA modification GTPase 0.38 Atu0310 glutathione synthetase — —
Rhizobium sp. OAE497 0.28 ABIE40_RS19220 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.39 ABIE40_RS01405 glutathione synthase low > 107
Caulobacter crescentus NA1000 0.28 CCNA_03872 tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase 0.38 CCNA_00140 glutathione synthetase — —
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_03872 tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase 0.38 CCNA_00140 glutathione synthetase — —
Xanthobacter sp. DMC5 0.28 GFF3741 tRNA modification GTPase MnmE 0.39 GFF2245 Glutathione synthetase — —
Bosea sp. OAE506 0.27 ABIE41_RS04680 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.36 ABIE41_RS03330 glutathione synthase — —
Magnetospirillum magneticum AMB-1 0.27 AMB_RS00005 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.40 AMB_RS22800 glutathione synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS13700 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.38 A4249_RS14140 glutathione synthase — —
Azospirillum brasilense Sp245 0.27 AZOBR_RS01805 tRNA modification GTPase TrmE 0.40 AZOBR_RS02170 glutathione synthetase low > 97
Rhodospirillum rubrum S1H 0.26 Rru_A3624 tRNA modification GTPase TrmE (NCBI) 0.40 Rru_A3690 Glutathione synthetase (NCBI) — —
Phaeobacter inhibens DSM 17395 0.26 PGA1_c35110 tRNA modification GTPase MnmE 0.41 PGA1_c26710 glutathione synthetase GshB — —
Azospirillum sp. SherDot2 0.26 MPMX19_02568 tRNA modification GTPase MnmE 0.40 MPMX19_02474 Glutathione synthetase — —
Synechocystis sp000284455 PCC 6803 0.26 SGL_RS08695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.36 SGL_RS06800 glutathione synthase — —
Synechococcus elongatus PCC 7942 0.26 Synpcc7942_1582 trmE tRNA modification GTPase TrmE 0.36 Synpcc7942_2324 gshB glutathione synthetase — —
Sphingobium sp. HT1-2 0.25 GFF4133 tRNA-5-carboxymethylaminomethyl-2- thiouridine(34) synthesis protein MnmE 0.36 GFF307 Glutathione synthetase (EC 6.3.2.3) — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_2204 tRNA modification GTPase trmE 0.36 Ga0059261_2757 glutathione synthase (EC 6.3.2.3) — —

Not shown: 13 genomes with orthologs for CSW01_00015 only; 0 genomes with orthologs for CSW01_02490 only