| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_00260 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 1.0 | CSW01_01015 | | DNA helicase II | 0.68 | 4 |
| Alteromonas macleodii MIT1002 | 0.46 | MIT1002_00522 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.65 | MIT1002_00153 | | DNA helicase II | low | > 70 |
| Pseudomonas sp. S08-1 | 0.37 | OH686_13380 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.59 | OH686_13045 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
| Pseudomonas stutzeri RCH2 | 0.37 | Psest_4068 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.59 | Psest_4098 | | Superfamily I DNA and RNA helicases | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.37 | Pf6N2E2_4081 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.59 | Pf6N2E2_4273 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
| Pseudomonas sp. BP01 | 0.37 | JOY50_RS08825 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.60 | JOY50_RS08735 | uvrD | DNA helicase II | — | — |
| Pseudomonas sp. RS175 | 0.37 | PFR28_04495 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.59 | PFR28_04523 | | DNA helicase II | — | — |
| Pseudomonas putida KT2440 | 0.36 | PP_5335 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.60 | PP_5352 | | DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex | — | — |
| Pseudomonas sp. SVBP6 | 0.36 | COO64_RS01745 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.60 | COO64_RS01845 | uvrD | DNA helicase II | low | > 93 |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_11075 | | phosphoribosylaminoimidazole carboxylase | 0.59 | AO356_11990 | | DNA helicase II | — | — |
| Pseudomonas sp. DMC3 | 0.36 | GFF485 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.59 | GFF512 | | DNA helicase II | low | > 89 |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_5047 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.58 | Psyr_5065 | | ATP-dependent DNA helicase UvrD | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_5047 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.58 | Psyr_5065 | | ATP-dependent DNA helicase UvrD | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.36 | PFLU_RS29800 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.59 | PFLU_RS29900 | | DNA helicase II | — | — |
| Pseudomonas fluorescens SBW25 | 0.36 | PFLU_RS29800 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.59 | PFLU_RS29900 | | DNA helicase II | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.36 | PfGW456L13_747 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.59 | PfGW456L13_724 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.35 | AO353_09935 | | phosphoribosylaminoimidazole carboxylase | 0.59 | AO353_10055 | | DNA helicase II | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.35 | Pf1N1B4_2028 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.59 | Pf1N1B4_2005 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
| Pseudomonas aeruginosa PA14 | 0.34 | IKLFDK_26300 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.60 | IKLFDK_26200 | | DNA helicase II | low | > 101 |
| Marinobacter adhaerens HP15 | 0.33 | HP15_2350 | | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.56 | HP15_3403 | | UvrD/REP helicase | — | — |
| Lysobacter sp. OAE881 | 0.32 | ABIE51_RS15390 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.55 | ABIE51_RS01985 | | DNA helicase II | low | > 62 |
| Rhodanobacter sp. FW510-T8 | 0.32 | OKGIIK_03050 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.55 | OKGIIK_16775 | | DNA helicase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.32 | Xcc-8004.2012.1 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.54 | Xcc-8004.5114.1 | | ATP-dependent DNA helicase UvrD/PcrA | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.31 | B158DRAFT_0610 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.58 | B158DRAFT_0238 | | Superfamily I DNA and RNA helicases | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.30 | LRK54_RS13815 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.54 | LRK54_RS06850 | | DNA helicase II | — | — |
| Rhodanobacter denitrificans MT42 | 0.30 | LRK55_RS13530 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.54 | LRK55_RS06595 | | DNA helicase II | — | — |
| Pectobacterium carotovorum WPP14 | 0.30 | HER17_RS06470 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.70 | HER17_RS01360 | | DNA helicase II | low | > 75 |
| Dyella japonica UNC79MFTsu3.2 | 0.30 | ABZR86_RS09830 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.55 | ABZR86_RS16965 | | DNA helicase II | — | — |
| Shewanella sp. ANA-3 | 0.29 | Shewana3_3156 | | phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) | 0.67 | Shewana3_0469 | uvrD | DNA-dependent helicase II (RefSeq) | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.29 | GFF4438 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.71 | GFF241 | | ATP-dependent DNA helicase UvrD/PcrA | low | > 78 |
| Klebsiella michiganensis M5al | 0.29 | BWI76_RS07065 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | BWI76_RS01220 | | DNA-dependent helicase II | low | > 92 |
| Serratia liquefaciens MT49 | 0.29 | IAI46_05370 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | IAI46_00735 | | DNA helicase II | low | > 86 |
| Dickeya dianthicola 67-19 | 0.29 | HGI48_RS15190 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.70 | HGI48_RS20035 | | DNA helicase II | low | > 71 |
| Shewanella amazonensis SB2B | 0.29 | Sama_1063 | | phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) | 0.66 | Sama_0419 | uvrD | DNA-dependent helicase II (RefSeq) | low | > 62 |
| Rhodanobacter sp000427505 FW510-R12 | 0.29 | LRK53_RS14785 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.53 | LRK53_RS01560 | | UvrD-helicase domain-containing protein | — | — |
| Rahnella sp. WP5 | 0.29 | EX31_RS22620 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.68 | EX31_RS15175 | | DNA helicase II | low | > 89 |
| Shewanella loihica PV-4 | 0.29 | Shew_1249 | | phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) | 0.66 | Shew_3385 | uvrD | DNA-dependent helicase II (RefSeq) | low | > 60 |
| Dickeya dianthicola ME23 | 0.29 | DZA65_RS15995 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.70 | DZA65_RS21080 | | DNA helicase II | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.28 | LU632_RS15250 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.68 | LU632_RS24125 | uvrD | DNA helicase II | — | — |
| Dickeya dadantii 3937 | 0.28 | DDA3937_RS15110 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.70 | DDA3937_RS19880 | | DNA helicase II | low | > 74 |
| Azospirillum brasilense Sp245 | 0.28 | AZOBR_RS06140 | | phosphoribosylaminoimidazole carboxylase | 0.35 | AZOBR_RS12445 | | DNA helicase II | — | — |
| Shewanella oneidensis MR-1 | 0.28 | SO3555 | purK | phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) | 0.67 | SO0467 | uvrD | DNA helicase II (NCBI ptt file) | low | > 76 |
| Enterobacter asburiae PDN3 | 0.28 | EX28DRAFT_2460 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.70 | EX28DRAFT_4482 | | ATP-dependent DNA helicase UvrD (EC 3.6.1.-) | — | — |
| Escherichia coli Nissle 1917 | 0.28 | ECOLIN_RS03025 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | ECOLIN_RS21885 | | DNA helicase II | low | > 55 |
| Pantoea sp. MT58 | 0.28 | IAI47_14355 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.69 | IAI47_18390 | | DNA helicase II | low | > 76 |
| Escherichia fergusonii Becca | 0.28 | EFB2_03540 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.71 | EFB2_04824 | | DNA helicase II | low | > 86 |
| Azospirillum sp. SherDot2 | 0.28 | MPMX19_01418 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.34 | MPMX19_01610 | | ATP-dependent DNA helicase PcrA | — | — |
| Escherichia coli ECOR27 | 0.28 | NOLOHH_00830 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | NOLOHH_06540 | uvrD | DNA helicase II | low | > 75 |
| Erwinia amylovora T8 | 0.28 | OLJFJH_17635 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.68 | OLJFJH_06425 | | DNA helicase II | low | > 58 |
| Escherichia coli ECRC101 | 0.27 | MCAODC_27060 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | MCAODC_04915 | uvrD | DNA helicase II | low | > 87 |
| Escherichia coli BW25113 | 0.27 | b0522 | purK | phosphoribosylaminoimidazole carboxylase (NCBI) | 0.71 | b3813 | uvrD | DNA-dependent ATPase I and helicase II (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.27 | OKFHMN_07840 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | OKFHMN_14410 | uvrD | DNA helicase II | low | > 80 |
| Escherichia coli ECOR38 | 0.27 | HEPCGN_06480 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | HEPCGN_13115 | uvrD | DNA helicase II | low | > 87 |
| Escherichia coli ECRC98 | 0.27 | JDDGAC_11490 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | JDDGAC_18035 | uvrD | DNA helicase II | low | > 86 |
| Escherichia coli ECRC102 | 0.27 | NIAGMN_05895 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | NIAGMN_12165 | uvrD | DNA helicase II | — | — |
| Escherichia coli ECRC99 | 0.27 | KEDOAH_20130 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | KEDOAH_13740 | uvrD | DNA helicase II | — | — |
| Escherichia coli BL21 | 0.27 | ECD_00472 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.71 | ECD_03689 | | DNA-dependent ATPase I and helicase II | — | — |
| Escherichia coli ECRC62 | 0.27 | BNILDI_22260 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.71 | BNILDI_04995 | uvrD | DNA helicase II | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.27 | OHPLBJKB_03159 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.71 | OHPLBJKB_04237 | | DNA helicase II | low | > 73 |
| Sphingomonas koreensis DSMZ 15582 | 0.27 | Ga0059261_1428 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.35 | Ga0059261_0249 | | Superfamily I DNA and RNA helicases | — | — |
| Enterobacter sp. TBS_079 | 0.27 | MPMX20_01097 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.70 | MPMX20_04463 | | DNA helicase II | low | > 85 |
| Sinorhizobium meliloti 1021 | 0.27 | SMc04002 | | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.31 | SMc01461 | | DNA helicase II protein | low | > 103 |
| Bosea sp. OAE506 | 0.26 | ABIE41_RS09245 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.35 | ABIE41_RS12730 | | UvrD-helicase domain-containing protein | 0.28 | 33 |
| Dinoroseobacter shibae DFL-12 | 0.26 | Dshi_0680 | | phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) | 0.33 | Dshi_2483 | | UvrD/REP helicase (RefSeq) | — | — |
| Rhizobium sp. OAE497 | 0.26 | ABIE40_RS16070 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.33 | ABIE40_RS11670 | | UvrD-helicase domain-containing protein | low | > 107 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.25 | GFF2770 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.42 | GFF5598 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
| Phaeobacter inhibens DSM 17395 | 0.25 | PGA1_c24870 | | phosphoribosylaminoimidazole carboxylase ATPase subunit PurK | 0.34 | PGA1_c09450 | | DNA helicase II UvrD | low | > 62 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.25 | A4249_RS08935 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.32 | A4249_RS04960 | | UvrD-helicase domain-containing protein | — | — |
| Methylophilus sp. DMC18 | 0.24 | GFF1769 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.48 | GFF1664 | | DNA helicase II | — | — |
| Magnetospirillum magneticum AMB-1 | 0.24 | AMB_RS11140 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.34 | AMB_RS03725 | | DNA helicase II | — | — |
| Variovorax sp. SCN45 | 0.24 | GFF5513 | | N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) | 0.43 | GFF4000 | | ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) | low | > 127 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.24 | H281DRAFT_04185 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.44 | H281DRAFT_04469 | | ATP-dependent DNA helicase UvrD | — | — |
| Burkholderia phytofirmans PsJN | 0.23 | BPHYT_RS16245 | | phosphoribosylaminoimidazole carboxylase | 0.45 | BPHYT_RS13840 | | DNA-dependent helicase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.23 | HSERO_RS03370 | | phosphoribosylaminoimidazole carboxylase | 0.43 | HSERO_RS02160 | | DNA-dependent helicase | — | — |
| Castellaniella sp019104865 MT123 | 0.23 | ABCV34_RS00565 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.42 | ABCV34_RS05210 | | UvrD-helicase domain-containing protein | — | — |
| Mycobacterium tuberculosis H37Rv | 0.23 | Rv3276c | | Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) | 0.33 | Rv0949 | | Probable ATP-dependent DNA helicase II UvrD1 | — | — |
| Rhodospirillum rubrum S1H | 0.23 | Rru_A1051 | | Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) | 0.32 | Rru_A1536 | | UvrD/REP helicase (NCBI) | 0.51 | 57 |
| Paraburkholderia graminis OAS925 | 0.23 | ABIE53_003423 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.45 | ABIE53_002936 | | DNA helicase-2/ATP-dependent DNA helicase PcrA | — | — |
| Variovorax sp. OAS795 | 0.23 | ABID97_RS01700 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.44 | ABID97_RS09150 | | UvrD-helicase domain-containing protein | — | — |
| Dechlorosoma suillum PS | 0.23 | Dsui_0091 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.45 | Dsui_1227 | | DNA/RNA helicase, superfamily I | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.22 | QEN71_RS02450 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.44 | QEN71_RS05110 | | 3'-5' exonuclease | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.22 | Echvi_0884 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.33 | Echvi_0292 | | Superfamily I DNA and RNA helicases | — | — |
| Acidovorax sp. GW101-3H11 | 0.22 | Ac3H11_675 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.44 | Ac3H11_1660 | | ATP-dependent DNA helicase UvrD/PcrA | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.22 | CA265_RS07745 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.31 | CA265_RS12980 | | ATP-dependent DNA helicase | — | — |
| Synechococcus elongatus PCC 7942 | 0.22 | Synpcc7942_1428 | purK | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.29 | Synpcc7942_2168 | pcrA | ATP-dependent DNA helicase, Rep family | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.21 | CA264_12600 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.31 | CA264_07795 | | ATP-dependent DNA helicase | — | — |
| Ralstonia solanacearum GMI1000 | 0.20 | RS_RS02885 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.42 | RS_RS11220 | | DNA-dependent helicase | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.20 | RR42_RS03230 | | phosphoribosylaminoimidazole carboxylase | 0.44 | RR42_RS15090 | | DNA helicase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.20 | RALBFv3_RS12200 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.42 | RALBFv3_RS03775 | | DNA-dependent helicase | — | — |
| Ralstonia solanacearum UW163 | 0.20 | UW163_RS01410 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.42 | UW163_RS09895 | | DNA-dependent helicase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.20 | ABZR87_RS08090 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.43 | ABZR87_RS15705 | | UvrD-helicase domain-containing protein | — | — |
| Ralstonia solanacearum PSI07 | 0.20 | RPSI07_RS21130 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.42 | RPSI07_RS13455 | | DNA-dependent helicase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.19 | ABZR88_RS09290 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.31 | ABZR88_RS07840 | | ATP-dependent helicase | — | — |
| Cellulophaga baltica 18 | 0.19 | M666_RS01265 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.30 | M666_RS15390 | | 3'-5' exonuclease | — | — |
| Synechocystis sp000284455 PCC 6803 | 0.19 | SGL_RS18210 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.30 | SGL_RS06660 | | DNA helicase PcrA | — | — |
Not shown: 8 genomes with orthologs for CSW01_00260 only; 9 genomes with orthologs for CSW01_01015 only